Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
Updated BioCyc iOS App now
available in iTunes store
twitter

Aquifex aeolicus VF5 Protein Class: a polypeptide

Summary:
An instance of this class describes a single protein gene product, that is, a single polypeptide chain. The polypeptide chain may have undergone post-translational modification, and it also might be part of a larger protein or other macromolecular complex (as specified by its Component-Of slot).

Child Classes: (E3-independent) E2 ubiquitin-conjugating enzyme (0), (R)-β-hydroxy-L-tyrosine-S-[NovH protein] (0), (S)-2-methylbutanoyl-[2-methylbutanoate polyketide synthase] (0), 2'-hydroxy-β-oxo-L-tyrosine-S-[NovH protein] (0), 2-methylbutanoate polyketide synthase (0), 3-hydroxyquinaldyl-D-cysteinyl-glycyl-[non-ribosomal peptide synthase] (0), 4-amino-2-(methanethioyl)-5-oxo-3-sulfanylpyrrolidine-2-carboxyl-[HlmE non-ribosomal peptide synthetase] (0), 50S ribosomal subunit protein L16 (0), a methylated corrinoid protein (0), a (2E)-2-amino-3-sulfanylprop-2-enoyl-[HlmE non-ribosomal peptide synthetase] (0), a (2E)-2-[(2E)-2-azanidyl-3-sulfanylprop-2-enamido]-3-[HlmE non-ribosomal peptide synthetase] (0), a (3S)-3-hydroxy-L-asparagine-HIF α subunit (0), a 2,3-dehydro-decanoyl-HmqF (0), a 3-hydroxy-3-methylglutaryl-CoA reductase (0), a β-adrenergic receptor (0), a β-phosphoglucomutase (0), a blue copper protein (0), a caldesmon (0), a calmodulin (0), a carboxy-adenylated small subunit of molybdopterin synthase (0), a cis-delta19-37-methoxy-38-methyl-C57:1-[acp] (0), a cis-delta21-39-oxo-40-methyl-C59:1-[acp] (0), a cleaved angiotensinogen (0), a cleaved synthetic tetradecapeptide renin (0), a cleaved type IV prepilin (0), a collagen (0), a corrinoid protein (0), a cytochrome (0), a DdaD non-ribosomal peptide synthase (0), a decanoyl-HmqF protein (0), a deoxyhypusine synthase (0), a DHB-seryl-[EntF peptidyl-carrier protein] (0), a DsrE3A thiosulfate-carrier protein (0), a factor V (0), a factor VII (0), a factor VIII (0), a factor IX (0), a factor X (0), a factor XII (0), a ferroprotein (0), a fibrin (0), a fibrinogen (0), a fibrinopeptide A (0), a fibrinopeptide B (0), a flavoprotein (0), a fucosyl-protein (0), a G protein-coupled receptor (0), a globin fragment (0), a Glu-plasminogen (0), a glutaredoxin (0), a glycine-cleavage complex H protein (0), a hemoglobin α subunit (0), a hemoglobin β subunit (0), a histone (0), a holo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)] (0), a holo-[EntF peptidyl-carrier protein] (0), a hybrid-cluster protein (0), a hydroxymethylglutaryl-CoA reductase (NADPH) (0), a HypE hydrogenase maturation protein (0), a HypE hydrogenase maturation protein-S-carboxamide (0), a hypoxia inducible factor (HIF) α subunit (0), a leader peptide (0), a leader sequence (0), a limulus clotting factor B (0), a LuxE long-chain-fatty-acid--protein ligase (0), a MadF protein (0), a mature small ubiquitin-like modifier (SUMO) peptide (0), a metaretinochrome (0), a mitogen-activated protein kinase (0), a mitogen-activated protein kinase kinase (0), a mycoredoxin (0), a myosin heavy chain (0), a NifB protein (0), a NifB protein with a K-cluster (0), a NifB protein with an L-cluster (0), a NifQ protein with a [Mo-Fe-S] cluster (0), a NovH peptidyl-carrier protein (0), a PchE non-ribosomal peptide synthase protein (0), a PchF non-ribosomal peptide synthase protein (0), a peptide (0), a peptide (3), a peptide with a leader sequence (0), a peptide with N-terminal 5-oxo-L-proline (0), a peptide with proline in the third position (0), a phosphoacetylglucosamine mutase (0), a phosphoglucomutase (0), a phosphoglucosamine mutase (0), a phosphorylase (0), a phosphorylated β-phosphoglucomutase (0), a phosphorylated mitogen-activated protein kinase kinase (0), a phosphorylated phosphoacetylglucosamine mutase (0), a phosphorylated phosphoglucomutase (0), a phosphorylated phosphoglucosamine mutase (0), a PhsA non-ribosomal peptide synthase (0), a PhsB non-ribosomal peptide synthase (0), a PhsC non-ribosomal peptide synthase (0), a PII protein (0), a poly-[γ-glutamylcysteine]-glycine (0), a polyketide synthase (0), a PqqA peptide (0), a prokaryotic ubiquitin-like protein (0), a prolipoprotein (0), a protein C (0), a protein containing an (L-serine/L-threonine)-L-proline motif (0), a protein with oxidized disulfide bonds (0), a protein with reduced sulfide groups (0), a prothrombin (0), a putidaredoxin (0), a pyruvate kinase (0), a pyruvate,phosphate dikinase (0), a quino-protein (0), a reduced transferrin (0), a release factor (0), a renin-2 heavy chain (0), a renin-2 light chain (0), a renin-2 precursor (0), a retinoid-binding protein (0), a ribosomal protein L3 (0), a ribosomal protein L11 (0), a ribosomal protein-L-alanine (0), a ribosomal protein-N-acetyl-L-alanine (0), a seryl-[EntF peptidyl-carrier protein] (0), a small archaeal modifier protein (0), a small subunit of molybdopterin synthase (0), a small ubiquitin-like modifier (SUMO) propeptide (0), a SpoIVB peptidase (0), a SpoIVB peptidase Precursor (0), a sulfatase (0), a sulfur-binding protein (0), a sulfurated [MtaB protein] (0), a sulfurylated sulfur-binding protein (0), a synthetic tetradecapeptide renin substrate (0), a tau protein (0), a ThiF protein (0), a ThiI sulfur-carrier protein (0), a thiocarboxylated small subunit of molybdopterin synthase (0), a thioredoxin (0), a ThiS sulfur-carrier protein (0), a TNF-α precursor (0), a trans-4-hydroxy-L-proline-HIF α subunit (0), a tropomyocin (0), a tubulin (0), a TusA sulfur-carrier protein (0), a TusE sulfur-carrier protein (0), a type IV prepilin (0), a ubiquitin (0), a VibF non-ribosomal peptide synthetase (0), a von willebrand factor (0), a Wnt protein (0), a [biotin-carboxyl-carrier protein monomer] (0), a [C-phycocyanin α-subunit]-Cys84-phycocyanobilin (0), a [C-phycocyanin β-subunit]-Cys82-phycocyanobilin (0), a [C-phycocyanin β-subunit]-Cys155-phycocyanobilin (0), a [C-phycoerythrin α-subunit]-Cys84-phycoerythrobilin (0), a [C-phycoerythrin β-subunit]-Cys84-phycoerythrobilin (0), a [DsrE protein] (0), a [lipoyl-carrier protein] (0), a [methionine synthase]-methylcob(I)alamin (0), a [phycoerythrocyanin α-subunit]-Cys84-phycoviolobilin (0), a [phycoerythrocyanin β-subunit]-Cys84-phycocyanobilin (0), a [phycoerythrocyanin β-subunit]-Cys155-phycocyanobilin (0), a [pyruvate,phosphate dikinase]-phosphate (0), acrosin (0), activated complement subcomponent C1s (0), active clotting enzyme (0), all acyl-carrier proteins (0), an 11-cis-retinal-[interphotoreceptor retinoid-binding protein] (0), an activated factor B (0), an active TNF-α (0), an all-trans retinal-[cellular-retinol-binding-protein] (0), an all-trans-3-hydroxyretinol-[retinoid-binding protein] (0), an all-trans-retinal-[retinal-binding protein] (0), an angiotensinogen (0), an apo NifQ protein (0), an apo-phycoerythrocyanin α-subunit (0), an apo-retinochrome (0), an apo-rhodopsin Rh1 (0), an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)] (0), an apo-[allophycocyanin α-subunit] (0), an apo-[allophycocyanin β-subunit] (0), an apo-[C-phycocyanin α-subunit] (0), an apo-[C-phycocyanin β-subunit] (0), an apo-[C-phycoerythrin α-subunit] (0), an apo-[C-phycoerythrin β-subunit] (0), an apo-[phycoerythrocyanin β-subunit] (0), an apo-[R-phycocyanin V α-subunit] (0), an apo-[VibB aryl-carrier protein] (0), an archaeal flagellin (0), an archaeal preflagellin (0), an E3-independent ubiquitin-carrier-protein E2 (0), an eIF5A protein (0), an HlmE non-ribosomal peptide synthetase (0), an HmqF protein (0), an IκB protein (0), an iron-sulfur protein (0), an L-cysteinyl-[HlmE non-ribosomal peptide synthetase] (0), an N-3-(R,R)-epoxysuccinamoyl-(S)-2,3-diaminopropanoyl-[DdaD non-ribosomal peptide synthase] (0), an N-3-fumaramoyl-(S)-2,3-diaminopropanoyl-[DdaD non-ribosomal peptide synthase] (0), an N-terminal E2 ubiquitin-conjugating enzyme (0), an Nα-acetyl-peptide (0), an O-phospho-tau protein (0), an O-phosphotropomyocin (0), an opsin (0), an oxidized putidaredoxin (0), an oxidized transferrin (0), an S-sulfanyl-[L-cysteine desulfurase] (0), an S-sulfanyl-[ThiI sulfur-carrier protein] (0), an [allophycocyanin α-subunit]-Cys84-phycocyanobilin (0), an [allophycocyanin β-subunit]-Cys84-phycocyanobilin (0), an [MtaB protein] (0), apo-[propionyl-CoA:carbon-dioxide ligase (ADP-forming)] (0), Asp-3 (0), BCCP family (0), β aspartyl peptide (0), β-oxo-L-tyrosine-S-[NovH protein] (0), cleaved flavivirus polyprotein (0), cleaved helper component proteinase (0), cleaved repressor LexA (0), complement component protein C2 (0), complement component protein C3 (0), complement component protein C4 (0), complement subcomponent C1s (0), DsbD (0), E1 ubiquitin-activating enzyme (0), eEF-2 (0), egg glycoprotein Gp41 (0), egg glycoprotein Gp43 (0), elongation-factor 2 (0), epidermal growth factor-like domain (0), Fas-activated serine/threonine protein (0), flavivirus polyprotein (0), Glc-β-EGF-like domain (0), gln protein A (0), Goodpasture antigen-binding protein (0), helper component proteinase (0), L-alanyl-[PhsB non-ribosomal peptide synthase] (0), L-tyrosine-S-[NovH protein] (0), larger subunit of tyrosine aminotransferase (0), limulus proclotting enzyme (0), lovastatin nonaketide synthase (0), mature pro-interleukin-1β (0), MFP-Family of accessory transport proteins (0), mitogen-activated protein kinase kinase (0), N-acetyl demethylphosphinothricinyl-L-alanyl-L-alanyl-[PhsC non-ribosomal peptide synthase] (0), N-acetyl demethylphosphinothricinyl-L-alanyl-L-leucyl-[PhsC non-ribosomal peptide synthase] (0), N-acetyl demethylphosphinothricinyl-L-alanyl-[PhsB non-ribosomal peptide synthase] (0), N-acetyl demethylphosphinothricinyl-[PhsA non-ribosomal peptide synthase] (0), O-β-D-GlcNAc-fucosyl-protein (0), phospho-ERK (0), phospho-[DNA-directed RNA-polymerase] (0), picornavirus polyprotein (0), picornavirus polyprotein fragment (0), poliovirus polyprotein (0), poliovirus polyprotein fragment (0), potyvirus polyprotein (0), potyvirus polyprotein fragments (0), pro-interleukin-1β (0), proacrosin (0), quinoxaline-2-carboxyl-D-seryl-L-alanyl-[non-ribosomal peptide synthase] (0), repressor LexA (0), Rhd sulfur-carrier protein (0), smaller subunit of tyrosine aminotransferase (0), type-1 transmembrane domains (0), ubiquitin transferase E3 (0), ubiquitin-conjugating enzyme E2 (0), Uhp-C (0), Xyl-α(1-3)-Glc-β-EGF-like domain (0), Xyl-α(1-3)-Xyl-α(1-3)-Glc-β-EGF-like domain (0), [a DNA-directed RNA-polymerase] (0), [a SoxY protein] (0), [glycogen synthase D] (0), [glycogen synthase I] (0), [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase (0), [LysW L-2-aminoadipate carrier protein] (0), [R-phycocyanin V α-subunit]-Cys84-phycourobilin (0), [tyrosine-3-monooxygenase] (0)

Instances:
(3R)-hydroxymyristoyl-ACP dehydratase,
(dimethylallyl)adenosine tRNA methylthiotransferase,
(p)ppGpp 3-pyrophosphohydrolase,
1,3 propanediol dehydrogenase,
1-deoxy-D-xylulose 5-phosphate reductoisomerase,
1-deoxy-D-xylulose-5-phosphate synthase,
2-acylglycerophosphoethanolamine acyltransferase,
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
2-dehydro-3-deoxyphosphooctonate aldolase,
2-isopropylmalate synthase,
3-dehydroquinate dehydratase,
3-dehydroquinate synthase,
3-deoxy-D-manno-2-octulosonate transferase,
3-deoxy-manno-octulosonate cytidylyltransferase,
3-hydroxyisobutyrate dehydrogenase,
3-isopropylmalate dehydratase,
3-isopropylmalate dehydratase large subunit,
3-isopropylmalate dehydrogenase,
3-methyl-2-oxobutanoate hydroxymethyltransferase,
3-oxoacyl-ACP reductase,
3-oxoacyl-ACP synthase,
3-oxoacyl-ACP synthase,
3-phosphoshikimate 1-carboxyvinyltransferase,
4-alpha-glucanotransferase,
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase,
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
4-hydroxybenzoate octaprenyltransferase,
5,10-methylenetetrahydrofolate reductase,
5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase,
6,7-dimethyl-8-ribityllumazine synthase,
6-carboxyhexanoate--CoA ligase,
6-phosphofructokinase,
6-phosphogluconate dehydrogenase,
7-cyano-7-deazaguanine reductase,
8-amino-7-oxononanoate synthase,
8-oxo-dGTPase domain-containing protein,
30S ribosomal protein S2,
30S ribosomal protein S3,
30S ribosomal protein S4,
30S ribosomal protein S5,
30S ribosomal protein S6,
30S ribosomal protein S7,
30S ribosomal protein S7,
30S ribosomal protein S9,
30S ribosomal protein S10,
30S ribosomal protein S11,
30S ribosomal protein S12,
30S ribosomal protein S12,
30S ribosomal protein S13,
30S ribosomal protein S14,
30S ribosomal protein S15,
30S ribosomal protein S16,
30S ribosomal protein S17,
30S ribosomal protein S18,
30S ribosomal protein S19,
30S ribosomal protein S20,
30S ribosomal protein S21,
50S ribosomal protein L1,
50S ribosomal protein L2,
50S ribosomal protein L3,
50S ribosomal protein L4,
50S ribosomal protein L5,
50S ribosomal protein L6,
50S ribosomal protein L7/L12,
50S ribosomal protein L9,
50S ribosomal protein L10,
50S ribosomal protein L11,
50S ribosomal protein L11 methyltransferase,
50S ribosomal protein L13,
50S ribosomal protein L14,
50S ribosomal protein L15,
50S ribosomal protein L16,
50S ribosomal protein L17,
50S ribosomal protein L18,
50S ribosomal protein L19,
50S ribosomal protein L20,
50S ribosomal protein L21,
50S ribosomal protein L22,
50S ribosomal protein L23,
50S ribosomal protein L24,
50S ribosomal protein L27,
50S ribosomal protein L28,
50S ribosomal protein L29,
50S ribosomal protein L30,
50S ribosomal protein L31,
50S ribosomal protein L32,
50S ribosomal protein L33,
50S ribosomal protein L34,
50S ribosomal protein L35,
50S ribosomal protein L36,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
ABC transporter,
acetoin utilization protein,
acetoin utilization protein,
acetolactate synthase,
acetolactate synthase large subunit,
acetyl-CoA carboxylase subunit alpha,
acetyl-CoA carboxyltransferase subunit beta,
acetylglutamate kinase,
acetylornithine aminotransferase,
acetyltransferase,
aconitate hydratase,
AcrB/AcrD/AcrF family cation efflux protein,
AcrB/AcrD/AcrF family cation efflux protein,
AcrB/AcrD/AcrF family cation efflux protein,
AcrB/AcrD/AcrF family cation efflux protein,
acriflavin resistance protein AcrE,
acyl carrier protein,
adenylate kinase,
adenylosuccinate lyase,
adenylosuccinate synthetase,
adhesion B,
adhesion protein,
ADP-heptose synthase,
ADP-heptose--LPS heptosyltransferase,
ADP-heptose--LPS heptosyltransferase,
ADP-L-glycero-D-manno-heptose-6-epimerase,
ADP-ribosylglycohydrolase,
alanine racemase,
alanyl-tRNA synthetase,
alcohol dehydrogenase,
alcohol dehydrogenase,
aldehyde dehydrogenase,
aldehyde dehydrogenase,
alginate synthesis-related protein,
alkyl hydroperoxide reductase,
alkyl hydroperoxide reductase,
alpha-isopropylmalate/homocitrate synthase family transferase,
amidophosphoribosyltransferase,
aminodeoxychorismate lyase,
aminotransferase,
aminotransferase,
ammonium transporter,
anion transporting ATPase,
anion transporting ATPase,
anthranilate phosphoribosyltransferase,
anthranilate synthase component I,
anthranilate synthase component II,
anti sigma factor FlgM,
AP4A hydrolase,
apolipoprotein N-acyltransferase,
argininosuccinate lyase,
argininosuccinate synthase,
arginyl-tRNA synthetase,
arsenate reductase,
ArsR family transcriptional regulator,
aspartate alpha-decarboxylase,
aspartate aminotransferase,
aspartate carbamoyltransferase,
aspartate-semialdehyde dehydrogenase,
aspartokinase,
aspartyl-tRNA synthetase,
aspartyl/glutamyl-tRNA amidotransferase subunit A,
aspartyl/glutamyl-tRNA amidotransferase subunit B,
ATP phosphoribosyltransferase,
ATP synthase F0 subunit a,
ATP synthase F0 subunit b,
ATP synthase F0 subunit b,
ATP synthase F0 subunit c,
ATP synthase F1 subunit delta,
ATP synthase F1 subunit epsilon,
ATP synthase F1 subunit gamma,
ATP-dependent Clp protease,
ATP-dependent Clp protease proteolytic subunit,
ATP-dependent DNA helicase RecG,
ATP-dependent DNA helicase REP,
ATP-dependent DNA ligase,
ATP-dependent dsDNA exonuclease,
ATP-dependent helicase DinG,
ATP-dependent protease ATP-binding subunit ClpX,
ATP-dependent protease ATP-binding subunit HslU,
ATP-dependent protease peptidase subunit,
ATPase AAA,
ATPase subunit of ATP-dependent protease,
bacterioferritin comigratory protein,
beta 1,4 glucosyltransferase,
beta lactamase,
beta lactamase,
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase,
bifunctional phosphoglucose/phosphomannose isomerase,
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP,
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase,
bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein,
biopolymer transport exbB,
biopolymer transport ExbD,
biotin carboxyl carrier protein,
biotin carboxylase,
biotin carboxylase,
biotin synthetase,
biotin [acetyl-CoA-carboxylase] ligase,
branched-chain amino acid aminotransferase,
C-terminal fumarate hydratase, class I,
capsular polysaccharide biosynthsis protein,
carbamoyl phosphate synthase small subunit,
carbamoyl-phosphate synthase large subunit,
carbamoyl-phosphate synthase large subunit,
carbon starvation protein A,
carboxyl-terminal protease,
cation efflux system CzcB-like protein,
cation efflux system CzcB-like protein,
cation efflux system CzcB-like protein,
cation efflux system CzcD-like protein,
cation transporter E1-E2 family ATPase,
cation transporter E1-E2 family ATPase,
cation transporter E1-E2 family ATPase,
cell cycle protein MesJ,
cell division protein FtsA,
cell division protein FtsH,
cell division protein FtsW,
cell division protein FtsY,
cell division protein FtsZ,
cellulose synthase catalytic subunit,
cellulose synthase regulator protein,
chaperone DnaJ,
chaperone DnaJ,
chaperonin GroEL,
chorismate mutase/prephenate dehydratase,
chorismate synthase,
chromosome assembly protein,
chromosome replication initiator protein DnaA,
citrate synthase,
cobalamin synthesis related protein CobW,
cofactor-independent phosphoglycerate mutase,
cold shock protein,
collagenase,
copper chaperone,
coproporphyrinogen III oxidase,
Crp family transcriptional regulator,
CTP synthetase,
cyanate hydratase,
cyclopropane-fatty-acyl-phospholipid synthase,
CysQ protein,
cysteine synthase, O-acetylserine (thiol) lyase B,
cysteinyl-tRNA synthetase,
cytidylate kinase,
cytochrome b,
cytochrome C,
cytochrome C biogenesis protein,
cytochrome C biogenesis protein,
cytochrome C oxidase assembly factor,
cytochrome C oxidase subunit I,
cytochrome C oxidase subunit II,
cytochrome C oxidase subunit III,
cytochrome C peroxidase,
cytochrome C-type biogenesis protein,
cytochrome C552,
cytochrome C552,
cytochrome oxidase d subunit I,
cytochrome oxidase d subunit II,
cytoplasmic axial filament protein,
D-3-phosphoglycerate dehydrogenase,
D-alanine--D-alanine ligase,
D-lactate dehydrogenase,
D-lactate dehydrogenase,
D-tyrosyl-tRNA(Tyr) deacylase,
DAPA aminotransferase,
DegT/DnrJ/Eryc1 family transcriptional regulator,
dehydrogenase,
delta-aminolevulinic acid dehydratase,
deoxycytidine triphosphate deaminase,
deoxyribonuclease IV,
deoxyribonucleotide triphosphate pyrophosphatase,
deoxyribose-phosphate aldolase,
deoxyuridine 5'triphosphate nucleotidohydrolase,
dethiobiotin synthetase,
diaminopimelate decarboxylase,
diaminopimelate epimerase,
dihydrodipicolinate reductase,
dihydrodipicolinate synthase,
dihydrolipoamide dehydrogenase,
dihydroorotase,
dihydroorotate dehydrogenase 1B,
dihydroorotate dehydrogenase electron transfer subunit,
dihydropteroate synthase,
dihydroxy-acid dehydratase,
dimethyladenosine transferase,
dimethylsulfoxide reductase subunit A,
dimethylsulfoxide reductase subunit B,
dimethylsulfoxide reductase subunit C,
DMSO reductase subunit B,
DNA binding protein HU,
DNA gyrase A subunit,
DNA helicase,
DNA ligase,
DNA mismatch repair protein MutL,
DNA mismatch repair protein MutS,
DNA mismatch repair protein MutS,
DNA polymerase beta family protein,
DNA polymerase I,
DNA polymerase I (PolI),
DNA polymerase III subunit alpha,
DNA polymerase III subunit beta,
DNA polymerase III subunit epsilon,
DNA polymerase III subunit gamma,
DNA primase,
DNA repair protein RadA,
DNA repair protein RadC,
DNA replication protein DnaC,
DNA-binding/iron metalloprotein/AP endonuclease,
DNA-directed RNA polymerase subunit alpha,
DNA-directed RNA polymerase subunit beta,
dnaK suppressor protein,
dolichol-phosphate mannosyltransferase,
elongation factor G,
elongation factor P,
elongation factor SelB,
elongation factor Ts,
elongation factor Tu,
elongation factor Tu,
endoglucanase fragment,
endonuclease III,
endonuclease III,
endonuclease III,
enolase-phosphatase E-1,
enoyl-ACP reductase,
erythrocyte band 7-like protein,
excinuclease ABC subunit A,
excinuclease ABC subunit B,
excinuclease ABC subunit C,
exopolyphosphatase,
extracellular solute binding protein,
F0F1 ATP synthase subunit alpha,
F0F1 ATP synthase subunit beta,
F0F1 ATP synthase subunit gamma,
Fe/Mn family superoxide dismutase,
ferredoxin,
ferredoxin,
ferredoxin,
ferredoxin oxidoreductase subunit alpha,
ferredoxin oxidoreductase subunit alpha,
ferredoxin oxidoreductase subunit beta,
ferredoxin oxidoreductase subunit beta,
ferredoxin oxidoreductase subunit gamma,
ferredoxin oxidoreductase subunit gamma,
ferrochelatase,
ferrous iron transport protein B,
FeS cluster formation protein NifS,
FeS cluster formation protein NifS,
fimbrial assembly protein PilC,
fimbrial assembly protein PilC2,
flagellar basal body P-ring protein,
flagellar basal body rod protein FlgB,
flagellar biosynthesis FlgC,
flagellar biosynthesis FlhF,
flagellar biosynthesis FliL,
flagellar biosynthesis protein FliP,
flagellar biosynthesis protein FliQ,
flagellar biosynthetic protein FlhB,
flagellar biosynthetic protein FliR,
flagellar export protein,
flagellar export protein,
flagellar hook assembly protein,
flagellar hook associated protein FlgK,
flagellar hook associated protein FlgL,
flagellar hook associated protein FliD,
flagellar hook basal-body protein FlgG,
flagellar hook basal-body protein FlgG,
flagellar hook protein FlgE,
flagellar hook-basal body protein,
flagellar L-ring protein FlgH,
flagellar M-ring protein,
flagellar motor protein MotA,
flagellar motor protein MotB,
flagellar motor protein MotB-like,
flagellar protein FlgA,
flagellar protein FliS,
flagellar switch protein FliG,
flagellar switch protein FliN,
flagellin,
flavocytochrome C sulfide dehydrogenase,
flavodoxin,
flavohemoprotein,
folate biosynthesis 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase,
folylpolyglutamate synthetase,
formate dehydrogenase formation protein FdhE,
formate dehydrogenase subunit alpha,
formate dehydrogenase subunit beta,
formate dehydrogenase subunit gamma,
formyltetrahydrofolate deformylase,
fructose-1,6-bisphosphate aldolase class II,
fructose-bisphosphate aldolase,
fuculose-1-phosphate aldolase,
fumarate hydratase,
fumarate reductase flavoprotein subunit,
fumarate reductase iron-sulfur subunit,
fumarate reductase iron-sulfur subunit,
FUR family transcriptional regulator,
FUR family transcriptional regulator,
gamma-glutamyl kinase,
gamma-glutamyl phosphate reductase,
GDP-D-mannose dehydratase,
general secretion pathway protein D,
general secretion pathway protein E,
general secretion pathway protein G,
geranylgeranyl pyrophosphate synthase,
gliding motility protein,
glucosamine--fructose-6-phosphate aminotransferase,
glucose inhibited division protein B,
glucose-1-phosphate thymidylyltransferase,
glucose-6-phosphate 1-dehydrogenase,
glucosyl transferase I,
glutamate racemase,
glutamate synthase,
glutamate synthase small subunit GltD,
glutamate-1-semialdehyde aminotransferase,
glutamine synthetase,
glutamyl-tRNA (Gln) amidotransferase subunit C,
glutamyl-tRNA reductase,
glutamyl-tRNA synthetase,
glutaredoxin-like protein,
glyceraldehyde-3-phosphate dehydrogenase,
glycerol kinase,
glycerol-3-phosphate acyltransferase,
glycerol-3-phosphate cytidyltransferase,
glycerol-3-phosphate cytidyltransferase,
glycerol-3-phosphate dehydrogenase,
glycine cleavage system protein H,
glycine cleavage system protein H,
glycine cleavage system protein H,
glycine cleavage system protein H,
glycine cleavage system protein H,
glycine dehydrogenase subunit 1,
glycine dehydrogenase subunit 2,
glycogen branching enzyme,
glycogen phosphorylase,
glycogen synthase,
glycyl-tRNA synthetase subunit alpha,
glycyl-tRNA synthetase subunit beta,
GMP synthase,
GTP cyclohydrolase I,
GTP cyclohydrolase II,
GTP-binding protein EngA,
GTP-binding protein Era,
GTP-binding protein HflX,
GTP-binding protein LepA,
GTP-dependent nucleic acid-binding protein EngD,
GTPase ObgE,
gyrase B,
heat shock protein GrpE,
heat shock protein X,
heme O oxygenase,
hemolysin,
hemolysin,
hemolysin,
hemolysin homolog protein,
heterodisulfide reductase,
heterodisulfide reductase subunit A,
heterodisulfide reductase subunit B,
heterodisulfide reductase subunit C,
high affinity sulfate transporter,
histidine kinase sensor protein,
histidine kinase sensor protein,
histidine kinase sensor protein,
histidine kinase sensor protein,
histidinol dehydrogenase,
histidinol-phosphate aminotransferase,
histidyl-tRNA synthetase,
histidyl-tRNA synthetase,
HMP-P kinase,
holo-ACP synthase,
homoserine dehydrogenase,
homoserine kinase,
host factor I,
HupD hydrogenase related function,
HupE hydrogenase related function,
hydrogenase accessory protein HypA,
hydrogenase expression/formation protein,
hydrogenase expression/formation protein B,
hydrogenase expression/formation protein HypD,
hydrogenase large subunit,
hydrogenase large subunit,
hydrogenase large subunit,
hydrogenase regulation HoxX,
hydrogenase small subunit,
hydrogenase small subunit,
hydrogenase small subunit,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypothetical protein,
hypoxanthine-guanine phosphoribosyltransferase,
IclR family transcriptional regulator,
imidazole glycerol phosphate synthase subunit HisF,
imidazole glycerol phosphate synthase subunit HisH,
imidazoleglycerol-phosphate dehydratase,
indole-3-glycerol-phosphate synthase,
initiation factor eIF-2B subunit alpha,
inorganic pyrophosphatase,
inosine monophosphate dehydrogenase,
integrase protein,
integration host factor subunit beta,
invasion protein IagB,
isocitrate dehydrogenase,
isoleucyl-tRNA synthetase,
K+ transport protein,
ketol-acid reductoisomerase,
L-aspartate oxidase,
leucyl aminopeptidase,
leucyl-tRNA synthetase,
leucyl-tRNA synthetase,
lipid A disaccharide synthetase,
lipoate-protein ligase A,
lipopolysaccharide core biosynthesis protein,
lipoprotein,
lipoprotein NlpD fragment,
lipoprotein signal peptidase,
lipoyl synthase,
LL-diaminopimelate aminotransferase,
Lon protease,
long-chain-fatty-acid CoA ligase,
LysR family transcriptional regulator,
LysR family transcriptional regulator,
lysyl-tRNA synthetase,
lysyl-tRNA synthetase,
LytB protein,
MAF protein,
major facilitator family transporter,
major facilitator transporter,
malate dehydrogenase,
malate dehydrogenase,
malonyl-CoA:ACP transacylase,
mannose-1-phosphate guanyltransferase,
mannose-6-phosphate isomerase/mannose-1-phosphate guanyl transferase,
mannosyltransferase A,
mannosyltransferase B,
mannosyltransferase C,
MerR family transcriptional regulator,
methionyl aminopeptidase,
methionyl-tRNA formyltransferase,
methionyl-tRNA synthetase subunit alpha,
methionyl-tRNA synthetase subunit beta,
methylenetetrahydrofolate dehydrogenase,
methylthioribulose-1-phosphate dehydratase,
Mg(2+) and Co(2+) transport protein,
Mg(2+) transport ATPase,
minor pilin,
MoaD family protein,
molecular chaperone DnaK,
molybdate periplasmic binding protein,
molybdenum ABC transporter permease,
molybdenum cofactor biosynthesis moaC,
molybdenum cofactor biosynthesis protein A,
molybdenum cofactor biosynthesis protein A,
molybdenum cofactor biosynthesis protein MogA,
molybdopterin biosynthesis protein MoeB,
molybdopterin converting factor subunit 2,
molybdopterin converting factor, small subunit,
molybdopterin-guainine dinucleotide biosynthesis protein B,
molybdopterin-guanine dinucleotide biosynthesis protein MobA,
myo-inositol-1(or 4)-monophosphatase,
N(2),N(2)-dimethylguanosine tRNA methyltransferase,
N-acetyl-gamma-glutamylphosphate reductase,
N-acetylmuramoyl-L-alanine amidase,
N-ethylammeline chlorohydrolase,
N-glycosylase/DNA lyase,
N-methylhydantoinase A,
N-methylhydantoinase B,
N-terminus of phage SPO1 DNA polymerase,
Na(+)/H(+) antiporter,
Na(+)/H(+) antiporter,
Na(+)/H(+) antiporter,
NAD synthetase,
NADH dehydrogenase (ubiquinone),
NADH dehydrogenase I subunit A,
NADH dehydrogenase I subunit A,
NADH dehydrogenase I subunit D,
NADH dehydrogenase I subunit D,
NADH dehydrogenase I subunit E,
NADH dehydrogenase I subunit F,
NADH dehydrogenase I subunit G,
NADH dehydrogenase I subunit H,
NADH dehydrogenase I subunit I,
NADH dehydrogenase I subunit I,
NADH dehydrogenase I subunit J,
NADH dehydrogenase I subunit J,
NADH dehydrogenase I subunit K,
NADH dehydrogenase I subunit K,
NADH dehydrogenase I subunit L,
NADH dehydrogenase I subunit L,
NADH dehydrogenase I subunit L,
NADH dehydrogenase I subunit M,
NADH dehydrogenase I subunit M,
NADH dehydrogenase I subunit N,
NADH dehydrogenase I subunit N,
NADH dehydrogenase subunit B,
NADH oxidase,
NagC/XylR family transcriptional regulator,
neutral protease,
Ni/Fe hydrogenase B-type cytochrome subunit,
nicotinate phosphoribosyltransferase,
NifA family transcriptional regulator,
NifU protein,
nitrate reductase narB,
nitrate transporter,
nitrite reductase (NAD(P)H) large subunit,
nitrogen regulatory PII protein,
nitrogen-fixing protein NifU,
nodulation competitiveness protein NfeD,
NTPase,
NtrC family transcriptional regulator,
NtrC family transcriptional regulator,
NtrC family transcriptional regulator,
NtrC family transcriptional regulator,
nucleoside diphosphate kinase,
nucleotide sugar dehydrogenase,
nucleotide sugar epimerase,
O-6-methylguanine-DNA-alkyltransferase,
O-methyltransferase,
octoprenyl-diphosphate synthase,
oligopeptide transport system permease,
organic solvent tolerance protein,
ornithine carbamoyltransferase,
ornithine decarboxylase,
orotidine-5'-phosphate decarboxylase,
outer membrane protein,
outer membrane protein c,
oxido/reductase iron sulfur protein,
oxygen-independent coproporphyrinogen III oxidase,
p-aminobenzoate synthetase,
pantothenate metabolism flavoprotein,
pantothenate synthetase,
penicillin binding protein 1A,
penicillin binding protein 2,
penicillin binding protein 2,
peptide chain release factor 1,
peptide chain release factor 2,
peptide maturation,
peptidoglycan associated lipoprotein,
peptidyl-tRNA hydrolase,
periplasmic cell division protein SufI,
periplasmic divalent cation tolerance protein,
periplasmic serine protease,
phenylacrylic acid decarboxylase,
phenylalanyl-tRNA synthetase subunit alpha,
phenylalanyl-tRNA synthetase subunit beta,
PhoB family transcriptional regulator,
phosphate ABC transporter permease,
phosphate ABC transporter permease,
phosphate starvation-inducible protein,
phosphate transport ATP binding protein,
phosphate-binding periplasmic protein,
phosphatidate cytidylyltransferase,
phospho-N-acetylmuramoyl-pentapeptide- transferase,
phosphodiesterase,
phosphoenolpyruvate synthase,
phosphoglucomutase/phosphomannomutase,
phosphoglycerate kinase,
phosphoglycerate mutase,
phosphoglycerate mutase,
phosphoglycolate phosphatase,
phosphoheptose isomerase,
phosphopyruvate hydratase,
phosphoribosyl anthranilate isomerase,
phosphoribosylamine--glycine ligase,
phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole carboxylase ATPase subunit,
phosphoribosylaminoimidazole synthetase,
phosphoribosylaminoimidazole-succinocarboxamide synthase,
phosphoribosylanthranilate transferase,
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase,
phosphoribosylformylglycinamidine (FGAM) synthase subunit PurS,
phosphoribosylformylglycinamidine synthase I,
phosphoribosylformylglycinamidine synthase II,
phosphoribosylglycinamide formyltransferase,
phosphoribosylpyrophosphate synthetase,
phosphotidylglycerophosphate synthase,
phosphotidylglycerophosphate synthase,
PhoU family transcriptional regulator,
PII-like protein GlnBi,
pilin,
pilin,
pilin,
poly A polymerase,
poly A polymerase,
polynucleotide phosphorylase/polyadenylase,
polypeptide deformylase,
polysaccharide biosynthesis protein,
polysaccharide biosynthesis protein (fragment),
polysialic acid capsule expression protein,
porphobilinogen deaminase,
potassium channel protein,
prefoldin subunit alpha,
prephenate dehydrogenase,
preprotein translocase subunit SecA,
preprotein translocase subunit SecE,
preprotein translocase subunit SecY,
processing protease,
processing protease,
prolipoprotein diacylglyceryl transferase,
prolyl-tRNA synthetase,
protease I,
protein export membrane protein SecD,
protein export membrane protein SecG,
protein kinase C inhibitor,
protein-export membrane protein,
proteinase IV,
proton/sodium-glutamate symport protein,
protoporphyrinogen oxidase,
protoporphyrinogen oxidase,
pseudouridine synthase I,
pterin-4a-carbinolamine dehydratase,
purine nucleoside phosphorylase,
pyrazinamidase/nicotinamidase,
pyridoxal phosphate biosynthetic protein PdxA,
pyridoxine 5'-phosphate synthase,
pyrroline carboxylate reductase,
pyruvate carboxylase N-terminal domain-containing protein,
pyruvate carboxylase subunit B,
pyruvate carboxylase subunit B,
queuine tRNA-ribosyltransferase,
quinolinate phosphoribosyl transferase,
quinolinate synthetase,
rare lipoprotein A,
rare lipoprotein A,
recombinase A,
recombination protein RecN,
recombination protein RecR,
replicative DNA helicase,
response regulator SirA,
reverse gyrase,
reverse gyrase,
riboflavin kinase,
riboflavin specific deaminase,
riboflavin specific deaminase,
riboflavin synthase subunit alpha,
ribonuclease PH,
ribonucleotide reductase subunit alpha,
ribonucleotide reductase subunit beta,
ribose 5-phosphate isomerase B,
ribosomal protein S01,
ribosomal protein S08,
ribosomal RNA large subunit methyltransferase N,
ribosomal-protein-alanine acetyltransferase,
ribosome recycling factor,
ribosome-binding factor A,
ribulose-5-phosphate 3-epimerase,
Rieske-I iron sulfur protein,
Rieske-I iron sulfur protein,
RNA 3'-terminal-phosphate cyclase,
RNA methyltransferase,
RNA polymerase sigma factor FliA,
RNA polymerase sigma factor RpoD,
RNA polymerase sigma factor RpoN,
RNA polymerase sigma factor RpoS,
RNA polymerase subunit beta',
RNA polymerase subunit omega,
RNase HII,
RNase III,
rod shape determining protein RodA,
rod shape-determining protein MreB,
rod shape-determining protein MreC,
rRNA methylase,
rRNA methylase SpoU,
S-adenosyl-L-homocysteine hydrolase,
S-adenosyl-methyltransferase MraW,
S-adenosylmethionine decarboxylase,
S-adenosylmethionine synthetase,
S-adenosylmethionine synthetase,
S-adenosylmethionine:tRNA ribosyltransferase-isomerase,
selenocysteine synthase,
selenophosphate synthase,
septum site-determining protein MinC,
septum site-determining protein MinD,
septum site-determining protein MinD,
Ser/thr protein kinase,
serine hydroxymethyltransferase,
serine protease,
seryl-tRNA synthetase,
shikimate 5-dehydrogenase,
shikimate kinase,
signal recognition particle receptor protein,
single stranded DNA-binding protein,
SirA family protein,
siroheme synthase,
small heat shock protein (class I),
SNF family Na(+)/neurotransmitter symporter,
sodium bile acid symporter family Na(+) dependent transporter,
spermidine synthase,
spermidine synthase,
spore coat polysaccharide biosynthesis protein SpsK,
ssDNA-specific exonuclease RecJ,
SsrA-binding protein,
stationary phase survival protein SurE,
succinyl-CoA ligase subunit alpha,
succinyl-CoA ligase subunit alpha,
succinyl-CoA ligase subunit beta,
succinyl-CoA synthetase subunit beta,
succinyl-diaminopimelate desuccinylase,
sugar fermentation stimulation protein,
sulfide dehydrogenase, flavoprotein subunit,
sulfide-quinone reductase,
sulfur carrier protein ThiS,
sulfur oxidation protein SoxB,
sulfur oxygenase reductase,
superoxide dismutase (Cu/Zn),
superoxide dismutase (Cu/Zn),
TetR/AcrR family transcriptional regulator,
TetR/AcrR family transcriptional regulator,
TetR/AcrR family transcriptional regulator,
thermococcal nuclease-like protein,
thiamine biosynthesis protein ThiC,
thiamine biosynthesis sulfur transfer protein,
thiamine monophosphate kinase,
thiamine phosphate synthase,
thiamine-phosphate pyrophosphorylase,
thiazole synthase,
thiol disulfide interchange protein,
thiol peroxidase,
thiol:disulfide interchange protein,
thioredoxin,
thioredoxin,
thioredoxin reductase,
thiosulfate sulfurtransferase,
thiosulfate sulfurtransferase,
threonine synthase,
threonine synthase,
threonyl-tRNA synthetase,
thymidylate kinase,
thymidylate synthase complementing protein,
TldD protein,
TolQ-like protein,
topoisomerase I,
trans-regulatory protein ExsB,
transcription antitermination protein NusB,
transcription antitermination protein NusG,
transcription elongation factor NusA,
transcription termination factor Rho,
transcriptional regulatory protein HypF,
transketolase,
translaldolase,
translation initiation factor IF-1,
translation initiation factor IF-2,
translation initiation factor IF-3,
transporter,
transporter,
trigger factor,
triosephosphate isomerase,
tRNA (uracil-5-)-methyltransferase Gid,
tRNA delta(2)-isopentenylpyrophosphate transferase,
tRNA guanine-N1 methyltransferase,
tRNA modification GTPase TrmE,
tRNA pseudouridine 55 synthase,
tRNA pseudouridine synthase D,
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA,
tRNA-specific 2-thiouridylase MnmA,
tryptophan synthase subunit alpha,
tryptophan synthase subunit beta,
tryptophan synthase subunit beta,
tryptophanyl-tRNA synthetase,
twitching mobility protein,
twitching motility protein PilT,
type 4 prepilin peptidase,
type IV pilus assembly protein TapB,
type-I signal peptidase,
tyrosyl-tRNA synthetase,
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase,
UDP-glucose pyrophosphorylase,
UDP-glucose-4-epimerase,
UDP-MurNAc-pentapeptide sythetase,
UDP-MurNac-tripeptide synthetase,
UDP-N-acetoenolpyruvoylglucosamine reductase,
UDP-N-acetylenolpyruvoylglucosamine reductase,
UDP-N-acetylglucosamine 1-carboxyvinyltransferase,
UDP-N-acetylglucosamine acyltransferase,
UDP-N-acetylglucosamine pyrophosphorylase,
UDP-N-acetylmuramate-alanine ligase,
UDP-N-acetylmuramoylalanine-D-glutamate ligase,
UDP-phosphate-alpha-N- acetylglucosaminyltransferase,
UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase,
undecaprenol kinase,
uracil phosphoribosyltransferase,
uridine 5-monophosphate synthase,
uridylate kinase,
uroporphyrin-III c-methyltransferase,
uroporphyrinogen decarboxylase,
uroporphyrinogen-III synthase,
VacB/RNase II family 3'-5' exoribonuclease,
valyl-tRNA synthetase,
virulence factor MviB,
xaa-pro dipeptidase


References

Agarwal12: Agarwal A, Kahyaoglu C, Hansen DB (2012). "Characterization of HmqF, a protein involved in the biosynthesis of unsaturated quinolones produced by Burkholderia thailandensis." Biochemistry 51(8);1648-57. PMID: 22320268

Bader00: Bader MW, Xie T, Yu CA, Bardwell JC (2000). "Disulfide bonds are generated by quinone reduction." J Biol Chem 275(34);26082-8. PMID: 10854438

Bagchi05: Bagchi A, Ghosh TC (2005). "A structural study towards the understanding of the interactions of SoxY, SoxZ, and SoxB, leading to the oxidation of sulfur anions via the novel global sulfur oxidizing (sox) operon." Biochem Biophys Res Commun 335(2);609-15. PMID: 16084835

Bardy03: Bardy SL, Jarrell KF (2003). "Cleavage of preflagellins by an aspartic acid signal peptidase is essential for flagellation in the archaeon Methanococcus voltae." Mol Microbiol 50(4);1339-47. PMID: 14622420

Begley99: Begley TP, Downs DM, Ealick SE, McLafferty FW, Van Loon AP, Taylor S, Campobasso N, Chiu HJ, Kinsland C, Reddick JJ, Xi J (1999). "Thiamin biosynthesis in prokaryotes." Arch Microbiol 1999;171(5);293-300. PMID: 10382260

Bishop87: Bishop JE, Rapoport H, Klotz AV, Chan CF, Glazer AN, Fueglistaller P, Zuber H (1987). "Chromopeptides from phycoerythrocyanin. Structure and linkage of the three bilin groups." Journal of the American Chemical Society 109(3);875-881.

Byers07: Byers DM, Gong H (2007). "Acyl carrier protein: structure-function relationships in a conserved multifunctional protein family." Biochem Cell Biol 85(6);649-62. PMID: 18059524

Cho07: Cho SH, Porat A, Ye J, Beckwith J (2007). "Redox-active cysteines of a membrane electron transporter DsbD show dual compartment accessibility." EMBO J 26(15);3509-20. PMID: 17641688

Cho09: Cho SH, Beckwith J (2009). "Two snapshots of electron transport across the membrane: insights into the structure and function of DsbD." J Biol Chem 284(17);11416-24. PMID: 19258316

Cort08: Cort JR, Selan U, Schulte A, Grimm F, Kennedy MA, Dahl C (2008). "Allochromatium vinosum DsrC: solution-state NMR structure, redox properties, and interaction with DsrEFH, a protein essential for purple sulfur bacterial sulfur oxidation." J Mol Biol 382(3);692-707. PMID: 18656485

Cowan93: Cowan SW, Newcomer ME, Jones TA (1993). "Crystallographic studies on a family of cellular lipophilic transport proteins. Refinement of P2 myelin protein and the structure determination and refinement of cellular retinol-binding protein in complex with all-trans-retinol." J Mol Biol 230(4);1225-46. PMID: 7683727

Cushman67: Cushman DW, Tsai RL, Gunsalus IC (1967). "The ferroprotein component of a methylene hydroxylase." Biochem Biophys Res Commun 26(5);577-83. PMID: 4383050

Dahl05: Dahl C, Engels S, Pott-Sperling AS, Schulte A, Sander J, Lubbe Y, Deuster O, Brune DC (2005). "Novel genes of the dsr gene cluster and evidence for close interaction of Dsr proteins during sulfur oxidation in the phototrophic sulfur bacterium Allochromatium vinosum." J Bacteriol 187(4);1392-404. PMID: 15687204

Dahl07: Dahl C, Schulte A, Shin DH (2007). "Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of DsrEFH from Allochromatium vinosum." Acta Crystallogr Sect F Struct Biol Cryst Commun 63(Pt 10);890-2. PMID: 17909298

Dahl08: Dahl C, Schulte A, Stockdreher Y, Hong C, Grimm F, Sander J, Kim R, Kim SH, Shin DH (2008). "Structural and molecular genetic insight into a widespread sulfur oxidation pathway." J Mol Biol 384(5);1287-300. PMID: 18952098

Dahl13: Dahl C, Franz B, Hensen D, Kesselheim A, Zigann R (2013). "Sulfite oxidation in the purple sulfur bacterium Allochromatium vinosum: identification of SoeABC as a major player and relevance of SoxYZ in the process." Microbiology 159(Pt 12);2626-38. PMID: 24030319

Davies92: Davies MD, Sligar SG (1992). "Genetic variants in the putidaredoxin-cytochrome P-450cam electron-transfer complex: identification of the residue responsible for redox-state-dependent conformers." Biochemistry 31(46);11383-9. PMID: 1445875

Durant05: Durant PC, Bajji AC, Sundaram M, Kumar RK, Davis DR (2005). "Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A." Biochemistry 44(22);8078-89. PMID: 15924427

Dyson90: Dyson HJ, Gippert GP, Case DA, Holmgren A, Wright PE (1990). "Three-dimensional solution structure of the reduced form of Escherichia coli thioredoxin determined by nuclear magnetic resonance spectroscopy." Biochemistry 1990;29(17);4129-36. PMID: 2193685

Eklund84: Eklund H, Cambillau C, Sjoberg BM, Holmgren A, Jornvall H, Hoog JO, Branden CI (1984). "Conformational and functional similarities between glutaredoxin and thioredoxins." EMBO J 1984;3(7);1443-9. PMID: 6378624

Fong84: Fong SL, Liou GI, Landers RA, Alvarez RA, Bridges CD (1984). "Purification and characterization of a retinol-binding glycoprotein synthesized and secreted by bovine neural retina." J Biol Chem 259(10);6534-42. PMID: 6427217

Fong88: Fong SL, Bridges CD (1988). "Internal quadruplication in the structure of human interstitial retinol-binding protein deduced from its cloned cDNA." J Biol Chem 263(30);15330-4. PMID: 3170584

Fong90: Fong SL, Fong WB, Morris TA, Kedzie KM, Bridges CD (1990). "Characterization and comparative structural features of the gene for human interstitial retinol-binding protein." J Biol Chem 265(7);3648-53. PMID: 2303470

Friedrich00: Friedrich CG, Quentmeier A, Bardischewsky F, Rother D, Kraft R, Kostka S, Prinz H (2000). "Novel genes coding for lithotrophic sulfur oxidation of Paracoccus pantotrophus GB17." J Bacteriol 182(17);4677-87. PMID: 10940005

Fukumori89: Fukumori Y, Hoshiko K, Yamanaka T (1989). "Purification and some properties of thiosulphate-cleaving enzyme from Thiobacillus novellus." FEMS Microbiol Lett 65:159-164. PMID: 2612884

Gleason88: Gleason FK, Holmgren A (1988). "Thioredoxin and related proteins in procaryotes." FEMS Microbiol Rev 1988;4(4);271-97. PMID: 3152490

Gleason90: Gleason FK, Lim CJ, Gerami-Nejad M, Fuchs JA (1990). "Characterization of Escherichia coli thioredoxins with altered active site residues." Biochemistry 1990;29(15);3701-9. PMID: 2187529

Gordon00: Gordon EH, Page MD, Willis AC, Ferguson SJ (2000). "Escherichia coli DipZ: anatomy of a transmembrane protein disulphide reductase in which three pairs of cysteine residues, one in each of three domains, contribute differentially to function." Mol Microbiol 35(6);1360-74. PMID: 10760137

Gustilo08: Gustilo EM, Vendeix FA, Agris PF (2008). "tRNA's modifications bring order to gene expression." Curr Opin Microbiol 11(2);134-40. PMID: 18378185

Gutzke01: Gutzke G, Fischer B, Mendel RR, Schwarz G (2001). "Thiocarboxylation of molybdopterin synthase provides evidence for the mechanism of dithiolene formation in metal-binding pterins." J Biol Chem 276(39);36268-74. PMID: 11459846

Hagemeier06: Hagemeier CH, Krer M, Thauer RK, Warkentin E, Ermler U (2006). "Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex." Proc Natl Acad Sci U S A 103(50);18917-22. PMID: 17142327

Hara67: Hara T, Hara R (1967). "Rhodopsin and retinochrome in the squid retina." Nature 214(5088);573-5. PMID: 6036171

Hara73: Hara T, Hara R (1973). "Isomerization of retinal catalysed by retinochrome in the light." Nat New Biol 242(115);39-43. PMID: 4512007

Holden97: Holden M, Mayhew M, Bunk D, Roitberg A, Vilker V (1997). "Probing the interactions of putidaredoxin with redox partners in camphor P450 5-monooxygenase by mutagenesis of surface residues." J Biol Chem 272(35);21720-5. PMID: 9268300

Holmgren85: Holmgren A (1985). "Thioredoxin." Annu Rev Biochem 1985;54;237-71. PMID: 3896121

Horie09: Horie A, Tomita T, Saiki A, Kono H, Taka H, Mineki R, Fujimura T, Nishiyama C, Kuzuyama T, Nishiyama M (2009). "Discovery of proteinaceous N-modification in lysine biosynthesis of Thermus thermophilus." Nat Chem Biol 5(9);673-9. PMID: 19620981

Ishimizu07: Ishimizu T, Sano K, Uchida T, Teshima H, Omichi K, Hojo H, Nakahara Y, Hase S (2007). "Purification and substrate specificity of UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase involved in the biosynthesis of the Xyl alpha1-3Xyl alpha1-3Glc beta1-O-Ser on epidermal growth factor-like domains." J Biochem 141(4);593-600. PMID: 17317689

Joe95: Joe YA, Wolff EC, Park MH (1995). "Cloning and expression of human deoxyhypusine synthase cDNA. Structure-function studies with the recombinant enzyme and mutant proteins." J Biol Chem 270(38);22386-92. PMID: 7673224

Kambampati00: Kambampati R, Lauhon CT (2000). "Evidence for the transfer of sulfane sulfur from IscS to ThiI during the in vitro biosynthesis of 4-thiouridine in Escherichia coli tRNA." J Biol Chem 2000;275(15);10727-30. PMID: 10753862

Katti90: Katti SK, LeMaster DM, Eklund H (1990). "Crystal structure of thioredoxin from Escherichia coli at 1.68 A resolution." J Mol Biol 1990;212(1);167-84. PMID: 2181145

Katzen03: Katzen F, Beckwith J (2003). "Role and location of the unusual redox-active cysteines in the hydrophobic domain of the transmembrane electron transporter DsbD." Proc Natl Acad Sci U S A 100(18);10471-6. PMID: 12925743

Keating00: Keating TA, Marshall CG, Walsh CT (2000). "Reconstitution and characterization of the Vibrio cholerae vibriobactin synthetase from VibB, VibE, VibF, and VibH." Biochemistry 39(50);15522-30. PMID: 11112538

Lambalot96: Lambalot RH, Gehring AM, Flugel RS, Zuber P, LaCelle M, Marahiel MA, Reid R, Khosla C, Walsh CT (1996). "A new enzyme superfamily - the phosphopantetheinyl transferases." Chem Biol 1996;3(11);923-36. PMID: 8939709

Lauhon04: Lauhon CT, Erwin WM, Ton GN (2004). "Substrate specificity for 4-thiouridine modification in Escherichia coli." J Biol Chem 279(22);23022-9. PMID: 15037613

Li96: Li E, Norris AW (1996). "Structure/function of cytoplasmic vitamin A-binding proteins." Annu Rev Nutr 16;205-34. PMID: 8839926

Lillig03: Lillig CH, Potamitou A, Schwenn JD, Vlamis-Gardikas A, Holmgren A (2003). "Redox regulation of 3'-phosphoadenylylsulfate reductase from Escherichia coli by glutathione and glutaredoxins." J Biol Chem 278(25);22325-30. PMID: 12682041

Liou87: Liou GI, Fong SL, Gosden J, van Tuinen P, Ledbetter DH, Christie S, Rout D, Bhattacharya S, Cook RG, Li Y (1987). "Human interstitial retinol-binding protein (IRBP): cloning, partial sequence, and chromosomal localization." Somat Cell Mol Genet 13(4);315-23. PMID: 3455009

Lyons96: Lyons TA, Ratnaswamy G, Pochapsky TC (1996). "Redox-dependent dynamics of putidaredoxin characterized by amide proton exchange." Protein Sci 5(4);627-39. PMID: 8845752

MartinezGomez11: Martinez-Gomez NC, Palmer LD, Vivas E, Roach PL, Downs DM (2011). "The Rhodanese Domain of ThiI Is Both Necessary and Sufficient for Synthesis of the Thiazole Moiety of Thiamine in Salmonella enterica." J Bacteriol 193(18);4582-7. PMID: 21724998

McCrate06: McCrate NE, Varner ME, Kim KI, Nagan MC (2006). "Molecular dynamics simulations of human tRNA Lys,3 UUU: the role of modified bases in mRNA recognition." Nucleic Acids Res 34(19);5361-8. PMID: 17012271

Michelet06: Michelet L, Zaffagnini M, Massot V, Keryer E, Vanacker H, Miginiac-Maslow M, Issakidis-Bourguet E, Lemaire SD (2006). "Thioredoxins, glutaredoxins, and glutathionylation: new crosstalks to explore." Photosynth Res 89(2-3);225-45. PMID: 17089213

Mueller98: Mueller EG, Buck CJ, Palenchar PM, Barnhart LE, Paulson JL (1998). "Identification of a gene involved in the generation of 4-thiouridine in tRNA." Nucleic Acids Res 26(11);2606-10. PMID: 9592144

Munn86: Munn C A M (1886). "Researches on Myohaematin and the Histohaematins." Philosophical Transactions of the Royal Society of London 177(0);267-298.

Neumann02: Neumann A, Siebert A, Trescher T, Reinhardt S, Wohlfarth G, Diekert G (2002). "Tetrachloroethene reductive dehalogenase of Dehalospirillum multivorans: substrate specificity of the native enzyme and its corrinoid cofactor." Arch Microbiol 177(5);420-6. PMID: 11976751

Newcomer98: Newcomer ME, Jamison RS, Ong DE (1998). "Structure and function of retinoid-binding proteins." Subcell Biochem 30;53-80. PMID: 9932510

Nikkola93: Nikkola M, Gleason FK, Fuchs JA, Eklund H (1993). "Crystal structure analysis of a mutant Escherichia coli thioredoxin in which lysine 36 is replaced by glutamic acid." Biochemistry 1993;32(19);5093-8. PMID: 8098620

Ouchi13: Ouchi T, Tomita T, Horie A, Yoshida A, Takahashi K, Nishida H, Lassak K, Taka H, Mineki R, Fujimura T, Kosono S, Nishiyama C, Masui R, Kuramitsu S, Albers SV, Kuzuyama T, Nishiyama M (2013). "Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus." Nat Chem Biol 9(4);277-83. PMID: 23434852

Pacholec05: Pacholec M, Hillson NJ, Walsh CT (2005). "NovJ/NovK catalyze benzylic oxidation of a beta-hydroxyl tyrosyl-S-pantetheinyl enzyme during aminocoumarin ring formation in novobiocin biosynthesis." Biochemistry 44(38);12819-26. PMID: 16171397

Park06: Park YJ, Yoo CB, Choi SY, Lee HB (2006). "Purifications and characterizations of a ferredoxin and its related 2-oxoacid:ferredoxin oxidoreductase from the hyperthermophilic archaeon, Sulfolobus solfataricus P1." J Biochem Mol Biol 39(1);46-54. PMID: 16466637

Paul96: Paul L, Krzycki JA (1996). "Sequence and transcript analysis of a novel Methanosarcina barkeri methyltransferase II homolog and its associated corrinoid protein homologous to methionine synthase." J Bacteriol 178(22);6599-607. PMID: 8932317

Pochapsky94: Pochapsky TC, Ye XM, Ratnaswamy G, Lyons TA (1994). "An NMR-derived model for the solution structure of oxidized putidaredoxin, a 2-Fe, 2-S ferredoxin from Pseudomonas." Biochemistry 33(21);6424-32. PMID: 8204575

Pott98: Pott AS, Dahl C (1998). "Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur." Microbiology 144 ( Pt 7);1881-94. PMID: 9695921

Quentmeier01: Quentmeier A, Friedrich CG (2001). "The cysteine residue of the SoxY protein as the active site of protein-bound sulfur oxidation of Paracoccus pantotrophus GB17." FEBS Lett 503(2-3);168-72. PMID: 11513876

Quentmeier03: Quentmeier A, Hellwig P, Bardischewsky F, Grelle G, Kraft R, Friedrich CG (2003). "Sulfur oxidation in Paracoccus pantotrophus: interaction of the sulfur-binding protein SoxYZ with the dimanganese SoxB protein." Biochem Biophys Res Commun 312(4);1011-8. PMID: 14651972

Rozhkova08: Rozhkova A, Glockshuber R (2008). "Thermodynamic aspects of DsbD-mediated electron transport." J Mol Biol 380(5);783-8. PMID: 18571669

Ryals82: Ryals J, Hsu RY, Lipsett MN, Bremer H (1982). "Isolation of single-site Escherichia coli mutants deficient in thiamine and 4-thiouridine syntheses: identification of a nuvC mutant." J Bacteriol 151(2);899-904. PMID: 6178725

Sari99: Sari N, Holden MJ, Mayhew MP, Vilker VL, Coxon B (1999). "Comparison of backbone dynamics of oxidized and reduced putidaredoxin by 15N NMR relaxation measurements." Biochemistry 38(31);9862-71. PMID: 10433692

Si89: Si JS, Borst DE, Redmond TM, Nickerson JM (1989). "Cloning of cDNAs encoding human interphotoreceptor retinoid-binding protein (IRBP) and comparison with bovine IRBP sequences." Gene 80(1);99-108. PMID: 2792773

Smith04: Smith N, Mayhew M, Holden MJ, Kelly H, Robinson H, Heroux A, Vilker VL, Gallagher DT (2004). "Structure of C73G putidaredoxin from Pseudomonas putida." Acta Crystallogr D Biol Crystallogr 60(Pt 5);816-22. PMID: 15103126

Soly91: Soly RR, Meighen EA (1991). "Identification of the acyl transfer site of fatty acyl-protein synthetase from bioluminescent bacteria." J Mol Biol 219(1);69-77. PMID: 2023262

Sperling75: Sperling L, Hubbard R (1975). "Squid retinochrome." J Gen Physiol 65(2);235-51. PMID: 235007

Stockdreher12: Stockdreher Y, Venceslau SS, Josten M, Sahl HG, Pereira IA, Dahl C (2012). "Cytoplasmic sulfurtransferases in the purple sulfur bacterium Allochromatium vinosum: evidence for sulfur transfer from DsrEFH to DsrC." PLoS One 7(7);e40785. PMID: 22815818

Tallant96: Tallant TC, Krzycki JA (1996). "Coenzyme M methylase activity of the 480-kilodalton corrinoid protein from Methanosarcina barkeri." J Bacteriol 178(5);1295-301. PMID: 8631705

Taylor98: Taylor SV, Kelleher NL, Kinsland C, Chiu HJ, Costello CA, Backstrom AD, McLafferty FW, Begley TP (1998). "Thiamin biosynthesis in Escherichia coli. Identification of this thiocarboxylate as the immediate sulfur donor in the thiazole formation." J Biol Chem 273(26);16555-60. PMID: 9632726

Unno96: Unno M, Shimada H, Toba Y, Makino R, Ishimura Y (1996). "Role of Arg112 of cytochrome p450cam in the electron transfer from reduced putidaredoxin. Analyses with site-directed mutants." J Biol Chem 271(30);17869-74. PMID: 8663375

VlamisGardikas02: Vlamis-Gardikas A, Holmgren A (2002). "Thioredoxin and glutaredoxin isoforms." Methods Enzymol 347;286-96. PMID: 11898418

Winter93: Winter NS, Bratt JM, Banaszak LJ (1993). "Crystal structures of holo and apo-cellular retinol-binding protein II." J Mol Biol 230(4);1247-59. PMID: 8487303

Xi01: Xi J, Ge Y, Kinsland C, McLafferty FW, Begley TP (2001). "Biosynthesis of the thiazole moiety of thiamin in Escherichia coli: identification of an acyldisulfide-linked protein--protein conjugate that is functionally analogous to the ubiquitin/E1 complex." Proc Natl Acad Sci U S A 98(15);8513-8. PMID: 11438688


Report Errors or Provide Feedback
Page generated by Pathway Tools version 19.5 (software by SRI International) on Wed Feb 10, 2016, biocyc13.