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Aquifex aeolicus VF5 Protein Class: a protein complex

Superclasses: a complex
a protein

An instance of this class defines a multimeric protein complex consisting of multiple aggregated polypeptide chains. It may be chemically modified. It may be a homomultimer or a heteromultimer. Its components may themselves be protein complexes.

Child Classes: a 3-methyl-2-oxobutanoate dehydrogenase (0), a branched-chain 2-keto acid dehydrogenase (0), a citrate lyase (0), a collagen (0), a cysteine desulfurylase (0), a DsrC sulfur carrier protein (0), a factor X (0), a factor Xa (0), a factor XI (0), a factor XIa (0), a glutamine synthetase (0), a hemoglobin (0), a holo-[carbon monoxide dehydrogenase] (0), a holo-[methylmalonyl-CoA:pyruvate carboxytransferase] (0), a hydrogenase (0), a hydrogenase 3 (0), a NifDK protein complex (0), a NifDK protein containing an M-cluster (0), a NifEN protein complex (0), a NifEN protein complex containing an L-cluster (0), a NifEN protein complex containing an M-cluster (0), a nitrate reductase (0), a nitrogenase complex (0), a phosphatase-2A (0), a phosphorylase a (0), a phosphorylase b (0), a plasmin (0), a procollagen (0), a pyruvate dehydrogenase (0), a pyruvate,water dikinase (0), a ribonucleoside triphosphate reductase (0), a Ribulose Bisphosphate Carboxylase/Oxygenase (0), a thyroglobulin (0), a xanthine dehydrogenase (0), a xanthine oxidase (0), a [chaperone-ADP]-[disordered-form scaffold protein] complex (0), a [chaperone-ATP]-[co-chaperone]-[scaffold protein-(2Fe-2S)] complex (0), a [co-chaperone]-[scaffold protein-(2Fe-2S)] complex (0), a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex (0), a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex (0), a [cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex (0), a [glycogenin] (0), a [holo-acyl-carrier-protein] synthase (0), an acetyl-CoA carboxylase (0), an acetyl-[holo citrate lyase acyl-carrier protein] (0), an apo-[carbon monoxide dehydrogenase] (0), an apo-[methylmalonyl-CoA:pyruvate carboxytransferase] (0), an isocitrate dehydrogenase (0), an RNA polymerase (0), an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex (0), an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex (0), an [acetyl-CoA carboxylase] phosphate (0), citramalate lyase, active (0), citramalate lyase, inactive (0), Ent-B (0), Flavorubredoxin (0), [a holo citrate lyase acyl-carrier protein] (0), [a holo malonate decarboxylase acyl-carrier-protein] (0), [a pyruvate, water dikinase]-phosphate (0), [a SoxY protein] (0), [an apo citrate-lyase acyl-carrier protein] (0), [an apo malonate decarboxylase acyl-carrier protein] (0)

predicted ATP-driven transporter of a cation,
predicted ATP-driven transporter of an anion,
predicted ATP-driven transporter of phosphate


Bagchi05: Bagchi A, Ghosh TC (2005). "A structural study towards the understanding of the interactions of SoxY, SoxZ, and SoxB, leading to the oxidation of sulfur anions via the novel global sulfur oxidizing (sox) operon." Biochem Biophys Res Commun 335(2);609-15. PMID: 16084835

Cort08: Cort JR, Selan U, Schulte A, Grimm F, Kennedy MA, Dahl C (2008). "Allochromatium vinosum DsrC: solution-state NMR structure, redox properties, and interaction with DsrEFH, a protein essential for purple sulfur bacterial sulfur oxidation." J Mol Biol 382(3);692-707. PMID: 18656485

Dahl13: Dahl C, Franz B, Hensen D, Kesselheim A, Zigann R (2013). "Sulfite oxidation in the purple sulfur bacterium Allochromatium vinosum: identification of SoeABC as a major player and relevance of SoxYZ in the process." Microbiology 159(Pt 12);2626-38. PMID: 24030319

Elovson68: Elovson J, Vagelos PR (1968). "Acyl carrier protein. X. Acyl carrier protein synthetase." J Biol Chem 1968;243(13);3603-11. PMID: 4872726

Friedrich00: Friedrich CG, Quentmeier A, Bardischewsky F, Rother D, Kraft R, Kostka S, Prinz H (2000). "Novel genes coding for lithotrophic sulfur oxidation of Paracoccus pantotrophus GB17." J Bacteriol 182(17);4677-87. PMID: 10940005

Grein10: Grein F, Pereira IA, Dahl C (2010). "Biochemical Characterization of Individual Components of the Allochromatium vinosum DsrMKJOP Transmembrane Complex Aids Understanding of Complex Function In Vivo." J Bacteriol 192(24);6369-77. PMID: 20952577

Hedderich04: Hedderich R (2004). "Energy-converting [NiFe] hydrogenases from archaea and extremophiles: ancestors of complex I." J Bioenerg Biomembr 36(1);65-75. PMID: 15168611

Lin91: Lin EC, Iuchi S (1991). "Regulation of gene expression in fermentative and respiratory systems in Escherichia coli and related bacteria." Annu Rev Genet 1991;25;361-87. PMID: 1812811

Markley13: Markley JL, Kim JH, Dai Z, Bothe JR, Cai K, Frederick RO, Tonelli M (2013). "Metamorphic protein IscU alternates conformations in the course of its role as the scaffold protein for iron-sulfur cluster biosynthesis and delivery." FEBS Lett. PMID: 23333622

Nilekani83: Nilekani S, SivaRaman C (1983). "Purification and properties of citrate lyase from Escherichia coli." Biochemistry 1983;22(20);4657-63. PMID: 6354265

Polacco81: Polacco ML, Cronan JE (1981). "A mutant of Escherichia coli conditionally defective in the synthesis of holo-[acyl carrier protein]." J Biol Chem 1981;256(11);5750-4. PMID: 7016860

Quentmeier01: Quentmeier A, Friedrich CG (2001). "The cysteine residue of the SoxY protein as the active site of protein-bound sulfur oxidation of Paracoccus pantotrophus GB17." FEBS Lett 503(2-3);168-72. PMID: 11513876

Quentmeier03: Quentmeier A, Hellwig P, Bardischewsky F, Grelle G, Kraft R, Friedrich CG (2003). "Sulfur oxidation in Paracoccus pantotrophus: interaction of the sulfur-binding protein SoxYZ with the dimanganese SoxB protein." Biochem Biophys Res Commun 312(4);1011-8. PMID: 14651972

Schedel79: Schedel, M., Vanselow, M., Trueper, H. G. (1979). "Siroheme sulfite reductase from Chromatium vinosum. Purification and investigation of some of its molecular and catalytic properties." Arch. Microbiol. 121: 29-36.

Silberg01: Silberg JJ, Hoff KG, Tapley TL, Vickery LE (2001). "The Fe/S assembly protein IscU behaves as a substrate for the molecular chaperone Hsc66 from Escherichia coli." J Biol Chem 276(3);1696-700. PMID: 11053447

Silberg04: Silberg JJ, Tapley TL, Hoff KG, Vickery LE (2004). "Regulation of the HscA ATPase reaction cycle by the co-chaperone HscB and the iron-sulfur cluster assembly protein IscU." J Biol Chem 279(52);53924-31. PMID: 15485839

Sun10: Sun J, Hopkins RC, Jenney FE, McTernan PM, Adams MW (2010). "Heterologous expression and maturation of an NADP-dependent [NiFe]-hydrogenase: a key enzyme in biofuel production." PLoS One 5(5);e10526. PMID: 20463892

Vignais08: Vignais PM (2008). "Hydrogenases and H(+)-reduction in primary energy conservation." Results Probl Cell Differ 45;223-52. PMID: 18500479

Zhou03a: Zhou J, Pham HT, Ruediger R, Walter G (2003). "Characterization of the Aalpha and Abeta subunit isoforms of protein phosphatase 2A: differences in expression, subunit interaction, and evolution." Biochem J 369(Pt 2);387-98. PMID: 12370081

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