twitter

Escherichia coli K-12 substr. MG1655 Compound Class: a D-amino acid

Synonyms: D-α-amino acid

Superclasses: an amino acid or its derivative an amino acid

Summary:
This compound class stands for all D-amino acids.

a D-amino acid compound structure

Child Classes: a hydroxy-D-amino acid (0) , a N-methyl D-amino acid (0) , an aromatic D-amino acid (4) , an N-acylated-D-amino acid (0)

Instances:
D-alanine ,
D-asparagine ,
D-aspartate ,
D-cystathionine ,
D-cysteine ,
D-glutamate ,
D-glutamine ,
D-leucine ,
D-lysine ,
D-methionine ,
D-serine ,
D-threonine ,
D-valine

SMILES: C(C(=O)[O-])([N+])[R]

Unification Links: ChEBI:16733 , KEGG:C00405

Reactions known to consume the compound:

Not in pathways:
a D-amino acid + an electron-transfer quinone[inner membrane] + H2O → ammonium + a 2-oxo carboxylate + an electron-transfer quinol[inner membrane]

Reactions known to produce the compound:

Not in pathways:
a D-aminoacyl-[tRNA] + H2O → a D-amino acid + an uncharged tRNA + 2 H+

In Reactions of unknown directionality:

Not in pathways:
a 5-L-glutamyl-[peptide][periplasmic space] + an amino acid[periplasmic space] = a 5-L-glutamyl-amino acid[periplasmic space] + a peptide[periplasmic space]

In Redox half-reactions:
a 2-oxo carboxylate[in] + ammonium[in] + 2 H+[in] + 2 e-[membrane]a D-amino acid[in] + H2O[in]


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 19.0 on Sun May 24, 2015, biocyc13.