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Escherichia coli K-12 substr. MG1655 Compound Class: a D-amino acid

Synonyms: D-α-amino acid

Superclasses: an acidall carboxy acidsa carboxylatean amino acid
an amino acid or its derivativean amino acid


Summary:
This compound class stands for all D-amino acids.

a D-amino acid compound structure

Child Classes: a hydroxy-D-amino acid (0), a N-methyl D-amino acid (0), an aromatic D-amino acid (4), an N-acylated-D-amino acid (0)

Instances:
D-alanine,
D-asparagine,
D-aspartate,
D-cystathionine,
D-cysteine,
D-glutamate,
D-glutamine,
D-leucine,
D-lysine,
D-methionine,
D-serine,
D-threonine,
D-valine

SMILES: C(C(=O)[O-])([N+])[R]

Unification Links: ChEBI:16733, KEGG:C00405

Reactions known to consume the compound:

Not in pathways:
a D-amino acid + an electron-transfer quinone[inner membrane] + H2O → ammonium + a 2-oxo carboxylate + an electron-transfer quinol[inner membrane]

Reactions known to produce the compound:

Not in pathways:
a D-aminoacyl-[tRNA] + H2O → a D-amino acid + an uncharged tRNA + 2 H+

Not in pathways:
a carboxylic ester + H2O → an alcohol + a carboxylate + H+
an aldehyde + NADP+ + H2O → a carboxylate + NADPH + 2 H+
an acyl phosphate + H2O → a carboxylate + phosphate + H+
an acyl-CoA + H2O → a carboxylate + coenzyme A + H+
a 1-acyl 2-lyso-phosphatidylcholine + H2O → a carboxylate + sn-glycero-3-phosphocholine + H+

In Reactions of unknown directionality:

Not in pathways:
a 5-L-glutamyl-[peptide][periplasm] + an amino acid[periplasm] = a 5-L-glutamyl-amino acid[periplasm] + a peptide[periplasm]

Not in pathways:
a 2-acyl 1-lyso-phosphatidylcholine + H2O = a carboxylate + sn-glycero-3-phosphocholine + H+
an aldehyde[periplasm] + FAD[periplasm] + H2O[periplasm] = a carboxylate[periplasm] + FADH2[periplasm]

In Transport reactions:
an amino acid[periplasm]an amino acid[extracellular space]

In Redox half-reactions:
a 2-oxo carboxylate[in] + ammonium[in] + 2 H+[in] + 2 e-[membrane]a D-amino acid[in] + H2O[in]


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by Pathway Tools version 19.5 (software by SRI International) on Tue Feb 9, 2016, biocyc14.