Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
twitter

Escherichia coli K-12 substr. MG1655 Compound Class: a D-amino acid

Synonyms: D-α-amino acid

Superclasses: an amino acid or its derivative an amino acid

Summary:
This compound class stands for all D-amino acids.

Child Classes: a hydroxy-D-amino acid (0) , a N-methyl D-amino acid (0) , an aromatic D-amino acid (4) , an N-acylated-D-amino acid (0)

Instances:
D-alanine ,
D-asparagine ,
D-aspartate ,
D-cystathionine ,
D-cysteine ,
D-glutamate ,
D-glutamine ,
D-leucine ,
D-lysine ,
D-methionine ,
D-serine ,
D-threonine ,
D-valine

SMILES: C(C(=O)[O-])([N+])[R]

Unification Links: ChEBI:16733 , KEGG:C00405

Reactions known to consume the compound:

Not in pathways:
a D-amino acid + an electron-transfer-related quinone[inner membrane] + H2O → ammonium + a 2-oxo carboxylate + an electron-transfer-related quinol[inner membrane]

Reactions known to produce the compound:

Not in pathways:
a D-aminoacyl-tRNA + H2O → a D-amino acid + a tRNA + 2 H+

In Reactions of unknown directionality:

Not in pathways:
a 5-L-glutamyl-[peptide][periplasmic space] + an amino acid[periplasmic space] = a 5-L-glutamyl-amino acid[periplasmic space] + a peptide[periplasmic space]

In Redox half-reactions:
a 2-oxo carboxylate[in] + ammonium[in] + 2 H+[in] + 2 e-a D-amino acid[in] + H2O[in]


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Sun Nov 23, 2014, biocyc14.