Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0005829 - cytosol

Definition: The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Parent Classes:
GO:0044444 - cytoplasmic part

Part Of:
GO:0005737 - cytoplasm

Parts:
GO:0044445 - cytosolic part (80)

Term Members:
TesB ,
tRNA threonylcarbamoyladenosine dehydratase (tcdA) ,
DNA ligase (ligB) ,
anaerobic glycerol-3-phosphate dehydrogenase subunit A (glpA) ,
conserved protein (yjdM) ,
50S ribosomal subunit protein L2 (rplB) ,
conserved protein (yicH) ,
SodA ,
conserved protein (yhcB) ,
SspB ,
conserved protein (yqjK) ,
predicted signal transduction protein (SH3 domain) (ygiM) ,
fructose bisphosphate aldolase monomer (fbaA) ,
predicted protein (ygaM) ,
predicted protein (yfcO) ,
conserved protein (elaB) ,
(1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (menH) ,
predicted protein (yfaA) ,
predicted protein (ydjY) ,
glutaredoxin 4 (grxD) ,
flagellar hook protein FlgE ,
flagellar biosynthesis, initiation of hook assembly (flgD) ,
conserved protein (ybjX) ,
esterase (ybfF) ,
conserved protein (yajD) ,
CP4-6 prophage; predicted DNA-binding transcriptional regulator (yagA) ,
essential respiratory protein A (erpA) ,
predicted rRNA methyltransferase (yjtD) ,
CreB transcriptional regulator ,
ITPase/XTPase (yjjX) ,
TrpR ,
NadR DNA-binding transcriptional repressor and NMN adenylyltransferase ,
DNA recombination protein (radA) ,
predicted DNA-binding transcriptional regulator (yjjJ) ,
phosphopentomutase (deoB) ,
DeoA ,
conserved protein, may be involved in nitrogen metabolism (yjjI) ,
predicted pyruvate formate lyase activating enzyme (yjjW) ,
predicted DNase (yjjV) ,
pyrimidine nucleotidase (yjjG) ,
ribosomal-protein-S18-alanine N-acetyltransferase (rimI) ,
16S rRNA m2G1207 methyltransferase (rsmC) ,
predicted DNA-binding transcriptional regulator (yjjQ) ,
chromosome replication; initiation and chain elongation (dnaC) ,
L-galactonate oxidoreductase (lgoD) ,
predicted DNA-binding transcriptional regulator (lgoR) ,
P-loop guanosine triphosphatase (yjiA) ,
methylated adenine and cytosine restriction protein (mrr) ,
putative regulator (yjiR) ,
predicted transposase (yjiQ) ,
predicted ATPase, activator of (R)-hydroxyglutaryl-CoA dehdratase (yjiL) ,
IadA ,
HypT transcriptional dual regulator ,
D-mannonate oxidoreductase (uxuB) ,
D-mannonate dehydratase (uxuA) ,
KpLE2 phage-like element; predicted frameshift suppressor (yjhR) ,
KpLE2 phage-like element; predicted acetyltransferase (yjhQ) ,
KpLE2 phage-like element; predicted methyltransferase (yjhP) ,
KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain (sgcX) ,
predicted PTS permease - SgcB subunit ,
KpLE2 phage-like element; predicted nucleoside triphosphatase (sgcQ) ,
predicted PTS permease - SgcA subunit ,
KpLE2 phage-like element; predicted epimerase (sgcE) ,
KpLE2 phage-like element; predicted DNA-binding transcriptional regulator (sgcR) ,
KpLE2 phage-like element; predicted DNA-binding transcriptional regulator (yjhI) ,
KpLE2 phage-like element; 2-dehydro-3-deoxy-D-pentonate aldolase (yjhH) ,
KpLE2 phage-like element; D-xylonate dehydratase (yjhG) ,
KpLE2 phage-like element; predicted DNA-binding transcriptional regulator (yjhU) ,
KpLE2 phage-like element; IS1 repressor protein InsA (insA-7) ,
KpLE2 phage-like element; IS30 transposase (insI-3) ,
KpLE2 phage-like element; partial regulator of insertion element IS911B (interrupted) (insN-2) ,
IS1 predicted transposase (insG) ,
KpLE2 phage-like element; predicted protein (yjgZ) ,
KpLE2 phage-like element; IS2 insertion element repressor InsA (insC-6) ,
KpLE2 phage-like element; predicted integrase (intB) ,
aldehyde reductase, NADPH-dependent (ahr) ,
D-gluconate kinase, thermosensitive (idnK) ,
L-idonate 5-dehydrogenase (idnD) ,
valyl-tRNA synthetase (valS) ,
predicted acetyltransferase (yjgM) ,
ribonuclease E inhibitor protein B (rraB) ,
toxin-antitoxin biofilm protein (tabA) ,
predicted transcriptional regulator (bdcR) ,
c-di-GMP binding protein involved in biofilm dispersal (bdcA) ,
predicted mRNA endoribonuclease (yjgH) ,
predicted enamine/imine deaminase (ridA) ,
ribonucleoside-triphosphate reductase (nrdD) ,
NrdG ,
putative alpha-helix protein (yjgA) ,
UDP-N-acetylmuramate:L-alanyl-γ-D-glutamyl-meso-diaminoheptanedioate-D-alanine ligase [multifunctional] (mpl) ,
ChpB toxin of the ChpB-ChpS toxin-antitoxin system ,
ChpS antitoxin of the ChpB-ChpS toxin-antitoxin system ,
predicted transcriptional regulator (ytfH) ,
protein involved in repair of stress-damaged iron-sulfur clusters (ytfE) ,
predicted transcriptional regulator (ytfA) ,
50S ribosomal subunit protein L9 (rplI) ,
30S ribosomal subunit protein S18 (rpsR) ,
30S ribosomal subunit protein S6 (rpsF) ,
predicted protein (yjfY) ,
L-ribulose 5-phosphate 4-epimerase (ulaF) ,
L-xylulose 5-phosphate 3-epimerase (ulaE) ,
3-keto-L-gulonate 6-phosphate decarboxylase (ulaD) ,
L-ascorbate PTS permease - UlaB subunit ,
UlaR DNA-binding transcriptional repressor ,
predicted synthetase/amidase with ATPase activity (yjfC) ,
predicted transcriptional regulator effector protein (yjfJ) ,
23S rRNA 2'-O-ribose G2251 methyltransferase monomer (rlmB) ,
RNase R (rnr) ,
NsrR ,
GTPase associated with the 50S subunit of the ribosome (hflX) ,
protein involved in threonylcarbamoyladenosine biosynthesis (tsaE) ,
epoxyqueuosine reductase (queG) ,
oligoribonuclease monomer (orn) ,
EF-P-lysine lysyltransferase (epmA) ,
lysine 2,3-aminomutase (epmB) ,
predicted protein (yjeJ) ,
predicted transcriptional regulator (yjdC) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (yjdJ) ,
AdiY DNA-binding transcriptional activator ,
Clamp-binding sister replication fork colocalization protein (crfC) ,
PhnF predicted transcriptional regulator ,
PhnG subunit of methylphosphonate degradation complex ,
PhnH subunit of methylphosphonate degradation complex ,
PhnI subunit of methylphosphonate degradation complex ,
carbon-phosphorous lyase (phnJ) ,
RPnTP hydrolase (phnM) ,
aminoalkylphosphonate N-acetyltransferase (phnO) ,
5-phospho-α-D-ribosyl 1,2-cyclic phosphate phosphodiesterase (phnP) ,
allose-6-phosphate isomerase / ribose-5-phosphate isomerase B monomer (rpiB) ,
allulose-6-phosphate 3-epimerase (alsE) ,
D-allose kinase (alsK) ,
acetyl-CoA synthetase (AMP-forming) (acs) ,
conserved protein (yjbR) ,
conserved protein (yjbQ) ,
alanine racemase 1, PLP-binding, biosynthetic (alr) ,
tRNA-dihydrouridine synthase A (dusA) ,
predicted stress response protein (yjbJ) ,
LysC ,
23S rRNA pseudouridine 2604 synthase (rluF) ,
peptidase E, a dipeptidase where amino-terminal residue is aspartate (pepE) ,
cobalamin-dependent methionine synthase ,
regulator of acetyl CoA synthetase (arpA) ,
AceK ,
predicted acetyltransferase (yjaB) ,
conserved protein (yrdA) ,
conserved protein (yrdB) ,
shikimate dehydrogenase (aroE) ,
protein involved in synthesis of threonylcarbamoyladenosine-modified tRNA (tsaC) ,
predicted DNA topoisomerase (yrdD) ,
conserved protein (smg) ,
conserved protein (smf) ,
peptide deformylase ,
conserved protein (yhdN) ,
50S ribosomal subunit protein L17 (rplQ) ,
30S ribosomal subunit protein S4 (rpsD) ,
30S ribosomal subunit protein S11 (rpsK) ,
30S ribosomal subunit protein S13 (rpsM) ,
50S ribosomal subunit protein L36 (rpmJ) ,
50S ribosomal subunit protein L30 (rpmD) ,
30S ribosomal subunit protein S5 (rpsE) ,
50S ribosomal subunit protein L18 (rplR) ,
50S ribosomal subunit protein L6 (rplF) ,
30S ribosomal subunit protein S8 (rpsH) ,
30S ribosomal subunit protein S14 (rpsN) ,
50S ribosomal subunit protein L5 (rplE) ,
50S ribosomal subunit protein L24 (rplX) ,
50S ribosomal subunit protein L14 (rplN) ,
30S ribosomal subunit protein S17 (rpsQ) ,
50S ribosomal subunit protein L29 (rpmC) ,
50S ribosomal subunit protein L16 (rplP) ,
30S ribosomal subunit protein S3 (rpsC) ,
50S ribosomal subunit protein L22 (rplV) ,
30S ribosomal subunit protein S19 (rpsS) ,
50S ribosomal subunit protein L23 (rplW) ,
50S ribosomal subunit protein L4 (rplD) ,
50S ribosomal subunit protein L3 (rplC) ,
30S ribosomal subunit protein S10 (rpsJ) ,
general secretory pathway component, cryptic (gspA) ,
putative protein secretion protein for export (gspE) ,
30S ribosomal subunit protein S7 (rpsG) ,
30S ribosomal subunit protein S12 (rpsL) ,
sulfur transfer protein complex, TusC subunit ,
predicted DNA-binding transcriptional regulator (yheO) ,
host factor for lysis of φX174 infection (slyX) ,
FKBP-type peptidyl prolyl cis-trans isomerase (slyD) ,
predicted protein (yheV) ,
protein required for KefB activity (kefG) ,
conserved protein (yheU) ,
predicted phosphoribulokinase (prkB) ,
conserved protein (yhfA) ,
PabA ,
stationary-phase protein with possible role in p-aminobenzoate or folate biosynthesis (fic) ,
CysG ,
fructoselysine 6-phosphate deglycase monomer (frlB) ,
fructoselysine 3-epimerase (frlC) ,
fructoselysine 6-kinase (frlD) ,
predicted DNA-binding transcriptional regulator (frlR) ,
conserved protein (yhfS) ,
predicted hydrolase (php) ,
predicted mutase (yhfW) ,
conserved protein (yhfY) ,
conserved protein (yhfZ) ,
ribulose-5-phosphate 3-epimerase (rpe) ,
3-dehydroquinate synthase (aroB) ,
shikimate kinase I (aroK) ,
ADP-sugar pyrophosphorylase (nudE) ,
purine nucleotidase (yrfG) ,
phosphoenolpyruvate carboxykinase (ATP) (pck) ,
predicted transcriptional accessory protein (yhgF) ,
predicted DNA-binding transcriptional regulator (feoC) ,
predicted transposase (yhgA) ,
protein involved in utilization of DNA as a carbon source (gntX) ,
iron-sulfur cluster scaffold protein (nfuA) ,
maltodextrin phosphorylase monomer (malP) ,
RNA ligase (rtcB) ,
GlpE ,
Asd ,
GntK ,
pirin-like protein (yhhW) ,
predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain (yhhX) ,
predicted acetyltransferase (yhhY) ,
predicted protein with chaperone-like activity (yrhB) ,
glycerol-3-phosphate ABC transporter - ATP binding subunit (ugpC) ,
maturation factor for PanD (panZ) ,
16S rRNA m2G966 methyltransferase (rsmD) ,
holo-[acyl carrier protein] synthase 2 (acpT) ,
predicted transposase (yhhI) ,
predicted oxidoreductase with FAD/NAD(P)-binding domain (yhiN) ,
16S rRNA m2G1516 methyltransferase (rsmJ) ,
23S rRNA m6A2030 methyltransferase (rlmJ) ,
arsenate reductase (arsC) ,
IS5 transposase and trans-activator (insH-11) ,
predicted DNA-binding transcriptional regulator (dctR) ,
GadE DNA-binding transcriptional activator ,
GadW DNA-binding transcriptional dual regulator ,
GadX DNA-binding transcriptional dual regulator ,
predicted DNA-binding response regulator in two-component regulatory system (yhjB) ,
predicted DNA-binding transcriptional regulator (yhjC) ,
c-di-GMP phosphodiesterase (yhjH) ,
2-keto-3-deoxygluconokinase (kdgK) ,
3-methyl-adenine DNA glycosylase I, constitutive (tag) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (yiaC) ,
predicted transcriptional regulator (yiaG) ,
IS150 protein InsA (insJ) ,
IS150 conserved protein InsB (insK) ,
xylulokinase (xylB) ,
XylR transcriptional activator ,
valine-pyruvate aminotransferase (avtA) ,
predicted hydrogenase, 4Fe-4S ferredoxin-type component (ysaA) ,
YiaJ DNA-binding transcriptional repressor ,
2,3-diketo-L-gulonate reductase monomer (yiaK) ,
conserved protein (yiaL) ,
L-xylulose kinase (lyxK) ,
3-keto-L-gulonate 6-phosphate decarboxylase (sgbH) ,
predicted L-xylulose 5-phosphate 3-epimerase (sgbU) ,
L-ribulose-5-phosphate 4-epimerase (sgbE) ,
AldB ,
L-threonine dehydrogenase (yiaY) ,
glutathione transferase-like protein possibly involved in selenium metabolism (yibF) ,
predicted lyase containing HEAT-repeat (yibA) ,
mannitol-1-phosphate 5-dehydrogenase (mtlD) ,
conserved protein (yibL) ,
tRNA (cytidine/uridine-2'-O)-ribose methyltransferase (trmL) ,
reduced glutaredoxin 3 (grxC) ,
predicted rhodanese-related sulfurtransferase (yibN) ,
UDP-glucuronate:LPS(HepIII) glycosyltransferase (waaH) ,
Kbl ,
ADP-heptose:LPS heptosyltransferase II (waaF) ,
ADP-heptose:LPS heptosyltransferase I (waaC) ,
protein involved in KdoIII attachment during lipopolysaccharide core biosynthesis (waaZ) ,
lipopolysaccharide core heptose (II) kinase (waaY) ,
UDP-glucose:(glucosyl)LPS α-1,2-glucosyltransferase (waaJ) ,
UDP-D-glucose:(glucosyl)LPS α-1,3-glucosyltransferase (waaO) ,
UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase (waaB) ,
lipopolysaccharide core biosynthesis protein (waaS) ,
lipopolysaccharide core heptosyl transferase III (waaQ) ,
pantetheine-phosphate adenylyltransferase monomer (coaD) ,
50S ribosomal subunit protein L33 (rpmG) ,
50S ribosomal subunit protein L28 (rpmB) ,
hypothetical protein (yicR) ,
cell division inhibitor, nucleoid occlusion (slmA) ,
conserved protein (yicC) ,
tRNA (Gm18) 2'-O-methyltransferase (trmH) ,
cryptic adenine deaminase monomer (adeD) ,
acetohydroxy acid synthase I, small subunit (ilvN) ,
acetohydroxy acid synthase I, large subunit (ilvB) ,
predicted DNA-binding transcriptional regulator (yidF) ,
putative ARAC-type regulatory protein (yidL) ,
predicted DNA-binding transcriptional regulator (yidP) ,
small heat shock protein IbpA ,
2-oxo-3-deoxygalactonate 6-phosphate aldolase (dgoA) ,
2-dehydro-3-deoxygalactonate kinase (dgoK) ,
sugar phosphatase (yidA) ,
ssDNA and dsDNA binding, ATP binding (recF) ,
chromosomal replication initiator protein DnaA; DNA-binding transcriptional dual regulator ,
50S ribosomal subunit protein L34 (rpmH) ,
RNase P protein component; processes tRNA, 4.5S RNA (rnpA) ,
putative transcriptional regulator LysR-type (yidZ) ,
predicted phosphopantetheinyl transferase (yieE) ,
chromate reductase monomer (yieF) ,
6-phosphogluconate phosphatase (yieH) ,
colicin E2 tolerance protein (cbrC) ,
predicted 6-phosphogluconolactonase (yieK) ,
6-phospho-β-glucosidase B; cryptic (bglB) ,
PhoU ,
16S rRNA m7G527 methyltransferase (rsmG) ,
flavoprotein involved in biotin synthesis (mioC) ,
ribose pyranase (rbsD) ,
predicted transcriptional regulator (yieP) ,
conserved protein (yifE) ,
predicted ATP-dependent protease (yifB) ,
IlvM ,
IlvE ,
IlvD ,
IlvA ,
RhlB ,
thioredoxin 1 (trxA) ,
transcription termination factor Rho monomer; polarity suppressor ,
RffD ,
dTDP-glucose 4,6-dehydratase 2 (rffG) ,
dTDP-glucose pyrophosphorylase 2 (rffH) ,
dTDP-4-dehydro-6-deoxy-D-glucose transaminase (rffA) ,
uroporphyrinogen III synthase (hemD) ,
hydroxymethylbilane synthase (hemC) ,
conserved protein (yigA) ,
site-specific tyrosine recombinase (xerC) ,
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase (yigB) ,
conserved protein (yigI) ,
ATP-dependent DNA helicase (recQ) ,
phosphosugar phosphatase (yigL) ,
MetR ,
conserved protein involved in ubiquinone-8 biosynthesis (ubiJ) ,
riboflavin reductase / FMN reductase (fre) ,
3-ketoacyl-CoA thiolase (fadA) ,
proline dipeptidase (pepQ) ,
predicted elongation factor (yigZ) ,
HemG ,
molybdenum cofactor guanylyltransferase (mobA) ,
conserved protein (yihD) ,
GAP-like protein that activates GTPase activity of Der (yihI) ,
protein possibly involved in ribosome structure or function (typA) ,
YihL putative transcriptional regulator ,
conserved protein (yihM) ,
α-glucosidase (yihQ) ,
predicted aldose-1-epimerase (yihR) ,
sulfoquinovose isomerase (yihS) ,
6-deoxy-6-sulfofructose-1-phosphate aldolase (yihT) ,
3-sulfolactaldehyde reductase (yihU) ,
6-deoxy-6-sulfofructose kinase (yihV) ,
predicted DNA-binding transcriptional regulator (yihW) ,
α-D-glucose-1-phosphatase (yihX) ,
D-Tyr-tRNATyr deacylase (dtd) ,
predicted acetyltransferase (yiiD) ,
predicted transcriptional regulator (yiiE) ,
conserved protein (yiiF) ,
formate dehydrogenase formation protein (fdhE) ,
affects formate dehydrogenase-N (fdhD) ,
predicted PTS permease - FrvA subunit ,
rhamnulose-1-phosphate aldolase monomer (rhaD) ,
L-rhamnose isomerase (rhaA) ,
L-rhamnulose kinase (rhaB) ,
RhaS ,
RhaR transcriptional activator ,
6-phosphofructokinase-1 monomer (pfkA) ,
stress protein involved in resistance to UV irradiation (uspD) ,
flavodoxin NADP+ reductase (fpr) ,
cell division factor ZapB ,
ribonuclease E inhibitor protein (rraA) ,
MetL ,
GldA ,
fructose 6-phosphate aldolase 2 (fsaB) ,
fused predicted PTS enzyme : HPr component / enzyme I component / enzyme IIA component (ptsA) ,
predicted PTS permease - FrwB subunit ,
formate acetyltransferase 2 (pflD) ,
probable pyruvate formate lyase 2 activating enzyme (pflC) ,
predicted DNA-binding transcriptional regulator (yijO) ,
N-acetylglutamylphosphate reductase (argC) ,
FabR DNA-binding transcriptional repressor ,
pantothenate kinase monomer (coaA) ,
50S ribosomal subunit protein L1 (rplA) ,
50S ribosomal subunit protein L10 (rplJ) ,
50S ribosomal subunit protein L12 (rplL) ,
conserved protein (yjaZ) ,
tyrosine lyase (thiH) ,
ThiG ,
ThiS adenylyltransferase (thiF) ,
HMP-P synthase (thiC) ,
NADH pyrophosphatase (nudC) ,
uroporphyrinogen decarboxylase (hemE) ,
endonuclease V (deoxyinosine 3'-endonuclease) (nfi) ,
conserved protein (yjaG) ,
YhdZ ,
DNA adenine methyltransferase (yhdJ) ,
tRNA-dihydrouridine synthase B (dusB) ,
biotin carboxyl carrier protein (accB) ,
protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD (tldD) ,
quorum sensing transcriptional regulator of LYSR-type (aaeR) ,
predicted barnase inhibitor (yhcO) ,
stress-induced protein (yhcN) ,
ArgR ,
cell division factor ZapE with ATPase activity ,
50S ribosomal subunit protein L13 (rplM) ,
30S ribosomal subunit protein S9 (rpsI) ,
stringent starvation protein A (sspA) ,
NanR DNA-binding transcriptional dual regulator ,
N-acetylneuraminate lyase (nanA) ,
conserved protein (yhcH) ,
conserved protein (yhcG) ,
IS5 transposase and trans-activator (insH-10) ,
glutamate synthase, small subunit (gltD) ,
predicted Fe-S oxidoreductase (yhcC) ,
isoprenoid biosynthesis protein with amidotransferase-like domain (elbB) ,
predicted protein (yrbL) ,
phosphorelay protein Npr ,
RNase adaptor protein (rapZ) ,
phosphotransferase system enzyme IIA, regulation of potassium transport (ptsN) ,
RNA polymerase, sigma 54 (sigma N) factor (rpoN) ,
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer (kdsC) ,
D-arabinose 5-phosphate isomerase (kdsD) ,
predicted DNA-binding transcriptional regulator (ibaG) ,
UDP-N-acetylglucosamine enolpyruvoyl transferase (murA) ,
octaprenyl diphosphate synthase (ispB) ,
50S ribosomal subunit protein L21 (rplU) ,
50S ribosomal subunit protein L27 (rpmA) ,
predicted RNA-binding protein (yhbY) ,
23S rRNA 2'-O-ribose U2552 methyltransferase (rlmE) ,
FolP ,
ribosome maturation protein (rimP) ,
30S ribosomal subunit protein S15 (rpsO) ,
conserved protein (yhbW) ,
predicted protease (yhbV) ,
predicted peptidase (collagenase-like) (yhbU) ,
predicted lipid carrier protein (yhbT) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (yhbS) ,
predicted endonuclease (yhbQ) ,
conserved protein (yhbP) ,
DnaA initiator-associating factor for replication initiation (diaA) ,
16S rRNA 2'-O-ribose C1402 methyltransferase (rsmI) ,
predicted galactosamine-6-phosphate isomerase (agaI) ,
galactosamine PTS permease (cryptic) - AgaB subunit ,
KbaY ,
putative tagatose-6-phosphate aldose/ketose isomerase (agaS) ,
predicted truncated N-acetylgalactosamine-6-phosphate deacetylase (agaA) ,
N-acetyl-D-galactosamine PTS permease (cryptic) - AgaV subunit ,
KbaZ ,
AgaR DNA-binding transcriptional repressor ,
PrlF antitoxin ,
galactarate dehydratase (garD) ,
GarL ,
tartronate semialdehyde reductase (garR) ,
glycerate kinase I (garK) ,
predicted protein (yhaB) ,
TdcB ,
propionate kinase (tdcD) ,
predicted enamine/imine deaminase (tdcF) ,
conserved protein (yhaM) ,
bicupin-related protein (yhaK) ,
predicted DNA-binding transcriptional regulator LYSR-type (yhaJ) ,
S-glutathionyl-(chloro)hydroquinone reductase (yqjG) ,
D-glucuronate isomerase / D-galacturonate isomerase (uxaC) ,
D-altronate dehydratase (uxaA) ,
23S rRNA m2G1835 methyltransferase (rlmG) ,
translation-dependent mRNA interferase, toxin of the HigB-HigA toxin-antitoxin system ,
antitoxin of the HigB-HigA toxin-antitoxin system ,
2,4-dienoyl-CoA reductase (fadH) ,
evolved β-D-galactosidase, β subunit; cryptic gene (ebgC) ,
putative tRNA synthetase (ygjH) ,
YqjI DNA-binding transcriptional repressor ,
ferric reductase, NADPH-dependent (yqjH) ,
30S ribosomal subunit protein S21 (rpsU) ,
L-tartrate dehydratase, β subunit (ttdB) ,
L-tartrate dehydratase, α subunit (ttdA) ,
Dan (ttdR) ,
dihydroneopterin aldolase (folB) ,
inorganic triphosphatase (ygiF) ,
glutamine synthetase adenylyltransferase / glutamine synthetase deadenylase (glnE) ,
fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (rfaE) ,
IS2 insertion element repressor InsA (insC-5) ,
conserved protein (yqiC) ,
predicted enzyme with ATPase activity (ygiC) ,
esterase (yqiA) ,
quinol monooxygenase (ygiN) ,
YgiV DNA-binding transcriptional repressor ,
MqsA antitoxin of the MqsRA toxin-antitoxin system and DNA-binding transcriptional repressor ,
NADPH-dependent aldehyde reductase (yqhD) ,
YqhC DNA-binding transcriptional activator ,
NADP+-dependent aldehyde reductase (yghA) ,
predicted maturation peptidase for hydrogenase 2 (hybD) ,
protein involved with the maturation of hydrogenases 1 and 2 (hybF) ,
hydrogenase 2 accessory protein (hybG) ,
disulfide reductase / organic hydroperoxide reductase (yghU) ,
Gss ,
predicted protein with nucleoside triphosphate hydrolase domain (yghT) ,
predicted protein with nucleoside triphosphate hydrolase domain (yghS) ,
predicted protein with nucleoside triphosphate hydrolase domain (yghR) ,
IS5 transposase and trans-activator (insH-9) ,
GlcC transcriptional dual regulator ,
glycolate oxidase, predicted FAD-linked subunit (glcD) ,
glycolate oxidase, predicted iron-sulfur subunit (glcF) ,
malate synthase G (glcB) ,
ornithine decarboxylase, biosynthetic (speC) ,
protein that protects iron-sulfur proteins against oxidative damage (yggX) ,
tRNA m7G46 methyltransferase (trmI) ,
predicted protein (yggL) ,
predicted oxidoreductase (yggW) ,
RdgB ,
predicted enzyme (yggS) ,
predicted transporter (yggR) ,
predicted transcription antitermination factor (yqgF) ,
predicted protein (yqgE) ,
16S rRNA m3U1498 methyltransferase monomer (rsmE) ,
conserved protein (yggI) ,
SpeB ,
transketolase I (tktA) ,
predicted PTS permease - CmtB subunit ,
fructose-1,6-bisphosphatase (yggF) ,
predicted DNA-binding transcriptional regulator (yggD) ,
conserved protein with nucleoside triphosphate hydrolase domain (yggC) ,
phosphoglycerate kinase (pgk) ,
predicted DNA-binding transcriptional regulator LYSR-type (ygfI) ,
propionyl-CoA:succinate CoA transferase (scpC) ,
GTPase that interacts with methylmalonyl-CoA mutase (argK) ,
ScpA ,
ArgP transcriptional activator ,
conserved protein (yqfE) ,
predicted protein (ygfB) ,
2-octaprenyl-6-methoxyphenol hydroxylase (ubiH) ,
2-octaprenylphenol hydroxylase (ubiI) ,
aminomethyltransferase (gcvT) ,
glycine cleavage system H protein (gcvH) ,
predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain (ygfF) ,
6-phospho-β-glucosidase A (bglA) ,
conserved protein (yqfB) ,
folate-binding protein (ygfZ) ,
FAD assembly factor (sdhE) ,
site-specific recombinase (xerD) ,
RecJ ,
isopentenyl diphosphate isomerase (idi) ,
fused predicted oxidoreductase, Fe-S subunit and nucleotide-binding subunit (ygfT) ,
guanine deaminase (guaD) ,
predicted chlorohydrolase/aminohydrolase (ssnA) ,
predicted oxidoreductase, Fe-S subunit (ygfK) ,
conserved protein with NAD(P)-binding Rossman fold (yqeB) ,
predicted amino acid kinase (yqeA) ,
phenylhydantoinase (hyuA) ,
predicted peptidase (ygeY) ,
2,3-diaminopropionate ammonia-lyase (ygeX) ,
predicted carbamoyltransferase (ygeW) ,
putative transcriptional regulator (ygeV) ,
xanthine dehydrogenase, Fe-S subunit (xdhC) ,
xanthine dehydrogenase subunit, FAD-binding domain (xdhB) ,
predicted protein (ygeP) ,
IS2 insertion element repressor InsA (insC-4) ,
predicted protein (ygeO) ,
predicted protein (ygeM) ,
predicted protein (ygeL) ,
predicted DNA-binding transcriptional regulator (ygeK) ,
predicted chaperone (ygeG) ,
predicted transcriptional regulator (yqeI) ,
conserved protein with bipartite regulator domain (yqeH) ,
predicted acyltransferase (yqeF) ,
predicted 2-keto-3-deoxy-D-gluconate dehydrogenase (kduD) ,
predicted racemase (ygeA) ,
LysA ,
GalR DNA-binding transcriptional dual regulator ,
putative NAD(P)-linked reductase that acts in starvation-associated mutation ,
RNA pyrophosphohydrolase (rppH) ,
phosphoenolpyruvate-protein phosphotransferase PtsP, enzyme INtr ,
thymidylate synthase (thyA) ,
conserved protein (ppdB) ,
RecC ,
RecB ,
RecD ,
CSD sulfur transfer protein (csdE) ,
cysteine sulfinate desulfinase (csdA) ,
FucA ,
L-1,2-propanediol oxidoreductase (fucO) ,
flap endonuclease (ygdG) ,
7-cyano-7-deazaguanine reductase (queF) ,
conserved protein (yqcC) ,
tRNA pseudouridine 65 synthase (truC) ,
glucarate dehydratase-related protein (gudX) ,
D-glucarate dehydratase (gudD) ,
23S rRNA m5U1939 methyltransferase (rlmD) ,
MazE antitoxin of the MazF-MazE toxin-antitoxin system ,
MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity ,
nucleoside triphosphate pyrophosphohydrolase (mazG) ,
conserved protein (queE) ,
predicted deoxygluconate dehydrogenase (ygcW) ,
predicted FAD-containing dehydrogenase (ygcU) ,
predicted flavoprotein (ygcR) ,
predicted anti-terminator regulatory protein (ygcP) ,
predicted 4Fe-4S cluster-containing protein (ygcO) ,
predicted oxidoreductase with FAD/NAD(P)-binding domain (ygcN) ,
6-carboxy-5,6,7,8-tetrahydropterin synthase (queD) ,
CysH ,
protein involved in CRISPR R-loop formation and dissociation (cas3) ,
Cascade subunit C ,
Cascade subunit D (casD) ,
predicted endoribonuclease (cas2) ,
sulfate adenylyltransferase, CysD subunit ,
sulfate adenylyltransferase, CysN subunit ,
CysC ,
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase monomer (ispF) ,
tRNA pseudouridine 13 synthase (truD) ,
broad specificity 5'(3')-nucleotidase and polyphosphatase (umpG) ,
conserved protein (ygbM) ,
predicted class II aldolase (ygbL) ,
predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain (ygbJ) ,
predicted DNA-binding transcriptional regulator, DEOR-type (ygbI) ,
hydrogenase maturation protein, carbamoyl dehydratase (hypE) ,
HypD, scaffold protein for assembly of the Fe-(CN)2CO cofactor ,
HypC, protein involved in hydrogenase 3 maturation ,
accessory protein for nickel incorporation into hydrogenase isoenzymes (hypB) ,
accessory protein for nickel incorporation into hydrogenase 3 (hypA) ,
regulator of the transcriptional regulator FhlA (hycA) ,
hydrogenase 3, Fe-S subunit (hycB) ,
formate hydrogenlyase complex iron-sulfur protein (hycF) ,
hydrogenase 3 and formate hydrogenlyase complex, HycG subunit ,
protein required for maturation of hydrogenase 3 (hycH) ,
hydrogenase 3 maturation protease (hycI) ,
6-phospho-β-glucosidase; cryptic (ascB) ,
putative electron transport protein HydN ,
NADH:flavorubredoxin reductase (norW) ,
flavorubredoxin (norV) ,
NorR DNA-binding transcriptional dual regulator ,
GutR DNA-binding transcriptional repressor (srlR) ,
SrlD ,
sorbitol PTS permease - SrlB subunit ,
NMN aminohydrolase (pncC) ,
regulatory protein RecX; inhibitor of RecA ,
carbon storage regulator; pleiotropic regulatory protein for carbon source metabolism (csrA) ,
fructose-1-phosphatase (yqaB) ,
γ-glutamate-cysteine ligase (gshA) ,
S-ribosylhomocysteine lyase (luxS) ,
flavodoxin involved in dimanganese-tyrosyl radical cofactor maintenance for ribonucleotide reductase (nrdI) ,
glutaredoxin-like protein (nrdH) ,
predicted protein (ygaC) ,
predicted DNA-binding transcriptional regulator (ygaV) ,
CsiR DNA-binding transcriptional repressor ,
4-aminobutyrate aminotransferase monomer (gabT) ,
GabD ,
predicted protein (csiD) ,
CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system ,
CP4-57 prophage; predicted antitoxin of the YpjF-YfjZ toxin-antitoxin system ,
CP4-57 prophage; predicted DNA repair protein (yfjY) ,
CP4-57 prophage; predicted antirestriction protein (yfjX) ,
CP4-57 prophage; conserved protein (yfjU) ,
CP4-57 prophage; predicted inner membrane protein (ypjK) ,
CP4-57 prophage; predicted DNA-binding transcriptional regulator (yfjR) ,
CP4-57 prophage; predicted protein (yfjQ) ,
CP4-57 prophage; antitoxin of the RnlA-RnlB toxin-antitoxin system ,
CP4-57 prophage; predicted protein (yfjL) ,
CP4-57 prophage; conserved protein; mutations lead to radiation resistance (yfjK) ,
CP4-57 prophage; predicted protein (yfjI) ,
AlpA DNA-binding transcriptional activator; CP4-57 prophage ,
CP4-57 prophage; predicted protein (yfjH) ,
CP4-57 prophage; integrase (intA) ,
small protein B (smpB) ,
protein component of the signal recognition particle (SRP) (ffh) ,
30S ribosomal subunit protein S16 (rpsP) ,
ribosome maturation protein (rimM) ,
tRNA m1G37 methyltransferase (trmD) ,
50S ribosomal subunit protein L19 (rplS) ,
predicted periplasmic protein involved in swarming motility (yfiR) ,
AroF ,
stationary phase translation inhibitor and ribosome stability factor (raiA) ,
conserved protein (yfiH) ,
PssA ,
predicted methyltransferase (yfiF) ,
stress-induced alternate pyruvate formate-lyase subunit (grcA) ,
predicted DNA-binding transcriptional regulator LYSR-type (yfiE) ,
tRNA m6A37 methyltransferase (yfiC) ,
L-aspartate oxidase (nadB) ,
RNase III (rnc) ,
AcpS ,
predicted 4Fe-4S cluster-containing protein (yfhL) ,
predicted DNA-binding transcriptional regulator (yfhH) ,
tRNA-specific adenosine deaminase monomer (tadA) ,
predicted DNA-binding transcriptional regulator, NAGC-like (yphH) ,
conserved protein (yphG) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (yphC) ,
3-phenylpropionate dioxygenase, predicted ferredoxin reductase subunit (hcaD) ,
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase (hcaB) ,
3-phenylpropionate dioxygenase, β subunit (hcaF) ,
HcaR transcriptional dual regulator ,
stationary phase inducible protein (csiE) ,
tRNA Cm32/Um32 methyltransferase (trmJ) ,
IscR DNA-binding transcriptional dual regulator ,
cysteine desulfurase monomer (iscS) ,
scaffold protein for iron-sulfur cluster assembly (iscU) ,
iron-sulfur cluster assembly protein (iscA) ,
co-chaperone for [Fe-S] cluster biosynthesis (hscB) ,
reduced ferredoxin (fdx) ,
regulator of iron-sulfur cluster assembly (iscX) ,
overproduction causes enhanced serine sensitivity (sseB) ,
3-mercaptopyruvate:cyanide sulfurtransferase [multifunctional] (sseA) ,
Ndk ,
23S rRNA m2A2503 methyltransferase and tRNA m2A37 methyltransferase (rlmN) ,
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (ispG) ,
predicted protein (yfgJ) ,
exonuclease VII, large subunit (xseA) ,
conserved protein, involved in DNA damage response (yfgI) ,
regulator of DnaA that prevents premature reinitiation of DNA replication (hda) ,
predicted oxidoreductase (yfgD) ,
hydrogenase 4 component J, putative protein processing element (hyfJ) ,
esterase (ypfH) ,
N-succinyl-L-diaminopimelate desuccinylase subunit (dapE) ,
conserved protein (yffB) ,
putative oxidoreductase, Fe-S subunit (aegA) ,
GDP-mannose hydrolase (nudK) ,
transketolase II (tktB) ,
transaldolase A (talA) ,
conserved protein with nucleoside triphosphate hydrolase domain (eutP) ,
predicted cobalamine adenosyltransferase in ethanolamine utilization (eutT) ,
phosphate acetyltransferase monomer (eutD) ,
predicted structural protein, ethanolamine utilization microcompartment (eutM) ,
predicted carboxysome structural protein (eutN) ,
predicted aldehyde dehydrogenase, ethanolamine utilization protein (eutE) ,
predicted chaperonin, ethanolamine utilization protein (eutJ) ,
predicted alcohol dehydrogenase in ethanolamine utilization (eutG) ,
ethanolamine ammonia-lyase, α subunit (eutB) ,
ethanolamine ammonia-lyase, β subunit (eutC) ,
predicted structural protein, ethanolamine utilization microcompartment (eutK) ,
putative ARAC-type regulatory protein (eutR) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (ypeA) ,
porphyrinogen peroxidase (yfeX) ,
N-acetylmuramic acid 6-phosphate etherase (murQ) ,
CysM ,
predicted protein (yfeK) ,
PdxK ,
HPr (ptsH) ,
predicted protein (ypeB) ,
predicted DNA-binding transcriptional regulator, LYSR-type (yfeR) ,
xanthosine phosphorylase (xapA) ,
predicted DNA-binding transcriptional regulator (yfeD) ,
predicted DNA-binding transcriptional regulator (yfeC) ,
predicted IS186/IS421 transposase (insL-3) ,
conserved protein (ypeC) ,
predicted PTS permease - FryB subunit ,
aminopeptidase (ypdF) ,
broad-specificity exoaminopeptidase (ypdE) ,
fused predicted PTS enzyme: Hpr component / enzyme I component / enzyme IIA component (fryA) ,
predicted ARAC-type regulatory protein (ypdC) ,
YpdB transcriptional regulator ,
glutamate-pyruvate aminotransferase (alaC) ,
formyl-CoA transferase monomer (frc) ,
acetyl-CoA:oxalate CoA-transferase (yfdE) ,
DsdC DNA-binding transcriptional dual regulator ,
predicted protein (ypdJ) ,
CPS-53 (KpLE1) prophage; predicted protein (yfdT) ,
CPS-53 (KpLE1) prophage; deoxyribonucleoside 5'-monophosphate phosphatase (yfdR) ,
CPS-53 (KpLE1) prophage; predicted protein (yfdP) ,
CPS-53 (KpLE1) prophage; predicted defective phage replication protein O (yfdO) ,
CPS-53 (KpLE1) prophage; predicted protein (yfdN) ,
CPS-53 (KpLE1) prophage; prophage CPS-53 integrase (intS) ,
predicted protein (yfdF) ,
conserved protein (yfcZ) ,
FadI monomer ,
FadJ monomer ,
phosphohistidine phosphatase (sixA) ,
conserved protein, predicted endonuclease (smrB) ,
protein-glutamine N-methyltransferase (prmB) ,
AroC ,
EF-P-Lys34 hydroxylase (epmC) ,
fused 5-methylaminomethyl-2-thiouridine-forming methyltransferase and FAD-dependent demodification enzyme (mnmC) ,
erythronate-4-phosphate dehydrogenase (pdxB) ,
predicted semialdehyde dehydrogenase (usg) ,
bifunctional folylpolyglutamate synthetase / dihydrofolate synthetase (folC) ,
3-octaprenyl-4-hydroxybenzoate decarboxylase together with UbiG (ubiX) ,
conserved protein (yfcI) ,
conserved protein with NAD(P)-binding Rossmann-fold domain (yfcH) ,
dihydroneopterin triphosphate 2'-epimerase monomer (folX) ,
disulfide bond reductase (yfcG) ,
glutathione S-transferase (yfcF) ,
phosphodiesterase (yfcE) ,
predicted Nudix hydrolase (yfcD) ,
Pta ,
conserved protein (yfbU) ,
sugar phosphatase (yfbT) ,
glutamate-pyruvate aminotransferase (alaA) ,
LrhA DNA-binding transcriptional dual regulator ,
predicted protein (yfbP) ,
predicted protein (yfbO) ,
predicted protein (yfbN) ,
predicted protein (yfbM) ,
Rbn ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (elaA) ,
MenF ,
MenB ,
o-succinylbenzoate synthase (menC) ,
MenE ,
polymyxin B resistance protein (pmrD) ,
conserved protein (arnD) ,
fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4''-decarboxylase (arnA) ,
pyrimidine deoxynucleoside triphosphate pyrophosphohydrolase (nudI) ,
conserved protein (yfaY) ,
predicted DNA-binding transcriptional regulator (yfaX) ,
L-rhamnonate dehydratase (yfaW) ,
2-keto-3-deoxy-L-rhamnonate aldolase (yfaU) ,
conserved protein (yfaD) ,
anaerobic glycerol-3-phosphate dehydrogenase subunit B (glpB) ,
pH-inducible protein involved in stress response (inaA) ,
2Fe-2S cluster-containing protein involved in diferric-tyrosyl radical cofactor maintenance (yfaE) ,
ribonucleoside diphosphate reductase 1, α subunit (nrdA) ,
AtoB ,
acetyl-CoA:acetoacetyl-CoA transferase, β subunit (atoA) ,
Ada DNA-binding transcriptional dual regulator ,
membrane anchored periplasmic heme chaperone CcmE ,
IS5 transposase and trans-activator (insH-8) ,
nucleoid-associated protein (yejK) ,
50S ribosomal subunit protein L25 (rplY) ,
predicted ATP-dependent helicase (yejH) ,
zinc-binding GTPase (yeiR) ,
predicted dehydrogenase, NAD-dependent (yeiQ) ,
predicted dehydrogenase, NAD-dependent (yeiP) ,
1-phosphofructokinase monomer (fruK) ,
predicted pseudouridine kinase (psuK) ,
YeiL DNA-binding transcriptional activator ,
ribonucleoside hydrolase 2 (pyrimidine-specific) (rihB) ,
predicted kinase (yeiI) ,
endonuclease IV (nfo) ,
LYSR-type transcriptional regulator (yeiE) ,
GTP cyclohydrolase I monomer (folE) ,
GalS DNA-binding transcriptional dual regulator ,
NADH-dependent dihydropyrimidine dehydrogenase subunit (preA) ,
tRNA-dihydrouridine synthase C (dusC) ,
predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain (yohF) ,
MlrA DNA binding transcriptional activator ,
YehT ,
conserved protein (yehS) ,
predicted protein (yehQ) ,
conserved protein (yehP) ,
predicted protein (yehM) ,
predicted transporter subunit: ATP-binding component of ABC superfamily (yehL) ,
predicted protein (yehK) ,
putative ATPase (mrp) ,
RcnR DNA-binding transcriptional repressor ,
hydroxyethylthiazole kinase (thiM) ,
ThiD ,
predicted DNA-binding transcriptional regulator (yegW) ,
predicted kinase (yegV) ,
predicted hydrolase (yegU) ,
galactitol-1-phosphate dehydrogenase (gatD) ,
IS3 element protein InsE (insE-5) ,
DNA-binding transcriptional regulator, prophage P2 remnant (ogrK) ,
actin family protein (yegD) ,
uridine kinase / cytidine kinase (udk) ,
Dcd ,
predicted colanic acid biosynthesis glycosyl transferase (wcaA) ,
predicted colanic acid biosynthesis acyl transferase (wcaB) ,
predicted colanic acid biosynthesis glycosyl transferase (wcaC) ,
predicted colanic acid biosynthesis glycosyl transferase (wcaE) ,
predicted acyl transferase (wcaF) ,
Gmm ,
predicted colanic biosynthesis glycosyl transferase (wcaI) ,
mannose-1-phosphate guanylyltransferase (cpsB) ,
predicted colanic acid biosynthesis pyruvyl transferase (wcaK) ,
predicted colanic biosynthesis glycosyl transferase (wcaL) ,
predicted colanic acid biosynthesis protein (wcaM) ,
dTDP-4-dehydrorhamnose reductase (rfbD) ,
UDP-galactopyranose mutase (glf) ,
predicted acyl transferase (wbbJ) ,
IS5 transposase and trans-activator (insH-7) ,
Gnd ,
Ugd ,
phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase (hisI) ,
imidazole glycerol phosphate synthase, HisF subunit ,
N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (hisA) ,
imidazole glycerol phosphate synthase, HisH subunit ,
HisB ,
HisC ,
HisD ,
HisG ,
his operon leader peptide (hisL) ,
toxin of the YoeB-YefM toxin-antitoxin pair ,
predicted epimerase, with NAD(P)-binding Rossmann-fold domain (yeeZ) ,
predicted DNA-binding transcriptional regulator (yeeY) ,
conserved protein (yeeD) ,
exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase (sbcB) ,
conserved protein (yeeX) ,
conserved protein (yoeF) ,
CP4-44 prophage; predicted protein (yeeW) ,
CP4-44 prophage; toxin of the CbtA-CbeA toxin-antitoxin system ,
CP4-44 prophage; predicted DNA repair protein (yeeS) ,
CP4-44 prophage; IS2 insertion element repressor InsA (insC-3) ,
CP4-44 prophage; IS5 transposase and trans-activator (insH-6) ,
CobU ,
CobT ,
conserved protein (yeeN) ,
predicted DNA-binding response regulator in two-component system with YedV (yedW) ,
predicted phosphohydrolase (yedJ) ,
DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway (vsr) ,
predicted protein (yodC) ,
predicted phosphatase (yedP) ,
flagellar biosynthesis protein FliH ,
predicted acyltransferase (yedL) ,
conserved protein (yedF) ,
FliZ DNA-binding transcriptional regulator ,
predicted protein (yecR) ,
predicted protein (yecJ) ,
universal stress protein (uspC) ,
arginyl-tRNA synthetase (argS) ,
predicted metal-binding enzyme (yecM) ,
tRNA U34 carboxymethyltransferase (cmoB) ,
carboxy-S-adenosyl-L-methionine synthase (cmoA) ,
conserved protein (yecE) ,
predicted hydrolase (yecD) ,
dihydroneopterin triphosphate pyrophosphohydrolase (nudB) ,
conserved protein (yebC) ,
predicted protein (yebB) ,
predicted DNA-binding transcriptional regulator (yebK) ,
conserved protein (yobB) ,
protein phosphatase 1 modulates phosphoproteins, signals protein misfolding (pphA) ,
16S rRNA m5C1407 methyltransferase (rsmF) ,
free methionine-(R)-sulfoxide reductase (msrC) ,
negative feedback regulator of the PhoQP system (mgrB) ,
stress protein, member of the CspA family (cspC) ,
predicted NUDIX hydrolase with low 3-phosphohydroxypyruvate phosphatase activity (nudL) ,
PabB ,
conserved protein (yoaH) ,
conserved protein (yoaB) ,
protein involved in threonylcarbamoyladenosine biosynthesis (tsaB) ,
predicted oxidoreductase (yeaX) ,
2Fe-2S cluster-containing protein (yeaW) ,
D-malate / 3-isopropylmalate dehydrogenase (decarboxylating) (dmlA) ,
DmlR DNA-binding transcriptional regulator ,
conserved protein (yeaR) ,
predicted DNA-binding transcriptional regulator (yeaM) ,
conserved protein (yeaK) ,
conserved protein (yeaH) ,
protein kinase (yeaG) ,
methylglyoxal reductase (yeaE) ,
conserved protein (yeaD) ,
conserved protein (yeaC) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ydjL) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ydjJ) ,
predicted aldolase (ydjI) ,
predicted kinase (ydjH) ,
methylglyoxal reductase (NADH-dependent) (ydjG) ,
predicted DNA-binding transcriptional regulator (ydjF) ,
nicotinamidase / pyrazinamidase (pncA) ,
predicted oxidoreductase (ydjA) ,
selenide, water dikinase (selD) ,
GdhA ,
5-hydroxy-CTP diphosphatase (nudG) ,
exonuclease III (xthA) ,
succinylornithine transaminase (astC) ,
arginine succinyltransferase (astA) ,
aldehyde dehydrogenase (astD) ,
AstB ,
succinylglutamate desuccinylase (astE) ,
endonuclease of nucleotide excision repair (cho) ,
NadE ,
chito-oligosaccharide mono-deacetylase (chbG) ,
cell division modulator (cedA) ,
2-deoxyglucose-6-phosphatase (yniC) ,
predicted phosphotransferase/kinase (yniA) ,
50S ribosomal subunit protein L35 (rpmI) ,
50S ribosomal subunit protein L20 (rplT) ,
conserved protein (ydiU) ,
AroH ,
PEP synthetase regulatory protein (ppsR) ,
phosphoenolpyruvate synthetase (ppsA) ,
short chain acyl-CoA synthetase (fadK) ,
predicted 4Fe-4S ferredoxin-type protein (ydiT) ,
predicted oxidoreductase with FAD/NAD(P)-binding domain (ydiS) ,
predicted DNA-binding transcriptional regulator (ydiP) ,
predicted enoyl-CoA reductase (ydiO) ,
fused predicted acetyl-CoA:acetoacetyl-CoA transferase: α subunit/β subunit (ydiF) ,
AroD ,
YdiB ,
1,4-dihydroxy-2-naphthoyl-CoA thioesterase (menI) ,
predicted protein (ydhZ) ,
predicted mono-oxygenase (ydhR) ,
RibC ,
protein with similarity to transcriptional regulators (ydhB) ,
PurR ,
Rnt ,
glyoxalase I (gloA) ,
N-ethylmaleimide reductase, FMN-linked (nemA) ,
NemR DNA-binding transcriptional repressor ,
conserved protein (ydhL) ,
predicted oxidoreductase (ydhF) ,
PdxH ,
pyridoxal kinase 2 (pdxY) ,
H-NS- and StpA-binding protein (cnu) ,
predicted oxidoreductase (ydgJ) ,
β-D-glucuronidase (uidA) ,
fumarase C monomer (fumC) ,
dihydromonapterin reductase / dihydrofolate reductase (folM) ,
predicted DNA-binding transcriptional regulator (ynfL) ,
predicted dethiobiotin synthetase (ynfK) ,
DMS reductase maturation protein (dmsD) ,
mannonate/altronate dehydratase (rspA) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (rspB) ,
Qin prophage; predicted defective integrase (intQ) ,
Qin prophage; predicted transposase (insD) ,
Qin prophage; predicted protein (ydfE) ,
Qin prophage; cell division inhibition protein (dicB) ,
DicA DNA-binding transcriptional dual regulator ,
RelB Qin prophage; antitoxin of the RelE-RelB toxin-antitoxin system and DNA binding transcriptional repressor ,
Qin prophage; predicted protein (rem) ,
Qin prophage; predicted protein (ydfU) ,
Qin prophage; predicted antitermination protein Q (ydfT) ,
Qin prophage; cold shock protein (cspF) ,
Qin prophage; cold shock protein; predicted DNA-binding transcriptional regulator (cspB) ,
Qin prophage; predicted protein (ydfR) ,
Qin prophage; conserved protein (ydfP) ,
Qin prophage; cold shock protein (cspI) ,
Qin prophage; predicted protein (ynfN) ,
Qin prophage; predicted protein (ynfO) ,
Qin prophage; predicted packaging protein (nohA) ,
Qin prophage; predicted tail fibre assembly protein (tfaQ) ,
Qin prophage; predicted site-specific recombinase (pinQ) ,
predicted mannonate dehydrogenase (ydfI) ,
conserved protein (ydfZ) ,
YdfH DNA-binding transcriptional repressor ,
3-hydroxy acid dehydrogenase monomer (ydfG) ,
dipeptidyl carboxypeptidase II (dcp) ,
conserved protein (ydeJ) ,
diguanylate cyclase (dgcZ) ,
predicted DNA-binding transcriptional regulator, LysR-type (yneJ) ,
Sad ,
altronate oxidoreductase (uxaB) ,
predicted class I aldolase (lsrF) ,
LsrR ,
autoinducer-2 kinase (lsrK) ,
YdeO DNA-binding transcriptional dual regulator ,
predicted anaerobic sulfatase maturation enzyme (ydeM) ,
diguanylate cyclase (dosC) ,
D-Ala-D-Ala dipeptidase (ddpX) ,
osmotically inducible peroxidase OsmC ,
30S ribosomal subunit protein S22 (sra) ,
ethanol dehydrogenase / alcohol dehydrogenase (adhP) ,
predicted DNA-binding transcriptional regulator (yddM) ,
nitrate reductase Z, β subunit (narY) ,
conserved protein (yddE) ,
arylamine N-acetyltransferase (nhoA) ,
conserved protein (yddH) ,
probable 4-oxalocrotonate tautomerase (4-OT) monomer (pptA) ,
conserved protein (ydcC) ,
predicted protein (yncI) ,
RhsE protein in rhs element ,
predicted enzyme (yncG) ,
McbR DNA-binding transcriptional dual regulator ,
NADPH-dependent curcumin/dihydrocurcumin reductase subunit (curA) ,
L-amino acid N-acyltransferase (mnaT) ,
hypothetical protein (ydcY) ,
γ-aminobutyraldehyde dehydrogenase (patD) ,
fused predicted DNA-binding transcriptional regulator and predicted amino transferase (ydcR) ,
antitoxin of the HicA-HicB toxin-antitoxin system ,
predicted protein (yncJ) ,
predicted peptidase (ydcP) ,
predicted DNA-binding transcriptional regulator (ydcN) ,
tellurite methyltransferase (tehB) ,
predicted enzyme (ydcK) ,
conserved protein (ydcJ) ,
YdcI DNA-binding transcriptional repressor ,
AldA ,
conserved protein (ydcF) ,
NADH:quinone oxidoreductase, FMN-dependent (azoR) ,
predicted oxidoreductase, NAD(P)-binding (ydbC) ,
transposase of IS30 (insI-2) ,
IS2 insertion element repressor InsA (insC-2) ,
2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase (paaY) ,
PaaX ,
phenylacetate-CoA ligase (paaK) ,
β-ketoadipyl-CoA thiolase (paaJ) ,
phenylacetyl-CoA thioesterase (paaI) ,
predicted ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (paaG) ,
ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit (paaE) ,
ring 1,2-phenylacetyl-CoA epoxidase, structural subunit (paaC) ,
ring 1,2-phenylacetyl-CoA epoxidase, monooxygenase subunit (paaA) ,
FeaB ,
predicted lipoprotein (ynbE) ,
D-lactate dehydrogenase - fermentative (ldhA) ,
Rac prophage; predicted site-specific recombinase (pinR) ,
Rac prophage; predicted tail fiber assembly protein (tfaR) ,
Rac prophage; IS5 transposase and trans-activator (insH-5) ,
Rac prophage; conserved protein (ynaK) ,
Rac prophage; predicted defective peptidase (rzpR) ,
Rac prophage; predicted DNA-binding protein (ydaW) ,
Rac prophage; predicted DNA replication protein (ydaV) ,
Rac prophage; conserved protein (ydaU) ,
Rac prophage; predicted DNA-binding transcriptional regulator (racR) ,
Rac prophage; small protein (ydaG) ,
Rac prophage; inhibitor of FtsZ, killing protein (kilR) ,
Rac prophage; predicted protein (racC) ,
recombinase, DNA renaturation (recT) ,
Rac prophage; predicted integrase (intR) ,
tRNA C32 thiolase (ttcA) ,
conserved protein with endonuclease activity (smrA) ,
p-aminobenzoyl-glutamate hydrolase subunit A (abgA) ,
p-aminobenzoyl-glutamate hydrolase subunit B (abgB) ,
O6-alkylguanine-DNA-alkyltransferase (ogt) ,
IS5 transposase and trans-activator (insH-4) ,
PgrR DNA-binding transcriptional repressor ,
L-Ala-D/L-Glu epimerase (ycjG) ,
TyrR DNA-binding transcriptional dual regulator ,
conserved protein (ycjX) ,
predicted DNA-binding transcriptional regulator, LacI type (ycjW) ,
predicted protein (ymjB) ,
β-phosphoglucomutase (ycjU) ,
predicted hydrolase (ycjT) ,
predicted enzyme (ycjR) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ycjQ) ,
predicted glucosyltransferase (ycjM) ,
PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair ,
regulatory protein for the phage shock protein operon (pspA) ,
γ-glutamylputrescine oxidase (puuB) ,
PuuR DNA-binding transcriptional repressor ,
γ-glutamyl-γ-aminobutyrate hydrolase (puuD) ,
glutamate-putrescine ligase (puuA) ,
predicted protein (ymjA) ,
ATP binding protein SapF of predicted ABC transporter ,
ribonuclease II (rnb) ,
DNA-binding transcriptional regulator (yciT) ,
translation initiation factor (yciH) ,
PyrF ,
lipopolysaccharide assembly protein LapB ,
aconitate hydratase 1 (acnA) ,
CysB ,
predicted protein (yciN) ,
predicted oxidoreductase (yciK) ,
23S rRNA pseudouridine 2605 synthase (rluB) ,
conserved protein (yciO) ,
conserved protein (yciV) ,
anthranilate synthase component I (trpE) ,
predicted protein (yciG) ,
conserved protein (yciE) ,
acyl-CoA thioesterase (yciA) ,
predicted enzyme (yciI) ,
predicted protein (yciU) ,
thymidine kinase / deoxyuridine kinase (tdk) ,
H-NS DNA-binding transcriptional dual regulator (hns) ,
conserved protein (rssA) ,
conserved protein (ychJ) ,
predicted transcriptional regulator (ychA) ,
protein-(glutamine-N5) methyltransferase (prmC) ,
HemA ,
IspE ,
ribose-phosphate diphosphokinase (prs) ,
DhaR DNA-binding transcriptional dual regulator ,
dihydroxyacetone kinase subunit L (dhaL) ,
dihydroxyacetone kinase subunit M (dhaM) ,
DadX ,
conserved protein (ycgB) ,
conserved protein (ycgN) ,
predicted isomerase/hydrolase (ycgM) ,
membrane ATPase of the MinC-MinD-MinE system that regulates septum placement ,
protein involved in biofilm formation (ymgC) ,
regulator of acid resistance, influenced by indole (ariR) ,
BluR DNA-binding transcriptional repressor ,
restriction of DNA at 5-methylcytosine residues (mcrA) ,
e14 prophage; site-specific DNA recombinase (pinE) ,
e14 prophage; predicted tail fiber assembly protein (tfaE) ,
e14 prophage; predicted protein (ymfS) ,
e14 prophage; conserved protein (ymfP) ,
e14 prophage; predicted DNA-binding transcriptional regulator (ymfN) ,
e14 prophage; predicted DNA-binding transcriptional regulator (ymfL) ,
e14 prophage; predicted repressor protein (ymfK) ,
e14 prophage; predicted protein (ymfJ) ,
e14 prophage; predicted excisionase (xisE) ,
e14 prophage; predicted integrase ,
Lit, cell death peptidase; phage exclusion; e14 prophage ,
e14 prophage; predicted SAM-dependent methyltransferase (ymfD) ,
Icd ,
23S rRNA pseudouridine 2457 synthase (rluE) ,
nucleoside di- and triphosphate hydrolase [multifunctional] (nudJ) ,
ribosomal protein-arginine oxygenase (roxA) ,
peptidase T ,
protein-lysine deacetylase and desuccinylase (cobB) ,
ComR DNA-binding transcriptional repressor ,
conserved protein (ycfP) ,
thiamin kinase (thiK) ,
purine nucleoside phosphoramidase monomer (hinT) ,
predicted metallodependent hydrolase (ycfH) ,
dTMP kinase (tmk) ,
pabC ,
malonyl-CoA-ACP transacylase (fabD) ,
50S ribosomal subunit protein L32 (rpmF) ,
conserved protein (yceD) ,
m7GTP pyrophosphatase (yceF) ,
predicted oxidoreductase, NAD(P)-binding Rossmann-fold domain (yceM) ,
N-methyltryptophan oxidase (solA) ,
conserved protein (yceA) ,
acidic protein that suppresses heat sensitivity of a secY mutant (msyB) ,
O-acetyl-ADP-ribose deacetylase, regulator of RNase III activity (ymdB) ,
CsgD DNA-binding transcriptional dual regulator ,
curli transport specificity factor (csgE) ,
protein involved in maturation of YcdX (ycdY) ,
zinc-binding phosphatase (ycdX) ,
glyoxylate reductase / hydroxypyruvate reductase (ghrA) ,
IS3 element protein InsE (insE-4) ,
RutR DNA-binding transcriptional dual regulator ,
peroxyureidoacrylate / ureidoacrylate amido hydrolase (rutB) ,
flavin reductase (rutF) ,
conserved protein (ymdF) ,
chaperone modulator protein CbpM ,
predicted regulator of phosphatidylethanolamine synthesis (gnsA) ,
cold shock protein CspG ,
stress protein, member of the CspA family (cspH) ,
IS1 protein InsB (insB-4) ,
phosphotyrosine-protein phosphatase (etp) ,
protein involved in nickel incorporation into hydrogenase 1 proteins (hyaF) ,
protein involved in quality control of HyaA (hyaE) ,
protein involved in processing of HyaA and HyaB proteins (hyaD) ,
sulfur transfer protein (tusE) ,
acylphosphatase (yccX) ,
23S rRNA m5C1962 methyltransferase monomer (rlmI) ,
predicted CoA-binding protein with NAD(P)-binding Rossmann-fold domain (yccU) ,
conserved protein (yccT) ,
transcriptional coactivator for CRP (sxy) ,
macrodomain Ter protein (matP) ,
putative ATP-dependent protease (ycbZ) ,
FabA ,
dihydroorotate dehydrogenase, type 2 (pyrD) ,
NAD(P)H-dependent FMN reductase (ssuE) ,
nicotinate phosphoribosyltransferase (pncB) ,
asparaginyl-tRNA synthetase (asnS) ,
predicted metal-binding enzyme (ycbL) ,
cell division protein involved in chromosome partitioning (mukB) ,
predicted S-adenosylmethionine-dependent methyltransferase (smtA) ,
conserved protein (ycbJ) ,
conserved protein (ycaR) ,
conserved protein (ycaQ) ,
tetraacyldisaccharide 4'-kinase (lpxK) ,
cytidylate kinase (cmk) ,
3-phosphoshikimate-1-carboxyvinyltransferase (aroA) ,
protein involved in β-methylthiolation of ribosomal protein S12 (ycaO) ,
PflB ,
conserved protein (ycaK) ,
putative transcriptional regulator LYSR-type (ycaN) ,
recombination factor (rarA) ,
conserved protein with a nucleotide triphosphate hydrolase domain (ybjD) ,
hybrid-cluster protein (hcp) ,
predicted NAD(P)H-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain (ybjS) ,
conserved protein (ybjQ) ,
23S rRNA m5U747 methyltransferase (rlmC) ,
predicted oxidoreductase (ybjN) ,
ribosomal protein S6 modification protein (rimK) ,
NADPH nitroreductase (nfsA) ,
reduced glutaredoxin 1 (grxA) ,
RcdA DNA-binding transcriptional regulator ,
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase (ybjI) ,
glutathione S-transferase B (gstB) ,
regulator of biofilm formation (bssR) ,
ribosomal protein S12 D88 methylthiotransferase (rimO) ,
Fsa (fsaA) ,
predicted pyruvate formate lyase activating enzyme (ybiY) ,
predicted pyruvate formate lyase (ybiW) ,
sugar phosphatase (ybiV) ,
predicted protein (ybiU) ,
MntR ,
conserved protein (ybiX) ,
conserved protein (ybiI) ,
predicted dehydrogenase (ybiC) ,
predicted transferase/phosphorylase (ybiB) ,
ATP-dependent RNA helicase (rhlE) ,
predicted DNase (ybhP) ,
cardiolipin synthase 2 (clsB) ,
molybdopterin synthase large subunit (moaE) ,
molybdopterin synthase small subunit (moaD) ,
MoaB protein ,
predicted transferase with NAD(P)-binding Rossmann-fold domain (ybhK) ,
DNA repair; excision nuclease subunit B (uvrB) ,
dethiobiotin synthetase monomer (bioD) ,
malonyl-[acp] methyltransferase (bioC) ,
8-amino-7-oxononanoate synthase monomer (bioF) ,
adenosylmethionine-8-amino-7-oxononanoate aminotransferase monomer (bioA) ,
predicted hydratase (ybhJ) ,
predicted DNA-binding transcriptional regulator (ybhD) ,
small membrane protein that interacts with the AcrAB-TolC multidrug efflux pump (acrZ) ,
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase monomer (gpmA) ,
AroG ,
esterase/thioesterase (ybgC) ,
α-mannosidase (mngB) ,
succinyl-CoA synthetase, α subunit (sucD) ,
succinyl-CoA synthetase, β subunit ,
SucB ,
predicted lactam utilization protein (ybgL) ,
predicted enzyme subunit (ybgJ) ,
conserved metal-binding protein (ybgI) ,
conserved protein (ybgA) ,
putative DNA ligase (ybfD) ,
predicted transposase (ybfQ) ,
predicted protein (ybfC) ,
predicted protein (ybfA) ,
ornithine decarboxylase, degradative (speF) ,
SeqA, negative modulator of initiation of replication ,
LexA-regulated protein (ybfE) ,
flavodoxin 1 (fldA) ,
Fur ,
glucosamine-6-phosphate deaminase (nagB) ,
N-acetylglucosamine-6-phosphate deacetylase (nagA) ,
UMP phosphatase (umpH) ,
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase (ubiF) ,
isopentenyl-adenosine A37 tRNA methylthiolase (miaB) ,
predicted protein with nucleoside triphosphate hydrolase domain (ybeZ) ,
endoribonuclease involved in maturation of 16S rRNA and ribosome quality control (ybeY) ,
predicted ion transport protein (ybeX) ,
IS5 transposase and trans-activator (insH-3) ,
ribonucleoside hydrolase 1 (pyrimidine-specific) (rihA) ,
Hsc62, Hsp70 family chaperone, binds to RpoD and inhibits transcription (hscC) ,
Hsc56, co-chaperone of Hsc62 (djlC) ,
predicted chaperone (djlB) ,
predicted protein (ybeR) ,
nicotinate-mononucleotide adenylyltransferase (nadD) ,
predicted adenosylcobalamin phosphatase/α-ribazole phosphatase (cobC) ,
ribosomal silencing factor (rsfS) ,
lipoyl(octanoyl) transferase (lipB) ,
predicted DNA-binding transcriptional regulator, LYSR-type (ybeF) ,
predicted protein of C-N hydrolase superfamily, C-terminal fragment (ybeM_2) ,
predicted protein of C-N hydrolase superfamily, N-terminal fragment (ybeM_1) ,
citrate lyase synthetase (citC) ,
apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (citX) ,
triphosphoribosyl-dephospho-CoA synthase (citG) ,
regulator of nucleoside diphosphate kinase (rnk) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ybdR) ,
predicted DNA-binding transcriptional regulator LYSR-type (ybdO) ,
methionine-oxo-acid transaminase, PLP-dependent (ybdL) ,
predicted oxidoreductase (ybdH) ,
proofreading thioesterase in enterobactin biosynthesis (entH) ,
EntA ,
phosphopantetheinyl transferase (entD) ,
IS186/IS421 transposase (insL-2) ,
carboxylate-amine ligase (ybdK) ,
conserved protein (ybdF) ,
EnvY DNA-binding transcriptional activator ,
DLP12 prophage; predicted protein (tfaX) ,
DLP12 prophage; predicted SAM-dependent methyltransferase (ybcY) ,
DLP12 prophage; DNA packaging protein (nohB) ,
DLP12 prophage; predicted protein (ybcW) ,
DLP12 prophage; predicted protein (ybcV) ,
DLP12 prophage; predicted murein endopeptidase (rzpD) ,
DLP12 prophage; IS5 transposase and trans-activator (insH-2) ,
DLP12 prophage; predicted antitermination protein (ybcQ) ,
DLP12 prophage; predicted protein (ybcO) ,
DLP12 prophage; predicted DNA-binding transcriptional regulator (ybcM) ,
DLP12 prophage; predicted recombinase (ybcK) ,
DLP12 prophage; predicted protein (renD) ,
DLP12 prophage; IS3 element protein InsE (insE-3) ,
DLP12 prophage; predicted exonuclease (ybcC) ,
DLP12 prophage; predicted integrase (intD) ,
FimZ transcriptional regulator ,
predicted RNA-binding protein (ybcJ) ,
UDP-2,3-diacylglucosamine hydrolase (lpxH) ,
predicted carbamate kinase (ybcF) ,
predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain (fdrA) ,
ureidoglycolate dehydrogenase (allD) ,
allantoate amidohydrolase monomer (allC) ,
glycerate kinase II (glxK) ,
allantoinase monomer (allB) ,
tartronate semialdehyde reductase 2 (glxR) ,
ureidoglycolate lyase (allA) ,
tRNA 2-selenouridine synthase (ybbB) ,
conserved protein, rhs-like (ylbH) ,
CueR transcriptional dual regulator ,
predicted DNA-binding transcriptional regulator (ybaQ) ,
Cys-tRNAPro and Cys-tRNACys deacylase (ybaK) ,
Gsk ,
ferrochelatase (hemH) ,
conserved DNA-binding protein (ybaB) ,
small protein involved in the cell envelope stress response (ybaM) ,
haemolysin expression modulating protein (hha) ,
DNA base-flipping protein (atl) ,
predicted DNA-binding transcriptional regulator (ybaO) ,
pyridoxal phosphatase / HMP-PP hydrolase (cof) ,
thioesterase III (fadM) ,
nucleotide binding protein (yajQ) ,
2-dehydropantoate 2-reductase (panE) ,
chaperone, protecting proteins in response to oxidative stress (yajL) ,
ThiI ,
putative NAD(P)H-dependent xylose reductase (yajO) ,
thiamin monophosphate kinase (thiL) ,
RibE ,
fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (ribD) ,
NrdR ,
acyl carrier protein phosphodiesterase (acpH) ,
conserved protein (aroM) ,
anti-adaptor protein for σS stabilization (iraP) ,
predicted DNA-binding transcriptional regulator (yaiV) ,
IS3 element protein InsE (insE-2) ,
taurine dioxygenase monomer (tauD) ,
taurine ABC transporter - ATP binding subunit (tauB) ,
conserved protein (yaiS) ,
predicted protein (yaiF) ,
IS2 element protein (insD-1) ,
IS2 element protein InsA (insC-1) ,
regulator protein (frmR) ,
S-formylglutathione hydrolase (frmB) ,
4-hydroxy-2-ketovalerate aldolase (mhpE) ,
MhpD ,
2-hydroxy-6-ketonona-2,4-dienedioate hydrolase (mhpC) ,
3-(3-hydroxyphenyl)propionate 2-hydroxylase (mhpA) ,
galactoside O-acetyltransferase monomer (lacA) ,
cyanase monomer (cynS) ,
2-methylcitrate dehydratase (prpD) ,
PrpR DNA-binding transcriptional dual regulator ,
predicted carbamate kinase-like protein (yahI) ,
predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain (yahF) ,
predicted protein (yahE) ,
predicted transcriptional regulator with ankyrin domain (yahD) ,
predicted DNA-binding transcriptional regulator, LysR-type (yahB) ,
BetI DNA-binding transcriptional repressor ,
BetB ,
choline dehydrogenase (betA) ,
predicted transporter (ykgG) ,
predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain (ykgF) ,
predicted oxidoreductase (ykgE) ,
RclR DNA-binding transcriptional activator ,
predicted oxidoreductase with FAD/NAD(P)-binding domain and dimerization domain; hypochlorite stress response (rclA) ,
predicted protein, hypochlorite stress response (rclB) ,
predicted DNA-binding transcriptional regulator (ykgA) ,
IS3 element protein InsF (insF-1) ,
IS3 element protein InsE (insE-1) ,
predicted ribosomal protein (ykgM) ,
MatA DNA-binding transcriptional dual regulator (ecpR) ,
molybdenum cofactor insertion chaperone for PaoABC (paoD) ,
predicted transcriptional regulator LYSR-type (yagP) ,
CP4-6 prophage; predicted protein (yagM) ,
CP4-6 prophage; DNA-binding protein (yagL) ,
CP4-6 prophage; conserved protein (yagK) ,
CP4-6 prophage; predicted protein (yagJ) ,
CP4-6 prophage; predicted DNA-binding transcriptional regulator (yagI) ,
CP4-6 prophage; D-xylonate dehydratase (yagF) ,
CP4-6 prophage; probable 2-keto-3-deoxygluconate aldolase (yagE) ,
CP4-6 prophage; conserved protein (yagB) ,
predicted IS protein (ykgN) ,
IS1 protein InsB (insB-2) ,
homocysteine S-methyltransferase (mmuM) ,
CP4-6 prophage; IS5 transposase and trans-activator (insH-1) ,
CP4-6 prophage; conserved protein (ykfC) ,
transposase of IS30 (insI-1) ,
CP4-6 prophage; partial regulator of insertion element IS911A (insN-1) ,
PerR transcriptional regulator ,
CP4-6 prophage; predicted GTP-binding protein (ykfA) ,
CP4-6 prophage; conserved protein (yafZ) ,
CP4-6 prophage; predicted protein (yafX) ,
CP4-6 prophage; predicted DNA repair protein (ykfG) ,
antitoxin of the YkfI-YafW toxin-antitoxin pair ,
CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system ,
fermentation/respiration switch protein (frsA) ,
predicted peptide chain release factor (prfH) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (yafP) ,
ribosome-dependent mRNA interferase, toxin of the YafO-YafN toxin-antitoxin system ,
antitoxin of the YafO-YafN toxin-antitoxin system ,
DinJ antitoxin of YafQ-DinJ toxin-antitoxin system and DNA-binding transcriptional repressor ,
predicted amidotransferase (yafJ) ,
predicted C-N hydrolase family amidase, NAD(P)-binding (yafV) ,
predicted S-adenosyl-L-methionine-dependent methyltransferase (yafS) ,
glyoxalase II (gloB) ,
predicted S-adenosylmethionine-dependent methyltransferase (yafE) ,
predicted DNA-binding transcriptional regulator LYSR-type (yafC) ,
D,D-heptose 1,7-bisphosphate phosphatase (gmhB) ,
tRNA m6t6A37 methyltransferase (trmO) ,
peptidyl-tRNA hydrolase, ribosome rescue factor (arfB) ,
conserved protein (yaeP) ,
predicted lyase (yaeR) ,
LdcC ,
DNA polymerase III, α subunit (dnaE) ,
LpxD ,
Dxr ,
tetrahydrodipicolinate succinylase (dapD) ,
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase monomer (mtn) ,
2'-5' RNA ligase (ligT) ,
predicted DNA-binding transcriptional regulator of maltose metabolism (sfsA) ,
RNA polymerase-binding transcription factor DksA ,
glutamyl-Q tRNAAsp synthetase (gluQ) ,
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase (folK) ,
predicted transposase (yadD) ,
AgaX (yadI) ,
adenosylmethionine decarboxylase, proenzyme (speD) ,
conserved protein (yacL) ,
N-acetyl-anhydromuramyl-L-alanine-amidase (ampD) ,
quinolinate phosphoribosyltransferase (decarboxylating) monomer (nadC) ,
protein involved in plasmid replication (hofB) ,
cell division factor ZapD ,
DNA gyrase inhibitor YacG ,
essential cell division protein FtsA ,
UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase (murE) ,
MraZ DNA-binding transcriptional repressor ,
IlvH ,
IlvI ,
LeuD ,
SgrR DNA-binding transcriptional dual regulator ,
23S rRNA and tRNA pseudouridine synthase (rluA) ,
dihydrofolate reductase ,
regulator of KefC-mediated potassium transport and quinone oxidoreductase (kefF) ,
putative ferredoxin possibly involved in anaerobic carnitine metabolism (fixX) ,
flavoprotein (electron transport), possibly involved in anaerobic carnitine metabolism (fixC) ,
crotonobetainyl-CoA reductase (caiA) ,
carnitine-CoA ligase (caiC) ,
crotonobetainyl-CoA hydratase (caiD) ,
predicted acyl transferase (caiE) ,
carbamoyl phosphate synthetase, β chain ,
ribonucleoside hydrolase 3 (rihC) ,
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ispH) ,
isoleucyl-tRNA synthetase (ileS) ,
bifunctional riboflavin kinase / FMN adenylyltransferase (ribF) ,
30S ribosomal subunit protein S20 (rpsT) ,
IS1 protein InsB (insB-1) ,
NhaR transcriptional activator ,
IS186/IS421 transposase (insL-1) ,
MogA ,
thr operon leader peptide (thrL) ,
glutamate synthase, large subunit (gltB) ,
malate dehydrogenase, NAD-requiring (maeA) ,
6-phosphogluconolactonase (pgl) ,
regulator of FtsH protease (hflK) ,
inhibitor of g-type lysozyme (pliG) ,
predicted peptidase (yegQ) ,
membrane-bound lytic murein transglycosylase A (mltA) ,
NlpD divisome associated factor; activates peptidoglycan hydrolase ,
Qin prophage; predicted protein (gnsB) ,
conserved protein (ybeD) ,
3-octaprenyl-4-hydroxybenzoate carboxy-lyase monomer (ubiD) ,
conserved protein (ychN) ,
conserved protein (yejL) ,
MlaA ,
NAD(P)H:quinone oxidoreductase (ytfG) ,
predicted protein (yebY) ,
conserved protein (yceH) ,
conserved protein (creA) ,
protein involved in base analog detoxification (yiiM) ,
L-serine deaminase I (sdaA) ,
pyridoxal phosphatase / fructose 1,6-bisphosphatase (ybhA) ,
conserved protein (ygdH) ,
CPZ-55 prophage; predicted protein (yffS) ,
conserved protein (yaiE) ,
MbtH-like protein that enhances the catalytic function of EntF (ybdZ) ,
cell division factor ZapA, localizes to the cytokinetic ring ,
NADPH quinone reductase monomer (mdaB) ,
conserved protein (yjjA) ,
conserved protein (ytfP) ,
periplasmic protein involved in nickel/cobalt efflux (rcnB) ,
protein that reduces intracellular iron levels under peroxide stress (yaaA) ,
predicted protein (yccJ) ,
predicted enzyme subunit (ybgK) ,
conserved protein regulated by LexA (yebG) ,
predicted protein (yfcL) ,
malate:quinone oxidoreductase (mqo) ,
lipoprotein involved in cell division (nlpI) ,
surface exposed outer membrane lipoprotein (yaiW) ,
50S ribosomal subunit protein L11 (rplK) ,
50S ribosomal subunit protein L31 (rpmE) ,
RNase PH monomer (rph) ,
glutamate-1-semialdehyde aminotransferase (hemL) ,
alanyl-tRNA synthetase (alaS) ,
chitobiose PTS permease - ChbB subunit ,
chitobiose PTS permease - ChbA subunit ,
glucose PTS permease - PtsG subunit ,
galactitol PTS permease - GatA subunit ,
galactitol PTS permease - GatB subunit ,
stimulator of RavA ATPase activity (viaA) ,
chemotaxis protein methyltransferase (cheR) ,
CheW ,
protein involved in modification of U34 in tRNA (mnmG) ,
mannose PTS permease - ManX subunit ,
FolD ,
transaldolase B (talB) ,
chaperone and weak protein oxidoreductase (ybbN) ,
bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase (acnB) ,
5,10-methylenetetrahydrofolate reductase (metF) ,
putrescine aminotransferase (patA) ,
MAP kinase MEK ,
ERK ,
phospho-MEK ,
phospho-ERK ,
methylmalonyl-CoA decarboxylase (scpB) ,
tmRNA (ssrA) ,
tRNAvalY ,
tRNAvalX ,
tRNAvalW ,
tRNAvalV ,
tRNAvalU ,
tRNAvalT ,
tRNAvalZ ,
tRNAtyrV ,
tRNAtyrU ,
tRNAtyrT ,
tRNAtrpT ,
tRNAthrW ,
tRNAthrV ,
tRNAthrU ,
tRNAthrT ,
tRNAserX ,
tRNAserW ,
tRNAserV ,
tRNAserU ,
tRNAserT ,
tRNAsec (selC) ,
tRNAproM ,
tRNAproL ,
tRNAproK ,
tRNApheV ,
tRNApheU ,
tRNAmetZ ,
tRNAmetY ,
tRNAmetW ,
tRNAmetV ,
tRNAmetU ,
tRNAmetT ,
tRNAlysW ,
tRNAlysV ,
tRNAlysT ,
tRNAlysQ ,
tRNAlysZ ,
tRNAlysY ,
tRNAleuZ ,
tRNAleuX ,
tRNAleuW ,
tRNAleuV ,
tRNAleuU ,
tRNAleuT ,
tRNAleuQ ,
tRNAleuP ,
tRNAileX ,
tRNAileV ,
tRNAileU ,
tRNAileT ,
tRNAileY ,
tRNAhisR ,
tRNAglyY ,
tRNAglyX ,
tRNAglyW ,
tRNAglyV ,
tRNAglyU ,
tRNAglyT ,
tRNAgltW ,
tRNAgltV ,
tRNAgltU ,
tRNAgltT ,
tRNAglnX ,
tRNAglnW ,
tRNAglnV ,
tRNAglnU ,
tRNAcysT ,
tRNAaspV ,
tRNAaspU ,
tRNAaspT ,
tRNAasnV ,
tRNAasnU ,
tRNAasnT ,
tRNAasnW ,
tRNAargZ ,
tRNAargY ,
tRNAargX ,
tRNAargW ,
tRNAargV ,
tRNAargU ,
tRNAargQ ,
tRNAalaX ,
tRNAalaW ,
tRNAalaV ,
tRNAalaU ,
tRNAalaT ,
4.5S RNA component of the signal recognition particle (SRP) (ffs) ,
BirA-bio-5'-AMP DNA-binding transcriptional repressor ,
TorR transcriptional dual regulator ,
pyruvate formate-lyase (inactive) ,
NtrB sensory histidine kinase ,
NtrC transcriptional dual regulator ,
isochorismatase / aryl-carrier protein ,
superoxide dismutase (Mn) ,
NADH dehydrogenase (quinone) ,
nitrite reductase ,
xanthine-guanine phosphoribosyltransferase ,
glutathione reductase ,
glutamine synthetase ,
glyceraldehyde 3-phosphate dehydrogenase ,
fatty acid oxidation complex, α component ,
2,3-dihydroxybenzoate-AMP ligase ,
lipoamide dehydrogenase ,
pyruvate dehydrogenase ,
dimethyl sulfoxide reductase ,
purine nucleoside phosphorylase ,
KdpE-Phosphorylated DNA-binding transcriptional activator ,
CpxR-Pasp DNA-binding transcriptional dual regulator ,
lipid hydroperoxide peroxidase ,
DcuR-Phosphorylated DNA-binding transcriptional activator ,
acetohydroxy acid isomeroreductase ,
lipid A disaccharide synthase ,
copper binding protein CutA ,
primosomal replication protein N ,
ModE transcriptional dual regulator ,
MoaB protein ,
molybdopterin synthase ,
NADPH nitroreductase NfsA ,
inorganic pyrophosphatase ,
DNA gyrase ,
thiosulfate sulfurtransferase ,
DNA polymerase III, core enzyme ,
taurine dioxygenase ,
dihydroxyacetone kinase ,
HF-I, host factor for RNA phage Q β replication ,
bacterioferritin ,
sulfur acceptor for SufS cysteine desulfurase ,
carbonic anhydrase 1 ,
aspartate ammonia-lyase ,
aspartate aminotransferase, PLP-dependent ,
asparaginase I ,
α-galactosidase ,
fatty acyl-CoA synthetase ,
UvrY transcriptional regulator ,
UhpA transcriptional activator ,
reduced thioredoxin 2 (trxC) ,
2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive (tdcE) ,
RstA transcriptional regulator ,
PhoP ,
PhoB transcriptional dual regulator ,
NarP ,
NarL ,
rho operon leader peptide (rhoL) ,
leu operon leader peptide (leuL) ,
Pyr operon leader peptide (pyrL) ,
ilvB operon leader peptide (ivbL) ,
ilvGEDA operon leader peptide (ilvL) ,
KdpE transcriptional activator ,
ZraR transcriptional activator ,
PII (glnB) ,
succinate:quinone oxidoreductase, iron-sulfur cluster binding protein (sdhB) ,
fumarate reductase iron-sulfur protein (frdB) ,
EvgA transcriptional regulator ,
apo-serine activating enzyme (entF) ,
DcuR transcriptional activator ,
CpxR transcriptional dual regulator ,
chemotaxis regulator transmitting signal to flagellar motor component (cheY) ,
CheB ,
CheA ,
BasR transcriptional regulator ,
BaeR transcriptional regulator ,
AtoC transcriptional activator; Az protein inhibitor of ODC ,
ArcA transcriptional dual regulator ,
apo-[acyl carrier protein] (acpP) ,
XylA ,
subunit of undecaprenyl diphosphate synthase (ispU) ,
UDP-N-acetylenolpyruvoylglucosamine reductase (murB) ,
LpxA ,
UDP-N-acetylglucosamine 2-epimerase (rffE) ,
UDP-3-O-acyl-N-acetylglucosamine deacetylase (lpxC) ,
D-alanyl-D-alanine-adding enzyme (murF) ,
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase (murD) ,
pyridine nucleotide transhydrogenase, soluble (sthA) ,
TyrB ,
tryptophan synthase, β subunit (trpB) ,
tryptophan synthase, α subunit (trpA) ,
tryptophanyl-tRNA synthetase (trpS) ,
trehalose-6-phosphate phosphatase (otsB) ,
trehalose-6-phosphate synthase (otsA) ,
cytoplasmic trehalase (treF) ,
trehalose-6-phosphate hydrolase (treC) ,
threonyl-tRNA synthetase (thrS) ,
threonine synthase (thrC) ,
thioredoxin reductase monomer (trxB) ,
guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase [multifunctional] (spoT) ,
serine acetyltransferase monomer (cysE) ,
SecB ,
SecA ,
succinate:quinone oxidoreductase, FAD binding protein (sdhA) ,
RNA polymerase, sigma S (sigma 38) factor (rpoS) ,
RNA polymerase, sigma 32 (sigma H) factor (rpoH) ,
RNA polymerase, sigma 24 (sigma E) factor (rpoE) ,
RNA polymerase, sigma 70 (sigma D) factor (rpoD) ,
RNA polymerase, β' subunit (rpoC) ,
RNA polymerase, β subunit (rpoB) ,
L-ribulose 5-phosphate 4-epimerase monomer (araD) ,
L-ribulokinase monomer (araB) ,
ribokinase (rbsK) ,
GDP pyrophosphokinase / GTP pyrophosphokinase (relA) ,
RcsB ,
NadA ,
Qor ,
pyrroline-5-carboxylate reductase monomer (proC) ,
fused PutA transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase ,
N5-carboxyaminoimidazole ribonucleotide synthetase monomer (purK) ,
SerC ,
phosphoserine phosphatase (serB) ,
NtrB (glnL) ,
indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (trpC) ,
exopolyphosphatase monomer (ppx) ,
Gpp ,
PhnL subunit of methylphosphonate degradation complex ,
phenylalanyl-tRNA synthetase β-chain (pheT) ,
phenylalanyl-tRNA synthetase α-chain (pheS) ,
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (gpmM) ,
SerA ,
predicted phosphatase (ytjC) ,
pyruvate formate-lyase activating enzyme (pflA) ,
Ppc ,
PdxA ,
Rob DNA-binding transcriptional activator ,
SoxR DNA-binding transcriptional dual regulator ,
IclR transcriptional repressor ,
MetJ transcriptional repressor ,
CytR ,
RbsR DNA-binding transcriptional dual regulator ,
CspA DNA-binding transcriptional activator ,
GntR DNA-binding transcriptional repressor ,
GlpR DNA-binding transcriptional repressor ,
TdcR DNA-binding transcriptional activator ,
ExuR DNA-binding transcriptional repressor ,
EbgR DNA-binding transcriptional repressor ,
FhlA transcriptional activator ,
positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression (rcsA) ,
SdiA DNA-binding transcriptional dual regulator ,
Mlc DNA-binding transcriptional repressor ,
FadR DNA-binding transcriptional dual regulator ,
NAD(P)H:quinone oxidoreductase (wrbA) ,
DeoR DNA-binding transcriptional repressor ,
MngR ,
AppY DNA-binding transcriptional activator ,
Cra DNA-binding transcriptional dual regulator ,
LeuO DNA-binding transcriptional dual regulator ,
FucR transcriptional activator ,
RNA polymerase, sigma 19 factor (fecI) ,
SoxS DNA-binding transcriptional dual regulator ,
MtlR DNA-binding transcriptional repressor ,
MarA DNA-binding transcriptional dual regulator ,
MarR transcriptional repressor ,
MalI DNA-binding transcriptional repressor ,
LysR DNA-binding transcriptional dual regulator ,
Lrp transcriptional dual regulator ,
integration host factor (IHF), β subunit (ihfB) ,
integration host factor (IHF), α subunit (ihfA) ,
GcvA DNA-binding transcriptional dual regulator ,
CynR DNA-binding transcriptional repressor ,
TdcA DNA-binding transcriptional activator ,
NagC DNA-binding transcriptional dual regulator ,
CRP transcriptional dual regulator ,
AsnC ,
AraC ,
MalT transcriptional activator ,
OxyR DNA-binding transcriptional dual regulator ,
MelR DNA-binding transcriptional dual regulator ,
LexA ,
IlvY DNA-binding transcriptional dual regulator ,
FNR ,
Fis ,
PyrE ,
OmpR ,
MetB ,
NrdF ,
NrdE ,
subunit of NADH dehydrogenase (quinone) ,
nitrite reductase, small subunit (nirD) ,
nitrite reductase, large subunit (nirB) ,
molybdenum cofactor assembly chaperone subunit (δ subunit) of nitrate reductase 1 (narJ) ,
signal peptide-binding chaperone for NapA (napD) ,
N-acetylmannosamine kinase (nanK) ,
predicted N-acetylmannosamine-6-phosphate epimerase (nanE) ,
GlmU ,
ArgA ,
FlhC ,
DNA polymerase III, γ subunit (dnaX) ,
methylglyoxal reductase [multifunctional] (dkgB) ,
methylglyoxal reductase [multifunctional] (dkgA) ,
GhrB ,
acetaldehyde dehydrogenase 2 (mhpF) ,
methylglyoxal synthase (mgsA) ,
mannose-6-phosphate isomerase (manA) ,
maltodextrin glucosidase (malZ) ,
Maa ,
malate synthase A (aceB) ,
CadA ,
LtaE ,
leucyl-tRNA synthetase (leuS) ,
LeuC ,
isocitrate lyase monomer (aceA) ,
hydrogenase 3, large subunit (hycE) ,
homoserine O-succinyltransferase (metA) ,
ThrB ,
cobalamin-independent homocysteine transmethylase (metE) ,
histidyl-tRNA synthetase (hisS) ,
coproporphyrinogen III dehydrogenase (hemN) ,
guanylate kinase (gmk) ,
Gst (gstA) ,
phosphoglycolate phosphatase (gph) ,
GuaC ,
glycyl-tRNA synthetase, α subunit (glyQ) ,
phosphoribosylamine-glycine ligase (purD) ,
glycerophosphodiester phosphodiesterase, cytosolic (ugpQ) ,
GlgP ,
glycogen synthase (glgA) ,
1,4-α-glucan branching enzyme (glgB) ,
glycerol-3-phosphate dehydrogenase (gpsA) ,
ProA ,
ProB ,
glutathione reductase (NADPH) (gor) ,
glutamyl-tRNA synthetase (gltX) ,
5-keto-D-gluconate 5-reductase (idnO) ,
glucokinase (glk) ,
GlgC ,
glucose 6-phosphate-1-dehydrogenase (zwf) ,
glutaminyl-tRNA synthetase (glnS) ,
[protein-PII] uridylyltransferase (glnD) ,
GDP-mannose 4,6-dehydratase (gmd) ,
phosphoribosylglycinamide formyltransferase 2 (purT) ,
phosphoribosylglycinamide formyltransferase 1 (purN) ,
galactose-1-phosphate uridylyltransferase (galT) ,
galactokinase (galK) ,
hydroxamate siderophore iron reductase (fhuF) ,
BglJ DNA-binding transcriptional regulator ,
enzyme with tRNA 2'-phosphotransferase activity (kptA) ,
IdnR transcriptional regulator ,
L-ascorbate 6-phosphate lactonase (ulaG) ,
ribosome small subunit-dependent GTPase A (rsgA) ,
AlsR DNA-binding transcriptional repressor (rpiR) ,
regulator of the Cpx response and possible chaperone involved in resistance to extracytoplasmic stress (cpxP) ,
predicted DNA-binding transcriptional regulator (dgoR) ,
RNA 3'-terminal phosphate cyclase (rtcA) ,
molecular chaperone Hsp33 (hslO) ,
heat shock protein Hsp15 involved in ribosome recycling (hslR) ,
MlaB ,
protein involved in stress response (yhbO) ,
cAMP phosphodiesterase (cpdA) ,
QseB transcriptional activator ,
SecY-interacting protein (syd) ,
4-diphosphocytidyl-2C-methyl-D-erythritol synthetase monomer (ispD) ,
HyfR DNA-binding transcriptional activator ,
UDP-L-Ara4O C-4" transaminase (arnB) ,
NADH-dependent dihydropyrimidine dehydrogenase subunit (preT) ,
lipid kinase (yegS) ,
protein-tyrosine phosphatase (wzb) ,
predicted uridylyltransferase subunit with GalU (galF) ,
Nac DNA-binding transcriptional dual regulator ,
Cbl DNA-binding transcriptional activator ,
Mlc titration factor (mtfA) ,
cadmium-induced cadmium binding protein (zinT) ,
predicted protein (dsrB) ,
predicted ferritin-like protein (ftnB) ,
copper homeostasis protein (cutC) ,
exonuclease X (exoX) ,
KdgR DNA-binding transcriptional repressor ,
conserved protein (yoaA) ,
SufB component of SufBCD Fe-S cluster scaffold complex ,
SufC component of SufBCD Fe-S cluster scaffold complex ,
SufD component of SufBCD Fe-S cluster scaffold complex ,
L-cysteine desulfurase (sufS) ,
sulfur acceptor for SufS cysteine desulfurase (sufE) ,
SlyA DNA-binding transcriptional activator ,
UidR DNA-binding transcriptional repressor ,
trans-aconitate 2-methyltransferase (tam) ,
ATP-dependent helicase (hrpA) ,
FeaR DNA-binding transcriptional activator ,
predicted DNA-binding transcriptional regulator, LYSR-type (abgR) ,
lipid hydroperoxide peroxidase (tpx) ,
4-aminobutyrate aminotransferase (puuE) ,
L,D-carboxypeptidase A (ldcA) ,
N-acetyl-D-glucosamine kinase (nagK) ,
β-N-acetylhexosaminidase (nagZ) ,
DNA damage-inducible protein I (dinI) ,
specificity factor for ClpA-ClpP chaperone-protease complex (clpS) ,
putative ATP-binding component of a transport system (ybiT) ,
endonuclease VIII (nei) ,
DpiA ,
CusR ,
endodeoxyribonuclease RUS (Holliday junction resolvase) (rusA) ,
Hyi ,
AllR DNA-binding transcriptional repressor ,
nucleoprotein/polynucleotide-associated enzyme (yaiL) ,
MhpR transcriptional activator ,
propionyl-CoA synthetase (prpE) ,
2-methylcitrate synthase (prpC) ,
2-methylisocitrate lyase (prpB) ,
DNA polymerase IV (Y-family DNA polymerase; translesion DNA synthesis) (dinB) ,
D-sedoheptulose 7-phosphate isomerase (lpcA) ,
modulator of Rho-dependent transcription termination (rof) ,
CaiF ,
fumarate reductase flavoprotein (frdA) ,
geranyl diphosphate synthase / farnesyl diphosphate synthase (ispA) ,
formyltetrahydrofolate deformylase (purU) ,
formate dehydrogenase H (fdhF) ,
phosphoribosylformylglycinamide synthetase (purL) ,
formate dehydrogenase-O, α subunit (fdoG) ,
Fcl ,
FabZ ,
FabH ,
fructose-1,6-bisphosphatase monomer (fbp) ,
Epd ,
EntE ,
EntB monomer ,
enoyl-[acyl-carrier-protein] reductase subunit (fabI) ,
ribosome modulation factor (rmf) ,
UxuR DNA-binding transcriptional repressor ,
RNA chaperone, involved in posttranscriptional control of ProP levels (proQ) ,
stationary phase mismatch/uracil DNA glycosylase (mug) ,
predicted DNA-binding transcriptional regulator (ybiH) ,
predicted cation transport protein (chaC) ,
predicted cation transport regulator (chaB) ,
RtcR DNA-binding transcriptional activator ,
PspF transcriptional dual regulator ,
ArsR ,
sulfur transfer protein (tusA) ,
23S rRNA m1G745 methyltransferase (rlmA) ,
TreR transcriptional repressor ,
chaperone protein for trimethylamine-N-oxide oxidoreductase I (torD) ,
CbpA monomer ,
transcription antiterminator and regulator of RNA stability (cspE) ,
copper binding protein CutA ,
Ca2+-binding protein involved in chromosome partitioning (mukF) ,
16S rRNA m5C967 methyltransferase (rsmB) ,
nucleoid-associated protein RdgC ,
chaperone for [Fe-S] cluster biosynthesis (hscA) ,
regulator of RpoS (rssB) ,
AcrR DNA-binding transcriptional repressor ,
peptide chain release factor RF3 (prfC) ,
protein chain elongation factor EF-P (efp) ,
23S rRNA pseudouridine synthase (rluD) ,
16S rRNA pseudouridine 516 synthase (rsuA) ,
ZntR transcriptional activator ,
LldR transcriptional repressor ,
Zur ,
DNA gyrase inhibitor (sbmC) ,
ATPase component of the HslVU protease (hslU) ,
serine/threonine protein kinase (rdoA) ,
molybdopterin-guanine dinucleotide biosynthesis adaptor protein (mobB) ,
lipoyl-protein ligase A (lplA) ,
putative zinc peptidase (pqqL) ,
EnvR DNA-binding transcriptional repressor ,
regulator of σ70D), stationary phase protein (rsd) ,
heme-containing peroxidase/deferrochelatase (efeB) ,
ATP-binding protein (phoH) ,
regulatory ATPase (ravA) ,
hibernation promoting factor (hpf) ,
MoaC monomer ,
transcription-repair coupling factor (mfd) ,
molybdopterin biosynthesis protein A (moaA) ,
transcription elongation factor GreB ,
H-NS-like DNA-binding protein with RNA chaperone activity (stpA) ,
hydrogenase maturation protein, carbamoyltransferase (hypF) ,
member of ATP-dependent helicase superfamily II (lhr) ,
NikR DNA-binding transcriptional repressor, Ni-binding ,
fructose 1,6-bisphosphatase II (glpX) ,
DNA polymerase III, θ subunit (holE) ,
DNA polymerase III, δ prime subunit (holB) ,
methyltransferase for 50S ribosomal subunit protein L11 (prmA) ,
ssDNA/RNA exonuclease, 3' → 5' specific (tatD) ,
HdfR DNA-binding transcriptional dual regulator ,
oligopeptidase A (prlC) ,
stationary phase nucleoid protein that sequesters iron and protects DNA from damage (dps) ,
DNA polymerase III, ψ subunit (holD) ,
DNA polymerase III, χ subunit (holC) ,
DNA polymerase III, δ subunit (holA) ,
universal stress global stress response regulator (uspA) ,
surface composition regulator (glgS) ,
Fe-S cluster assembly, scaffold protein (sufA) ,
ATP-dependent helicase (dinG) ,
RNA polymerase, sigma 28 (sigma F) factor (fliA) ,
tRNA-specific 2-thiouridylase (mnmA) ,
lipoate synthase monomer (lipA) ,
Qin prophage; small protein (ydfB) ,
ribonuclease G (RNAse G) monomer (rng) ,
manno(fructo)kinase (mak) ,
GlrR DNA-binding transcriptional activator ,
MutL ,
10-formyltetrahydrofolate:L-methionyl-tRNAfMet N-formyltransferase (fmt) ,
calcium-binding protein required for initiation of chromosome replication (gspB) ,
protein involved in chromosome partitioning (mukE) ,
predicted kinase inhibitor (ybhB) ,
3-methyl-adenine DNA glycosylase II, inducible (alkA) ,
DNA-damage-inducible protein (dinD) ,
bacterioferritin-associated ferredoxin (bfd) ,
30S ribosome binding factor (rbfA) ,
tRNA pseudouridine 55 synthase (truB) ,
GcvR predicted transcriptional regulator ,
XapR transcriptional activator ,
Qin prophage; toxin of the RelE-RelB toxin-antitoxin system and cofactor to enhance the repressor activity of RelB ,
23S rRNA pseudouridine synthase (rluC) ,
leucyl, phenylalanyl-tRNA-protein transferase (aat) ,
DNA replication inhibitor (cspD) ,
acetyl esterase (aes) ,
exonuclease VII, small subunit (xseB) ,
ATP-dependent dsDNA exonuclease (sbcD) ,
RNA polymerase holoenzyme assembly factor Crl ,
PdhR DNA-binding transcriptional dual regulator ,
16S rRNA m4C1402 methyltransferase (rsmH) ,
peptidyl-prolyl cis-trans isomerase (fkpB) ,
UvrD ,
excinuclease ABC, subunit C; repair of UV damage to DNA (uvrC) ,
excision nuclease subunit A (uvrA) ,
uracil-DNA glycosylase (ung) ,
SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC ,
DNA-binding protein; inhibition of replication at Ter sites (tus) ,
elongation factor Tu (tufB) ,
elongation factor Tu (tufA) ,
protein chain elongation factor EF-Ts (tsf) ,
tRNA m5U54 methyltransferase (trmA) ,
predicted protamine-like protein (tpr) ,
DNA topoisomerase III (topB) ,
DNA topoisomerase I (topA) ,
tRNA-guanine transglycosylase monomer (tgt) ,
inositol monophosphatase (suhB) ,
ssDNA-binding protein (ssb) ,
SrmB, DEAD-box RNA helicase ,
D-arabinose 5-phosphate isomerase (gutQ) ,
selenocysteyl-tRNA-specific translation elongation factor (selB) ,
selenocysteine synthase (selA) ,
ATP-dependent dsDNA exonuclease (sbcC) ,
Holliday junction nuclease; resolution of structures; repair (ruvC) ,
branch migration of Holliday structures; repair helicase (ruvB) ,
branch migration of Holliday structures; repair (ruvA) ,
RNA polymerase, ω subunit (rpoZ) ,
RNA polymerase, α subunit (rpoA) ,
RNAse HII, degrades RNA of DNA-RNA hybrids (rnhB) ,
RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication (rnhA) ,
RNase D (rnd) ,
ribosomal-protein-L12-serine acetyltransferase (rimL) ,
ribosomal-protein-S5-alanine N-acetyltransferase (rimJ) ,
RfaH transcriptional antiterminator ,
rep ,
recombination and repair (recR) ,
protein interacts with RecR and possibly RecF proteins (recO) ,
protein used in recombination and DNA repair (recN) ,
DNA strand exchange and recombination protein with protease and nuclease activity (recA) ,
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA) ,
peptidyl-tRNA hydrolase (pth) ,
primosomal replication protein N'' (priC) ,
PriB ,
primosome factor N' (priA) ,
peptide chain release factor RF2 (prfB) ,
peptide chain release factor RF1 (prfA) ,
peptidyl-prolyl cis-trans isomerase B (rotamase B) (ppiB) ,
DNA polymerase II (polB) ,
DNA polymerase I, 5' --> 3' polymerase, 5' --> 3' and 3' --> 5' exonuclease (polA) ,
protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD (pmbA) ,
deoxyribodipyrimidine photolyase (photoreactivation) (phr) ,
ribose 1,5-bisphosphokinase (phnN) ,
peptidase D (pepD) ,
aminopeptidase A/I (pepA) ,
poly(A) polymerase I (pcnB) ,
L-isoaspartate protein carboxylmethyltransferase type II (pcm) ,
topoisomerase IV subunit B (parE) ,
topoisomerase IV subunit A (parC) ,
transcription termination factor NusG ,
transcription antitermination protein NusB ,
endonuclease III; specific for apurinic and/or apyrimidinic sites (nth) ,
Nlp transcriptional regulator (sfsB) ,
adenine glycosylase; G.C --> T.A transversions (mutY) ,
8-oxo-dGTP diphosphatase (mutT) ,
MutS ,
MutH ,
MprA ,
cell division topological specificity factor and inhibitory component of the MinC-MinD-MinE system that regulates septum placement ,
cell division inhibitor of the MinC-MinD-MinE and DicB-MinC systems that regulate septum placement ,
tRNA(i6A37) synthase (miaA) ,
MrcC subunit of 5-methylcytosine restriction system (mcrC) ,
MrcB subunit of 5-methylcytosine restriction system (mcrB) ,
bifunctional β-cystathionase, PLP-dependent and regulator of maltose regulon (malY) ,
Lon ,
DNA ligase ,
16S rRNA m62A1518,m62A1519 dimethyltransferase (rsmA) ,
protein chain initiation factor IF-3 (infC) ,
protein chain initiation factor IF2 (infB) ,
protein chain initiation factor IF-1 (infA) ,
transcriptional dual regulator HU-β, NS1 (HU-1) (hupB) ,
transcriptional dual regulator HU-α (HU-2) (hupA) ,
specificity determinant for hsdM and hsdR (hsdS) ,
host restriction; endonuclease R (hsdR) ,
host modification; DNA methylase M (hsdM) ,
tRNA pseudouridine synthase I (truA) ,
serine/threonine kinase HipA ,
HipB ,
RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins (hfq) ,
DNA gyrase, subunit B (gyrB) ,
DNA gyrase, subunit A ,
nucleotide exchange factor GrpE ,
transcription elongation factor GreA ,
glycogen phosphorylase-limit dextrin α-1,6-glucohydrolase (glgX) ,
elongation factor G (fusA) ,
L-fucose mutarotase (fucU) ,
essential cell division protein FtsZ ,
ribosome recycling factor (frr) ,
formamidopyrimidine DNA glycosylase (mutM) ,
FlhD ,
regulator for fimA (fimE) ,
regulator for fimA (fimB) ,
enterochelin esterase (fes) ,
primosomal protein DnaT ,
DNA polymerase III, ε subunit (dnaQ) ,
chaperone protein DnaK ,
chaperone protein DnaJ ,
DNA primase (dnaG) ,
DnaB ,
DeaD, DEAD-box RNA helicase ,
DNA-cytosine methyltransferase (dcm) ,
ATP-dependent RNA helicase, specific for 23S rRNA (dbpA) ,
DNA adenine methyltransferase (dam) ,
ClpX ,
ClpA ,
molybdopterin-synthase adenylyltransferase (moeB) ,
molybdopterin molybdenumtransferase (moeA) ,
monoacetylchitobiose-6-phosphate hydrolase (chbF) ,
ChbR DNA-binding transcriptional dual regulator ,
fused tRNA nucleotidyltransferase / 2',3'-cyclic phosphodiesterase / 2' nucleotidase and phosphatase (cca) ,
BolA DNA-binding transcriptional dual regulator ,
biotin sulfoxide reductase (bisC) ,
BglG transcriptional antiterminator (monomer) ,
thiol peroxidase (bcp) ,
predicted anaerobic sulfatase maturation enzyme (aslB) ,
AscG DNA-binding transcriptional repressor ,
diadenosine tetraphosphatase (apaH) ,
AlkB repair system for alkylated DNA and RNA ,
Dfp ,
AceF ,
dTDP-glucose 4,6-dehydratase (rfbB) ,
dTDP-4-dehydrorhamnose 3,5-epimerase (rfbC) ,
D-serine ammonia-lyase (dsdA) ,
PyrC ,
DapF ,
UbiG ,
deoxyguanosine triphosphate triphosphohydrolase (dgt) ,
D-cysteine desulfhydrase (dcyD) ,
D-alanine-D-alanine ligase B (ddlB) ,
D-alanine-D-alanine ligase A (ddlA) ,
MetC ,
3-deoxy-D-manno-octulosonate cytidylyltransferase (kdsB) ,
coproporphyrinogen III oxidase (hemF) ,
cobinamide adenosyltransferase / cobalamin adenosyltransferase (btuR) ,
citrate lyase, citrate-ACP transferase α subunit (citF) ,
citrate lyase, citryl-ACP lyase β subunit (citE) ,
chorismate lyase (ubiC) ,
TyrA ,
PheA ,
CheZ ,
ArgI ,
ArgF ,
cyclopropane fatty acyl phospholipid synthase (cfa) ,
CaiB monomer ,
acetyl-CoA carboxyltransferase, α subunit (accA) ,
bifunctional biotin-[acetyl-CoA-carboxylase] ligase and transcriptional repressor (birA) ,
AccC ,
β-galactosidase monomer (lacZ) ,
ATP synthase F1 complex - delta subunit (atpH) ,
ATP synthase F1 complex - gamma subunit (atpG) ,
ATP synthase F1 complex - beta subunit (atpD) ,
ATP synthase F1 complex - epsilon subunit (atpC) ,
ATP synthase F1 complex - alpha subunit (atpA) ,
PanD proenzyme, π protein ,
aspartate carbamoyltransferase, PyrI subunit ,
aspartate carbamoyltransferase, PyrB subunit ,
AsnB ,
AsnA ,
adenylosuccinate lyase (purB) ,
shikimate kinase II (aroL) ,
ArgG ,
argininosuccinate lyase (argH) ,
L-arabinose isomerase monomer (araA) ,
anthranilate synthase component II (trpD) ,
AnsA ,
amylomaltase (malQ) ,
Amn ,
α-amylase (amyA) ,
galactose-1-epimerase (galM) ,
γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (puuC) ,
PurM ,
AICAR transformylase / IMP cyclohydrolase (purH) ,
PurA ,
adenylate cyclase (cyaA) ,
citrate lyase, acyl carrier γ subunit (citD) ,
ArgD ,
ArgE ,
acetylglutamate kinase monomer (argB) ,
6-phosphofructokinase-2 monomer (pfkB) ,
3-oxoacyl-[acyl-carrier-protein] reductase subunit (fabG) ,
LeuB ,
2-isopropylmalate synthase (leuA) ,
Zn2+ ABC transporter - ATP binding subunit (znuC) ,
galactofuranose / galactopyranose ABC transporter - putative ATP binding subunit (ytfR) ,
MlaF ,
YphE ,
YnjD ,
energy-dependent translational throttle protein (ettA) ,
D-allose ABC transporter - ATP binding subunit (alsA) ,
fused predicted transporter subunits of ABC superfamily: ATP-binding components (yheS) ,
peptide ABC transporter - ATP binding subunit (yejF) ,
YehX ,
YddP (ddpD) ,
YddO (ddpF) ,
YdcT ,
predicted sugar transporter subunit: ATP-binding component of ABC superfamily (ycjV) ,
aliphatic sulfonate ABC transporter - ATP binding subunit (ssuB) ,
YbhF ,
ABC transporter with a role in iron homeostasis - ATP-binding subunit (fetA) ,
YbbA ,
CP4-6 prophage; predicted ferric transporter subunit/ATP-binding component of ABC superfamily (afuC) ,
YadG ,
xylose ABC transporter - ATP binding subunit (xylG) ,
thiamin ABC transporter - ATP binding subunit (thiQ) ,
ribose ABC transporter - putative ATP binding subunit (rbsA) ,
phosphate ABC transporter - ATP binding subunit (pstB) ,
glycine betaine / proline ABC transporter - ATP binding subunit (proV) ,
putrescine ABC transporter - ATP binding subunit (potG) ,
putrescine / spermidine ABC transporter - ATP binding subunit (potA) ,
predicted carbon-phosphorous lyase subunit (phnK) ,
phosphonate ABC transporter - ATP binding subunit (phnC) ,
murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit (oppD) ,
nickel ABC transporter - ATP binding subunit (nikE) ,
nickel ABC transporter - ATP binding subunit (nikD) ,
galactose ABC transporter - ATP binding subunit (mglA) ,
glutamate / aspartate ABC transporter - ATP binding subunit (gltL) ,
glutamine ABC transporter - ATP binding subunit (glnQ) ,
ferric enterobactin ABC transporter - ATP binding subunit (fepC) ,
dipeptide ABC transporter - putative ABC binding subunit (dppF) ,
dipeptide ABC transporter - putative ATP binding subunit (dppD) ,
sulfate / thiosulfate ABC transporter - ATP binding subunit (cysA) ,
protoheme IX ABC transporter - ATP binding subunit (ccmA) ,
vitamin B12 ABC transporter - ATP binding subunit (btuD) ,
arabinose ABC transporter - ATP binding subunit (araG) ,
L-methionine / D-methionine ABC transporter - ATP binding subunit (metN) ,
citrate lyase [acyl carrier protein] component ,
pyruvate formate-lyase / 2-ketobutyrate formate-lyase ,
NtrC-Phosphorylated DNA-binding transcriptional dual regulator ,
NtrB sensory histidine kinase - phosphorylated ,
RstA-Phosphorylated DNA-binding transcriptional regulator ,
PhoP-Phosphorylated DNA-binding transcriptional dual regulator ,
PhoB-Phosphorylated DNA-binding transcriptional dual regulator ,
OmpR-Phosphorylated ,
OmpR-Phosphorylated DNA-binding transcriptional dual regulator ,
NarP-Phosphorylated DNA-binding transcriptional dual regulator ,
NarL-Phosphorylated DNA-binding transcriptional dual regulator ,
ZraR-Phosphorylated DNA-binding transcriptional activator ,
EvgA-Phosphorylated DNA-binding transcriptional activator ,
DpiA-Pasp DNA-binding transcriptional dual regulator ,
CreB-Phosphorylated DNA-binding transcriptional regulator ,
CheY-Pasp ,
CheB-Pasp ,
BasR-Phosphorylated transcriptional regulator ,
BaeR-Phosphorylated DNA-binding transcriptional activator ,
AtoC-phosphorylated DNA-binding transcriptional activator ,
ArcA-Phosphorylated DNA-binding transcriptional dual regulator ,
CheA(L) sensory histidine kinase - phosphorylated ,
CusR-Pasp DNA binding transcriptional activator ,
GlrR-Pasp56 DNA binding transcriptional activator ,
QseB-Phosphorylated DNA-binding transcriptional activator ,
flavodoxin 2 (fldB) ,
conserved protein (yqiK) ,
cell division protein; predicted checkpoint GTPase (yihA) ,
protein involved in threonylcarbamoyladenosine biosynthesis (tsaD) ,
predicted transcriptional regulator (ygeH) ,
CP4-57 prophage; predicted GTP-binding protein (yfjP) ,
NAD kinase monomer (nadK) ,
50S ribosomal subunit stability factor (der) ,
methionine sulfoxide reductase B (msrB) ,
tRNAIle-lysidine synthetase (tilS) ,
GTPase, involved in modification of U34 in tRNA (mnmE) ,
RecG DNA helicase ,
UMP kinase (pyrH) ,
transcription termination/antitermination L factor (nusA) ,
methionine sulfoxide reductase A (msrA) ,
methionine aminopeptidase (map) ,
GTP-binding protein (era) ,
Dxs ,
adenylate kinase (adk) ,
ModE ,
TorR ,
SOS mutagenesis and repair (umuC) ,
LpxB ,
DNA helicase IV (helD) ,
NtrC transcriptional dual regulator (glnG) ,
carbonic anhydrase monomer (cynT) ,
hypoxanthine-guanine phosphoribosyltransferase (hpt) ,
phosphoglucomutase (pgm) ,
phosphoglucosamine mutase (glmM) ,
phosphomannomutase (cpsG) ,
adenosine deaminase (add) ,
cysteinyl-tRNA synthetase (cysS) ,
reduced glutaredoxin 2 (grxB) ,
α-galactosidase monomer (melA) ,
elongation factor 4 (lepA) ,
SRP receptor (ftsY) ,
flagellar biosynthesis protein FliS ,
flagellar biosynthesis protein FliT ,
chaperone protein Tig; trigger factor ,
FadD ,
GroEL-GroES chaperonin complex ,
GTPase involved in chromosome partitioning and ribosome assembly (obgE) ,
ADP- sugar pyrophosphatase (nudF) ,
Upp ,
deoxyribose-phosphate aldolase (deoC) ,
ClpP ,
4-hydroxy-tetrahydrodipicolinate synthase (dapA) ,
NfsB monomer ,
adenine phosphoribosyltransferase (apt) ,
CodA ,
E3 monomer (lpd) ,
glycine decarboxylase (gcvP) ,
glutamate decarboxylase B subunit (gadB) ,
AspC ,
PyrG ,
GlnA ,
GlmS ,
UTP--glucose-1-phosphate uridylyltransferase (galU) ,
fumarase A monomer ,
aspartyl-tRNA synthetase (aspS) ,
fructose bisphosphate aldolase monomer (fbaB) ,
fumarase B monomer (fumB) ,
PepP ,
Ppa ,
purine nucleoside phosphorylase (deoD) ,
peptidase component of the HslVU protease ,
Ppk ,
pyruvate oxidase monomer (poxB) ,
ribose-5-phosphate isomerase A (rpiA) ,
LacI DNA-binding transcriptional repressor ,
predicted hydrolase monomer (ycaC) ,
FucI ,
PurF ,
3,4-dihydroxy-2-butanone 4-phosphate synthase (ribB) ,
SpeE ,
ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD) ,
RfbA ,
AnsB ,
UDP-glucose 4-epimerase monomer (galE) ,
dihydroxyacetone kinase subunit K (dhaK) ,
alkyl hydroperoxide reductase, AhpC component ,
Pgi ,
tyrosyl-tRNA synthetase (tyrS) ,
methionine adenosyltransferase (metK) ,
7-α-hydroxysteroid dehydrogenase (hdhA) ,
polynucleotide phosphorylase monomer (pnp) ,
FrmA ,
3-deoxy-D-manno-octulosonate 8-phosphate synthase (kdsA) ,
citrate synthase monomer (gltA) ,
Adi (adiA) ,
carbamoyl phosphate synthetase, α chain (carA) ,
ferritin iron storage protein (ftnA) ,
MaeB ,
subunit of E1p component of pyruvate dehydrogenase complex (aceE) ,
Eda ,
GlpK ,
O-acetylserine sulfhydrylase A (cysK) ,
malate dehydrogenase (mdh) ,
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (fklB) ,
pantothenate synthetase monomer (panC) ,
glycyl-tRNA synthetase, β subunit (glyS) ,
carbonic anhydrase 2 monomer (can) ,
SodB ,
bacterioferritin monomer (bfr) ,
pyruvate kinase I monomer (pykF) ,
porphobilinogen synthase (hemB) ,
PdxJ ,
pyruvate kinase II monomer (pykA) ,
periplasmic chaperone (skp) ,
Tdh ,
GMP synthetase (guaA) ,
FabF ,
3-methyl-2-oxobutanoate hydroxymethyltransferase monomer (panB) ,
serine hydroxymethyltransferase (glyA) ,
catalase II (katE) ,
glyoxalase III, Hsp31 molecular chaperone (hchA) ,
GuaB ,
methionyl-tRNA synthetase (metG) ,
AdhE ,
seryl-tRNA synthetase (serS) ,
lysyl-tRNA synthetase (lysU) ,
tryptophanase (tnaA) ,
triose phosphate isomerase monomer (tpiA) ,
PtsI ,
subunit of E1(0) component of 2-oxoglutarate dehydrogenase (sucA) ,
Eno ,
GroES cochaperonin (groS) ,
lysyl tRNA synthetase (LysRSs), constitutive (lysS) ,
Cdd ,
GroEL chaperonin (groL) ,
DnaN ,
prolyl-tRNA synthetase (proS) ,
acetate kinase (ackA) ,
Enzyme IIAGlc; Crr ,
acetyl-CoA carboxyltransferase, β subunit (accD) ,
aminopeptidase B (pepB) ,
glutathione synthetase monomer (gshB) ,
secretion monitor that regulates SecA translation (General Secretory Pathway) (secM) ,
ribonucleoside diphosphate reductase 1, β subunit, ferritin-like (nrdB) ,
HtpG monomer ,
Gpt ,
glutamate decarboxylase A subunit (gadA) ,
ClpB chaperone ,
PurC ,
hydroperoxidase I (katG) ,
PurE ,
predicted 5-keto 4-deoxyuronate isomerase monomer (kduI) ,
AhpF component ,
4-hydroxy-tetrahydrodipicolinate reductase (dapB) ,
FabB ,
AspA ,
Udp ,
glyceraldehyde 3-phosphate dehydrogenase-A monomer (gapA) ,
Dut ,
IlvC ,
frataxin, iron-binding and oxidizing protein (cyaY)

Unification Links: GO:0005829


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Mon Dec 22, 2014, biocyc13.