Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0006400 - tRNA modification

Synonyms: GO:0016549

Definition: The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.

Summary:
The term 'RNA editing' (GO:0016547) was merged into 'RNA modification' (GO:0009451) on the basis of statements in the preface of Modification and Editing of RNA (ISBN:1555811337) that there is no clear distinction between modification and editing. Parallel changes were made for substrate (e.g. tRNA, rRNA, etc.) specific child terms of 'RNA editing'.

Parent Classes:
GO:0008033 - tRNA processing ,
GO:0009451 - RNA modification

Child Classes:
GO:0002097 - tRNA wobble base modification (17) ,
GO:0002943 - tRNA dihydrouridine synthesis (3) ,
GO:0008616 - queuosine biosynthetic process (8) ,
GO:0019988 - charged-tRNA amino acid modification (1) ,
GO:0030488 - tRNA methylation (15) ,
GO:0031119 - tRNA pseudouridine synthesis (6) ,
GO:0034227 - tRNA thio-modification (7) ,
GO:0035600 - tRNA methylthiolation (1) ,
GO:0051391 - tRNA acetylation (1) ,
GO:0061504 - cyclic threonylcarbamoyladenosine biosynthetic process (1) ,
GO:0070329 - tRNA seleno-modification (2) ,
GO:0070526 - threonylcarbamoyladenosine biosynthetic process (4)

Term Members:
glutamyl-Q tRNAAsp synthetase (gluQ) ,
tRNA-specific 2-thiouridylase (mnmA) ,
GTPase, involved in modification of U34 in tRNA (mnmE) ,
tRNA m1G37 methyltransferase (trmD) ,
carboxy-S-adenosyl-L-methionine synthase (cmoA) ,
isopentenyl-adenosine A37 tRNA methylthiolase (miaB) ,
tRNA m7G46 methyltransferase (trmI) ,
tRNAIle-lysidine synthetase (tilS) ,
tRNA(i6A37) synthase (miaA) ,
tRNA C32 thiolase (ttcA)

Unification Links: GO:0006400


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Sat Dec 20, 2014, BIOCYC14A.