Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0008152 - metabolic process

Synonyms: metabolism

Definition: The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Summary:
Note that metabolic processes do not include single functions or processes such as protein-protein interactions, protein-nucleic acids, nor receptor-ligand interactions.

Parent Classes:
GO:0008150 - biological_process

Child Classes:
GO:0006807 - nitrogen compound metabolic process (1495) ,
GO:0009056 - catabolic process (600) ,
GO:0009058 - biosynthetic process (1185) ,
GO:0032259 - methylation (69) ,
GO:0044237 - cellular metabolic process (2253) ,
GO:0044238 - primary metabolic process (2016) ,
GO:0044710 - single-organism metabolic process (1660) ,
GO:0071704 - organic substance metabolic process (2238)

Parts:
GO:0019222 - regulation of metabolic process (597)

Term Members:
predicted hydrolase (yghX_2) ,
ADP- sugar pyrophosphatase (nudF) ,
predicted hydrolase (yghX_1) ,
Cu+ efflux ATPase (copA) ,
taurine ABC transporter - ATP binding subunit (tauB) ,
conserved protein (ygbM) ,
conserved protein (ygiQ) ,
predicted chlorohydrolase/aminohydrolase (ssnA) ,
predicted protein (ygeQ) ,
molybdopterin synthase sulfurtransferase (ynjE) ,
Maa ,
predicted PTS permease - FryC subunit ,
predicted deaminase with metallo-dependent hydrolase domain (yahJ) ,
conserved inner membrane protein (ylaB) ,
cyclic di-GMP phosphodiesterase (gmr) ,
diguanylate cyclase (ydaM) ,
CPS-53 (KpLE1) prophage; bactoprenyl glucosyl transferase (yfdH) ,
ABC transporter with a role in iron homeostasis - ATP-binding subunit (fetA) ,
predicted multidrug transporter subunit of ABC superfamily: ATP-binding component (mdlA) ,
AI-2 ABC transporter - ATP binding subunit (lsrA) ,
cyclic di-GMP phosphodiesterase (yfgF) ,
esterase (ypfH) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (ypeA) ,
protein with low undecaprenyl pyrophosphate phosphatase activity (lpxT) ,
predicted hydrolase (yegU) ,
predicted protein (yegK) ,
predicted acyltransferase (yedL) ,
predicted phosphodiesterase (yoaD) ,
diguanylate cyclase (yeaP) ,
predicted diguanylate cyclase (yeaJ) ,
predicted class I aldolase (lsrF) ,
predicted enzyme (yncG) ,
L-amino acid N-acyltransferase (mnaT) ,
predicted enzyme (ydcK) ,
predicted CDP-diglyceride synthase (ynbB) ,
conserved protein with endonuclease activity (smrA) ,
LolD ,
putative transport protein (ycfT) ,
diguanylate cyclase (ycdT) ,
poly-β-1,6-N-acetyl-D-glucosamine synthase - PgaC subunit ,
predicted metal-binding enzyme (ycbL) ,
MacAB-TolC macrolide efflux transport system - membrane subunit (macB) ,
predicted c-di-GMP-specific phosphodiesterase (yliE) ,
glutathione ABC transporter - ATP binding subunit (gsiA) ,
esterase (ybfF) ,
S-ureidoglycine aminohydrolase (allE) ,
predicted protein (yaiF) ,
predicted acyl transferase (pseudogene) (yaiX) ,
CP4-6 prophage; predicted protein (ykfF) ,
conserved protein (yaiS) ,
putrescine / spermidine ABC transporter - ATP binding subunit (potA) ,
chitobiose PTS permease - ChbA subunit ,
maltose ABC transporter - ATP binding subunit (malK) ,
phosphodiesterase (yfcE) ,
predicted Nudix hydrolase (yfcD) ,
cell division factor ZapE with ATPase activity ,
predicted protein (yrbL) ,
translation-dependent mRNA interferase, toxin of the HigB-HigA toxin-antitoxin system ,
Autoinducer 2-degrading protein (lsrG) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (yhbS) ,
MlaF ,
carbonic anhydrase 2 monomer (can) ,
ATP-binding lipopolysaccharide transport protein (msbA) ,
predicted hydrolase (ysgA) ,
protein-tyrosine-phosphatase / phosphoprotein phosphatase (pphB) ,
protein phosphatase 1 modulates phosphoproteins, signals protein misfolding (pphA) ,
flagellar biosynthesis protein FliJ ,
pyrimidine deoxynucleoside triphosphate pyrophosphohydrolase (nudI) ,
predicted acetyltransferase (yhhY) ,
predicted diguanylate cyclase (yfiN) ,
outer membrane lipoprotein (ybhC) ,
ADP-sugar pyrophosphorylase (nudE) ,
predicted hydrolase (yheT) ,
protein involved in stress response (yhbO) ,
KpLE2 phage-like element; predicted acetyltransferase (yjhQ) ,
predicted acetyltransferase (yjgM) ,
esterase (yjfP) ,
ribosome small subunit-dependent GTPase A (rsgA) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (yjdJ) ,
predicted diguanylate cyclase (yegE) ,
protein involved in CRISPR R-loop formation and dissociation (cas3) ,
EnvC divisome associated factor, activator of peptidoglycan hydrolases ,
O-acetyltransferase (wecH) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (yiaC) ,
c-di-GMP phosphodiesterase (yhjH) ,
zinc, cadmium and lead efflux system (zntA) ,
xylose ABC transporter - ATP binding subunit (xylG) ,
GDP-mannose hydrolase (nudK) ,
phosphodiesterase (yaeI) ,
predicted ATP-dependent helicase (hrpB) ,
CP4-6 prophage; predicted ferric transporter subunit/ATP-binding component of ABC superfamily (afuC) ,
protoheme IX ABC transporter - ATP binding subunit (ccmA) ,
ChpB toxin of the ChpB-ChpS toxin-antitoxin system ,
nickel ABC transporter - ATP binding subunit (nikE) ,
nickel ABC transporter - ATP binding subunit (nikD) ,
YehX ,
predicted synthetase/amidase with ATPase activity (yjfC) ,
D-allose ABC transporter - ATP binding subunit (alsA) ,
alkyl sulfatase (yjcS) ,
predicted c-di-GMP-specific phosphodiesterase (yjcC) ,
NADH pyrophosphatase (nudC) ,
protein involved in base analog detoxification (yiiM) ,
thiamin ABC transporter - ATP binding subunit (thiQ) ,
regulatory ATPase (ravA) ,
3-mercaptopyruvate:cyanide sulfurtransferase [multifunctional] (sseA) ,
diguanylate cyclase (dgcZ) ,
flagellar biosynthesis protein FliH ,
inorganic triphosphatase (ygiF) ,
glutamine synthetase adenylyltransferase / glutamine synthetase deadenylase (glnE) ,
L-methionine / D-methionine ABC transporter - ATP binding subunit (metN) ,
member of ATP-dependent helicase superfamily II (lhr) ,
GTPase that interacts with methylmalonyl-CoA mutase (argK) ,
ATP-dependent RNA helicase (rhlE) ,
flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein ,
nucleoside triphosphate pyrophosphatase (yhdE) ,
thiosulfate sulfurtransferase (pspE) ,
ATP-dependent RNA helicase, specific for 23S rRNA (dbpA) ,
phosphodiesterase, c-di-GMP-specific (yahA) ,
stationary-phase protein with possible role in p-aminobenzoate or folate biosynthesis (fic) ,
phosphonate ABC transporter - ATP binding subunit (phnC) ,
sulfate / thiosulfate ABC transporter - ATP binding subunit (cysA) ,
flagellar motor switch protein FliN ,
exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific (recE) ,
UDP-glucuronate:LPS(HepIII) glycosyltransferase (waaH) ,
glycerol-3-phosphate ABC transporter - ATP binding subunit (ugpC) ,
serine/threonine protein kinase (rdoA) ,
nucleoside triphosphate pyrophosphohydrolase (mazG) ,
cAMP phosphodiesterase (cpdA) ,
nucleoside di- and triphosphate hydrolase [multifunctional] (nudJ) ,
predicted acyltransferase with acyl-CoA N-acyltransferase domain (elaA) ,
AphA monomer ,
predicted Fe-S oxidoreductase (yhcC) ,
predicted enzyme with ATPase activity (ygiC) ,
predicted acetyltransferase (yiiD) ,
glutathione S-transferase B (gstB) ,
L-tartrate dehydratase, β subunit (ttdB) ,
5-formyltetrahydrofolate cyclo-ligase (fau) ,
flagellar motor switch protein FliG ,
Mg2+ / Ni2+ transporting ATPase (mgtA) ,
acylphosphatase (yccX) ,
conserved protein (ycbJ) ,
conserved protein (ybhH) ,
predicted diguanylate cyclase (adrA) ,
aliphatic sulfonate ABC transporter - ATP binding subunit (ssuB) ,
phosphate ABC transporter - ATP binding subunit (pstB) ,
galactose ABC transporter - ATP binding subunit (mglA) ,
predicted multidrug transporter subunit of ABC superfamily: ATP-binding component (mdlB) ,
L-arginine ABC transporter - ATP binding subunit (artP) ,
arabinose ABC transporter - ATP binding subunit (araG) ,
Zn2+ ABC transporter - ATP binding subunit (znuC) ,
LptB ,
CheZ ,
SpeG ,
esterase (yqiA) ,
acyl-CoA thioesterase (yciA) ,
flagellar basal-body protein FliE ,
m7GTP pyrophosphatase (yceF) ,
flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein ,
molybdate ABC transporter - ATP binding subunit (modC) ,
predicted acetyltransferase (yjaB) ,
iron (III) hydroxamate ABC transporter - ATP binding subunit (fhuC) ,
CheB ,
flagellar motor switch protein FliM ,
vitamin B12 ABC transporter - ATP binding subunit (btuD) ,
L-tartrate dehydratase, α subunit (ttdA) ,
ribose ABC transporter - putative ATP binding subunit (rbsA) ,
fermentation/respiration switch protein (frsA) ,
K+ transporting ATPase - KdpC subunit ,
K+ transporting ATPase - ATP binding subunit (kdpB) ,
K+ transporting ATPase - K+ channel forming subunit (kdpA) ,
o-succinylbenzoate synthase (menC) ,
lipid kinase (yegS) ,
P-loop guanosine triphosphatase (yjiA) ,
guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase [multifunctional] (spoT) ,
IlvM ,
GlpK ,
TyrR DNA-binding transcriptional dual regulator ,
anthranilate synthase component I (trpE) ,
IlvH ,
D-galactonate dehydratase (dgoD) ,
2-oxo-3-deoxygalactonate 6-phosphate aldolase (dgoA) ,
cysteine sulfinate desulfinase (csdA) ,
γ-aminobutyraldehyde dehydrogenase (patD) ,
2-methylisocitrate lyase (prpB) ,
Dxs ,
fructose-1-phosphatase (yqaB) ,
predicted ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) (paaG) ,
oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (paaZ) ,
L-cysteine desulfurase (sufS) ,
allantoate amidohydrolase monomer (allC) ,
fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4''-decarboxylase (arnA) ,
3-(3-hydroxyphenyl)propionate 2-hydroxylase (mhpA) ,
p-aminobenzoyl-glutamate hydrolase subunit A (abgA) ,
2-deoxyglucose-6-phosphatase (yniC) ,
fused 5-methylaminomethyl-2-thiouridine-forming methyltransferase and FAD-dependent demodification enzyme (mnmC) ,
FadI monomer ,
predicted 2,3-dehydroadipyl-CoA hydratase (paaF) ,
β-N-acetylhexosaminidase (nagZ) ,
cardiolipin synthase 3 (clsC) ,
peroxyureidoacrylate / ureidoacrylate amido hydrolase (rutB) ,
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase (ybjI) ,
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase (ubiF) ,
FadD ,
flavoprotein (electron transport), possibly involved in anaerobic carnitine metabolism (fixC) ,
16S rRNA 2'-O-ribose C1402 methyltransferase (rsmI) ,
purine nucleotidase (yrfG) ,
cytoplasmic trehalase (treF) ,
imidazole glycerol phosphate synthase, HisF subunit ,
D-lactate dehydrogenase - fermentative (ldhA) ,
endonuclease VIII (nei) ,
pyridoxal phosphatase / HMP-PP hydrolase (cof) ,
ribonucleoside hydrolase 1 (pyrimidine-specific) (rihA) ,
3-hydroxy acid dehydrogenase monomer (ydfG) ,
NrdE ,
3-keto-L-gulonate 6-phosphate decarboxylase (ulaD) ,
D-mannonate oxidoreductase (uxuB) ,
short chain acyl-CoA synthetase (fadK) ,
ADP-heptose:LPS heptosyltransferase II (waaF) ,
GhrB ,
phosphoethanolamine transferase EptB ,
MenE ,
formyltetrahydrofolate deformylase (purU) ,
bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase (acnB) ,
transketolase II (tktB) ,
AidB ,
ribonucleoside hydrolase 2 (pyrimidine-specific) (rihB) ,
allulose-6-phosphate 3-epimerase (alsE) ,
phosphoglycolate phosphatase (gph) ,
trehalose-6-phosphate phosphatase (otsB) ,
crotonobetainyl-CoA hydratase (caiD) ,
6-phosphogluconate phosphatase (yieH) ,
LeuD ,
peptidase T ,
trehalose-6-phosphate hydrolase (treC) ,
ribonucleoside-triphosphate reductase (nrdD) ,
phosphosugar phosphatase (yigL) ,
acetyl-CoA synthetase (AMP-forming) (acs) ,
transketolase I (tktA) ,
[protein-PII] uridylyltransferase (glnD) ,
lipopolysaccharide core heptosyl transferase III (waaQ) ,
α-amylase (malS) ,
fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (ribD) ,
2-octaprenyl-6-methoxyphenol hydroxylase (ubiH) ,
GabD ,
aconitate hydratase 1 (acnA) ,
AccC ,
ADP-heptose:LPS heptosyltransferase I (waaC) ,
ArgE ,
acetyl esterase (aes) ,
SerC ,
ribonucleoside hydrolase 3 (rihC) ,
phosphoenolpyruvate carboxykinase (ATP) (pck) ,
AsnB ,
pyridoxal phosphatase / fructose 1,6-bisphosphatase (ybhA) ,
maltodextrin glucosidase (malZ) ,
sulfate adenylyltransferase, CysD subunit ,
adenine glycosylase; G.C --> T.A transversions (mutY) ,
monoacetylchitobiose-6-phosphate hydrolase (chbF) ,
GlmS ,
EntA ,
periplasmic trehalase (treA) ,
malonyl-[acp] methyltransferase (bioC) ,
8-amino-7-oxononanoate synthase monomer (bioF) ,
apo-serine activating enzyme (entF) ,
EntE ,
N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (hisA) ,
2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase (hcaB) ,
β-ketoadipyl-CoA thiolase (paaJ) ,
TdcB ,
GDP pyrophosphokinase / GTP pyrophosphokinase (relA) ,
PurF ,
ribulose-5-phosphate 3-epimerase (rpe) ,
dihydromonapterin reductase / dihydrofolate reductase (folM) ,
SucB ,
D-glucarate dehydratase (gudD) ,
3-oxoacyl-[acyl-carrier-protein] reductase subunit (fabG) ,
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase (yigB) ,
acetohydroxy acid synthase I, small subunit (ilvN) ,
cell shape; peptidoglycan synthetase; penicillin-binding protein 2 (mrdA) ,
GlmU ,
porphobilinogen synthase (hemB) ,
MenB ,
Dfp ,
O-acetylserine sulfhydrylase A (cysK) ,
IlvE ,
cardiolipin synthase 2 (clsB) ,
SerA ,
AdhE ,
5-keto-D-gluconate 5-reductase (idnO) ,
Pta ,
PheA ,
GcvR predicted transcriptional regulator ,
stationary phase mismatch/uracil DNA glycosylase (mug) ,
fructose-1,6-bisphosphatase monomer (fbp) ,
AnsA ,
sugar phosphatase (yidA) ,
pyrimidine nucleotidase (yjjG) ,
tryptophan synthase, α subunit (trpA) ,
triose phosphate isomerase monomer (tpiA) ,
succinyl-CoA synthetase, β subunit ,
adenosylmethionine decarboxylase, proenzyme (speD) ,
NAD kinase monomer (nadK) ,
glycerol-3-phosphate acyltransferase (plsB) ,
6-phosphofructokinase-1 monomer (pfkA) ,
predicted N-acetylmannosamine-6-phosphate epimerase (nanE) ,
glucosamine-6-phosphate deaminase (nagB) ,
3-deoxy-D-manno-octulosonate 8-phosphate synthase (kdsA) ,
GlgC ,
GTP cyclohydrolase I monomer (folE) ,
galactokinase (galK) ,
N-acetylneuraminate lyase (nanA) ,
4-hydroxy-tetrahydrodipicolinate synthase (dapA) ,
pantothenate kinase monomer (coaA) ,
cardiolipin synthase 1 (clsA) ,
cysteine desulfurase monomer (iscS) ,
LeuC ,
glutamate synthase, large subunit (gltB) ,
fused PutA transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase ,
PflB ,
LysC ,
2'3' cyclic nucleotide phosphodiesterase/3' nucleotidase (cpdB) ,
PyrF ,
L-arabinose isomerase monomer (araA) ,
bifunctional folylpolyglutamate synthetase / dihydrofolate synthetase (folC) ,
TyrA ,
ProA ,
HisD ,
HisB ,
HisC ,
fused tRNA nucleotidyltransferase / 2',3'-cyclic phosphodiesterase / 2' nucleotidase and phosphatase (cca) ,
AceF ,
α-galactosidase monomer (melA) ,
Ada DNA-binding transcriptional dual regulator ,
β-D-glucuronidase (uidA) ,
IlvD ,
formamidopyrimidine DNA glycosylase (mutM) ,
erythronate-4-phosphate dehydrogenase (pdxB) ,
IlvA ,
MrcB ,
peptidoglycan synthetase; penicillin-binding protein 1A (mrcA) ,
carbamoyl phosphate synthetase, β chain ,
indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (trpC) ,
anthranilate synthase component II (trpD) ,
β-galactosidase monomer (lacZ) ,
PhoA ,
MetL ,
ThrA ,
maltodextrin phosphorylase monomer (malP) ,
ribonucleoside diphosphate reductase 1, α subunit (nrdA) ,
phenylacetate-CoA ligase (paaK) ,
glycoside hydrolase (ygjK) ,
predicted protein, C-terminal fragment (yeeL_2) ,
KpLE2 phage-like element; predicted protein, N-ter fragment (yjgX_1) ,
bifunctional riboflavin kinase / FMN adenylyltransferase (ribF) ,
predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain (fdrA) ,
acyl-CoA dehydrogenase (fadE) ,
predicted acyltransferase (yqeF) ,
predicted 5-keto 4-deoxyuronate isomerase monomer (kduI) ,
glucarate dehydratase-related protein (gudX) ,
predicted oxidoreductase with FAD/NAD(P)-binding domain (ygcN) ,
sugar phosphatase (yfbT) ,
MhpD ,
CP4-6 prophage; D-xylonate dehydratase (yagF) ,
arylamine N-acetyltransferase (nhoA) ,
propionyl-CoA synthetase (prpE) ,
β-phosphoglucomutase (ycjU) ,
predicted oxidoreductase with FAD/NAD(P)-binding domain (ydiS) ,
putative sulfatase (ydeN) ,
predicted mannonate dehydrogenase (ydfI) ,
phosphate acetyltransferase monomer (eutD) ,
conserved protein (ybdN) ,
L-rhamnonate dehydratase (yfaW) ,
predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain (yahF) ,
predicted deoxygluconate dehydrogenase (ygcW) ,
acetyl-CoA:oxalate CoA-transferase (yfdE) ,
AtoB ,
acetyl-CoA:acetoacetyl-CoA transferase, β subunit (atoA) ,
acetyl-CoA:acetoacetyl-CoA transferase, α subunit (atoD) ,
predicted protein, N-terminal fragment (yeeL_1) ,
predicted phosphatase (yedP) ,
aldehyde dehydrogenase (astD) ,
succinylglutamate desuccinylase (astE) ,
predicted isomerase/hydrolase (ycgM) ,
predicted pyruvate formate lyase (ybiW) ,
sugar phosphatase (ybiV) ,
phosphoethanolamine transferase (opgE) ,
predicted hydratase (ybhJ) ,
CP4-6 prophage; probable 2-keto-3-deoxygluconate aldolase (yagE) ,
formyl-CoA transferase monomer (frc) ,
stress-induced alternate pyruvate formate-lyase subunit (grcA) ,
predicted peptidase (ygeY) ,
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase monomer (gpmA) ,
crotonobetainyl-CoA reductase (caiA) ,
pyruvate:flavodoxin oxidoreductase (ydbK) ,
predicted adenosylcobalamin phosphatase/α-ribazole phosphatase (cobC) ,
methylmalonyl-CoA decarboxylase (scpB) ,
predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain (ygfF) ,
L-Ala-D/L-Glu epimerase (ycjG) ,
predicted mutase (yhfW) ,
predicted hydrolase, inner membrane (yhbX) ,
2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive (tdcE) ,
predicted esterase (yjjU) ,
phosphoglycerol transferase I (opgB) ,
KpLE2 phage-like element; predicted frameshift suppressor (yjhR) ,
KpLE2 phage-like element; predicted nucleoside triphosphatase (sgcQ) ,
KpLE2 phage-like element; predicted epimerase (sgcE) ,
KpLE2 phage-like element; 2-dehydro-3-deoxy-D-pentonate aldolase (yjhH) ,
KpLE2 phage-like element; D-xylonate dehydratase (yjhG) ,
KpLE2 phage-like element; predicted protein (yjgX_2) ,
c-di-GMP binding protein involved in biofilm dispersal (bdcA) ,
mannonate/altronate dehydratase (rspA) ,
predicted 2-keto-3-deoxy-D-gluconate dehydrogenase (kduD) ,
fused predicted acetyl-CoA:acetoacetyl-CoA transferase: α subunit/β subunit (ydiF) ,
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (gpmM) ,
3-keto-L-gulonate 6-phosphate decarboxylase (sgbH) ,
2,3-diketo-L-gulonate reductase monomer (yiaK) ,
predicted oxidoreductase (ucpA) ,
NADH:ubiquinone oxidoreductase, chain CD (nuoC) ,
predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain (yohF) ,
predicted dehydrogenase, NAD-dependent (yeiQ) ,
formate acetyltransferase 2 (pflD) ,
predicted endonuclease (yihG) ,
predicted oxidoreductase (yciK) ,
carnitine-CoA ligase (caiC) ,
putative sulfatase (yidJ) ,
2-acylglycerophosphoethanolamine acyltransferase / acyl-ACP synthetase (aas) ,
phosphoethanolamine transferase EptA ,
predicted transferase/phosphorylase (ybiB) ,
pabC ,
ScpA ,
lipopolysaccharide core biosynthesis; heptosyl transferase IV; probably hexose transferase (waaU) ,
1-acylglycerol-3-phosphate O-acyltransferase (plsC) ,
arylsulfatase (aslA) ,
2-octaprenylphenol hydroxylase (ubiI) ,
PssA ,
glutamate racemase (murI) ,
nicotinamidase / pyrazinamidase (pncA) ,
predicted hydrolase monomer (ycaC) ,
3-ketoacyl-CoA thiolase (fadA) ,
CysH ,
peptidase D (pepD) ,
phosphoethanolamine transferase EptC ,
succinyl-CoA synthetase, α subunit (sucD) ,
NADP+-dependent aldehyde reductase (yghA) ,
conserved protein (rssA) ,
NADP+-dependent aldehyde reductase (ybbO) ,
subunit of E1p component of pyruvate dehydrogenase complex (aceE) ,
subunit of E1(0) component of 2-oxoglutarate dehydrogenase (sucA) ,
predicted phosphoribulokinase (prkB) ,
7-α-hydroxysteroid dehydrogenase (hdhA) ,
N-succinyl-L-diaminopimelate desuccinylase subunit (dapE) ,
predicted hydrolase (yecD) ,
EntB monomer ,
phosphogluconate dehydratase (edd) ,
predicted hydrolase, inner membrane (yejM) ,
GlgP ,
citrate synthase monomer (gltA) ,
Kbl ,
malonyl-CoA-ACP transacylase (fabD) ,
FabF ,
predicted enoyl-CoA reductase (ydiO) ,
isocitrate lyase monomer (aceA) ,
FabB ,
α-D-glucose-1-phosphatase (yihX) ,
uridine kinase / cytidine kinase (udk) ,
Ppk ,
predicted phosphatase (ytjC) ,
phosphopentomutase (deoB) ,
mannitol-1-phosphate 5-dehydrogenase (mtlD) ,
DeoA ,
SrlD ,
ArgI ,
predicted racemase (ygeA) ,
PabA ,
NAD(P)HX epimerase / NAD(P)HX dehydratase (yjeF) ,
phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase (hisI) ,
Rac prophage; predicted defective peptidase (rzpR) ,
fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (rfaE) ,
DLP12 prophage; predicted murein endopeptidase (rzpD) ,
NadR DNA-binding transcriptional repressor and NMN adenylyltransferase ,
thymidine kinase / deoxyuridine kinase (tdk) ,
pyruvate kinase II monomer (pykA) ,
AICAR transformylase / IMP cyclohydrolase (purH) ,
Gss ,
Amn ,
essential cell division protein FtsI; penicillin-binding protein 3 ,
pyruvate kinase I monomer (pykF) ,
Upp ,
UMP kinase (pyrH) ,
peptidase component of the HslVU protease ,
homoserine O-succinyltransferase (metA) ,
AppA ,
fumarase C monomer (fumC) ,
Ppc ,
predicted pseudouridine 5'-phosphate glycosidase (psuG) ,
FabH ,
Fcl ,
α-mannosidase (mngB) ,
FolD ,
6-phospho-β-glucosidase A (bglA) ,
DLP12 prophage; lysozyme (rrrD) ,
CP4-6 prophage; predicted xylosidase/arabinosidase (yagH) ,
FadJ monomer ,
predicted hydrolase (ycjT) ,
MaeB ,
predicted hydrolase (yegX) ,
Qin prophage; predicted lysozyme (rrrQ) ,
FlgJ ,
endo-1,4-D-glucanase (bcsZ) ,
β-D-glucoside glucohydrolase, periplasmic (bglX) ,
α-glucosidase (yihQ) ,
α-xylosidase (yicI) ,
α-amylase (amyA) ,
6-phospho-β-glucosidase; cryptic (ascB) ,
dodecenoyl-CoA δ-isomerase, enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase, 3-hydroxyacyl-CoA dehydrogenase (fadB) ,
glycogen phosphorylase-limit dextrin α-1,6-glucohydrolase (glgX) ,
endochitinase (chiA) ,
uracil-DNA glycosylase (ung) ,
6-phospho-β-glucosidase B; cryptic (bglB) ,
CysG ,
endonuclease III; specific for apurinic and/or apyrimidinic sites (nth) ,
Eda ,
evolved β-D-galactosidase, α subunit; cryptic gene (ebgA) ,
NADH-dependent dihydropyrimidine dehydrogenase subunit (preT) ,
probable 4-oxalocrotonate tautomerase (4-OT) monomer (pptA) ,
NADH-dependent dihydropyrimidine dehydrogenase subunit (preA)

Unification Links: GO:0008152


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Thu Nov 27, 2014, biocyc11.