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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0030288 - outer membrane-bounded periplasmic space

Synonyms: outer membrane bounded periplasmic space, outer membrane-enclosed periplasmic space

Definition: The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.

Parent Classes:
GO:0042597 - periplasmic space

Part Of:
GO:0030313 - cell envelope

Parts:
GO:0031236 - extrinsic component of periplasmic side of plasma membrane (4)

Term Members:
putative transport protein, periplasmic-binding component of ABC superfamily (ybaE),
periplasmic acid stress chaperone,
peptidoglycan glycosyltransferase (pbpC),
membrane-bound lytic murein transglycosylase D (mltD),
membrane-bound lytic murein transglycosylase C (mltC),
membrane-bound lytic murein transglycosylase B (mltB),
membrane-bound lytic murein exotransglycosylase A (mltA),
endolytic murein transglycosylase (mltG),
MrcB,
SgrR DNA-binding transcriptional dual regulator,
N-acetylmuramoyl-L-alanine amidase A (amiA),
N-acetylmuramoyl-L-alanine amidase B (amiB),
ABC complex for formation and release of holoCcmE - ATP binding subunit (ccmA),
curli secretion channel (csgG),
curli transport specificity factor (csgE),
alkyl sulfatase (yjcS),
conserved protein (bsmA),
formate dehydrogenase H (fdhF),
NrfG,
predicted lipoprotein (yjbF),
predicted cytochrome C peroxidase (yhjA),
biotin sulfoxide reductase (bisC),
colicin M resistance protein (cbrA),
arylsulfatase (aslA),
formate dehydrogenase-O, α subunit (fdoG),
Deg S monomer (degS),
glycoside hydrolase (ygjK),
adenine glycosylase; G.C --> T.A transversions (mutY),
conserved protein (yggE),
predicted protein (ygdR),
putative lipoprotein (ygdI),
membrane-bound lytic murein transglycosylase F (mltF),
nitric oxide dioxygenase (hmp),
hydrogenase 4, component H (hyfH),
penicillin binding protein 4B (yfeW),
YpdI colanic acid synthesis lipoprotein,
predicted protein (yfdX),
flavin transferase (ftp),
ferredoxin-type protein (napF),
galactose ABC transporter - periplasmic binding protein (mglB),
conserved protein (yehR),
predicted assembly protein AsmA,
L,D-transpeptidase ErfK (ldtA),
conserved protein (yedX),
flagellar protein (flhE),
predicted protein (yebF),
conserved protein (yobA),
NlpC-putative lipoprotein hydrolase,
L,D-transpeptidase LdtE,
murein DD-endopeptidase MepH,
oxidoreductase subunit (ynfF),
oxidoreductase subunit (ynfE),
stress response protein (ydeI),
Autoinducer-2 ABC transporter - periplasmic binding protein (lsrB),
acid resistance protein (ydeP),
putative sulfatase (ydeN),
predicted lipoprotein (yddW),
putative transport protein, ABC superfamily - periplasmic binding protein / polyhydroxybutyrate synthase (ydcS),
predicted lipoprotein (ydcL),
predicted protein (ydbJ),
OsmB osmotically inducible lipoprotein,
e14 prophage; conserved protein (ymfQ),
L,D-transpeptidase YcfS (ldtC),
FlgJ,
flagellar basal-body rod protein FlgC,
flagellar basal-body rod protein FlgB,
flagellar biosynthesis; assembly of basal-body periplasmic P ring (flgA),
hydrogenase 1, large subunit (hyaB),
protein involved in base analog detoxification (ycbX),
aliphatic sulfonate ABC transporter - periplasmic binding protein (ssuA),
putrescine ABC transporter - periplasmic binding protein (potF),
IaaA,
predicted protein (ybfP),
predicted lipoprotein (ybfN),
glutamate / aspartate ABC transporter - periplasmic binding protein (gltI),
outer membrane lipopolysaccharide transport and assembly complex - LptE subunit,
predicted protein (ybcH),
predicted outer membrane lipoprotein (ybaY),
predicted lipoprotein (yajI),
DD-endopeptidase / DD-carboxypeptidase (ampH),
taurine ABC transporter - periplasmic binding protein (tauA),
predicted aminopeptidase (yafT),
predicted lipoprotein (yaeF),
outer membrane lipoprotein NlpE, involved in surface sensing,
iron (III) hydroxamate ABC transporter - periplasmic binding protein (fhuD),
hypothetical protein (apaG),
multiple antibiotic resistance protein (marB),
DsbC monomer,
DsbGreduced,
predicted periplasmic pilin chaperone (yqiH),
predicted periplasmic pilus chaperone (yfcS),
E. coli common pilus chaperone - cryptic (ecpE),
predicted pilin chaperone, periplasmic (sfmC),
predicted periplasmic pilin chaperone (elfD),
putative fimbrial chaperone (ybgP),
predicted pilin chaperone (yraI),
predicted periplasmic pilin chaperone (ycbF),
molybdate ABC transporter - periplasmic binding protein (modA),
putative fimbrial chaperone (yehC),
probable pilin chaperone similar to PapD (yadV),
periplasmic chaperone, required for type 1 fimbriae (fimC),
thiamin ABC transporter - periplasmic binding protein (tbpA),
L-arginine ABC transporter - periplasmic binding protein (artJ),
periplasmic binding protein ArtI,
predicted periplasmic chaperone protein (yhcA),
phosphonate ABC transporter - periplasmic binding protein (phnD),
quinoprotein glucose dehydrogenase (gcd),
MepA,
histidine ABC transporter - periplasmic binding protein (hisJ),
glutamine ABC transporter - periplasmic binding protein (glnH),
cystine/cysteine ABC transporter - periplasmic binding protein (tcyJ),
AphA monomer,
branched chain amino acid ABC transporter - periplasmic binding protein (livJ),
flagellar P-ring protein FlgI,
lysine / arginine / ornithine ABC transporter - periplasmic binding protein (argT),
leucine ABC transporter - periplasmic binding protein (livK),
TonB energy transducing system - TonB subunit,
β-lactamase; penicillin resistance (ampC),
LptC,
periplasmic protein associated with repression of competance (ybaV),
protease III (ptrA),
chaperone/protease involved in the maintenance of OM integrity (bepA),
periplasmic nitrate reductase,
protein disulfide isomerase/protein disulfide oxidoreductase - DsbCreduced,
periplasmic chaperone, inhibitor of vertebrate C-type lysozyme,
periplasmic acid stress chaperone,
ferric coprogen outer membrane transport complex,
EfeB dimer,
aldehyde dehydrogenase,
multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1,
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase),
murein DD-endopeptidase, penicillin-insensitive,
serine protease Do,
EmrKY-TolC multidrug efflux transport system,
EmrAB-TolC multidrug efflux transport system,
ferric citrate outer membrane transport complex,
vitamin B12 outer membrane transport complex,
periplasmic protein with phosphoanhydride phosphatase and multiple inositol-polyphosphate phosphatase activity,
arginine decarboxylase, biosynthetic,
asparaginase II,
copper-containing amine oxidase,
periplasmic sensory protein associated with the TorRS two-component regulatory system (torT),
AcrAB-TolC multidrug efflux system - membrane fusion protein,
formate-dependent nitrite reductase - penta-heme cytochrome c (nrfB),
formate dependent nitrite reductase - NrfA subunit,
UDP-sugar hydrolase / 5'-ribonucleotidase / 5'-deoxyribonucleotidase (ushA),
trimethylamine N-oxide reductase, catalytic subunit (torA),
ferredoxin-type protein (napG),
subunit of periplasmic nitrate reductase, cytochrome c550 protein (napB),
large subunit of periplasmic nitrate reductase, molybdoprotein (napA),
glucose-1-phosphatase (agp),
CpxP,
peptidyl-prolyl cis-trans isomerase; in protein folding (fkpA),
serine endoprotease, periplasmic monomer (degQ),
stress-induced protein (ygiW),
N-acetylmuramyl-L-alanine amidase C (amiC),
rseB,
putative transport protein, ABC superfamily - periplasmic binding protein (yphF),
trimethylamine N-oxide reductase, TorZ subunit,
Spy,
acid shock protein (asr),
murein tripeptide ABC transporter OppBCDFMppA - periplasmic binding protein,
hemolysin E (hlyE),
inhibitor of g-type lysozyme (pliG),
conserved periplasmic protein (efeO),
L,D-transpeptidase YbiS (ldtB),
copper / silver efflux system - membrane fusion protein (cusB),
copper / silver efflux system - periplasmic binding protein and metallochaperone (cusF),
DLP12 prophage; periplasmic protein (ybcL),
aldehyde dehydrogenase, Fe-S subunit (paoA),
aldehyde dehydrogenase, FAD-binding subunit (paoB),
aldehyde dehydrogenase: molybdenum cofactor-binding subunit (paoC),
inhibitor of vertebrate C-type lysozyme (ivy),
formate dehydrogenase N, α subunit (fdnG),
periplasmic protein that coordinates peptidoglycan synthesis and outer membrane constriction during cell division (cpoB),
vitamin B12 ABC transporter - periplasmic binding protein (btuF),
multicopper oxidase with role in copper homeostasis (cueO),
EnvC divisome associated factor, activator of peptidoglycan hydrolases,
penicillin-binding protein 7 (pbpG),
β-D-glucoside glucohydrolase, periplasmic (bglX),
ZraP monomer,
periplasmic protein associated with synthesis of osmoregulated periplasmic glucans (OPGs) (opgG),
predicted protein (yceI),
heme-containing peroxidase/deferrochelatase (efeB),
HdeB monomer,
periplasmic chaperone, osmotically induced (osmY),
DNA-specific endonuclease I (endA),
endochitinase (chiA),
secretion monitor that regulates SecA translation (General Secretory Pathway) (secM),
RNase I, cleaves phosphodiester bond between any two nucleotides,
thiosulfate sulfurtransferase (pspE),
maltose regulon periplasmic protein (malM),
murein lipoprotein (lpp),
alkaline phosphatase isozyme conversion protein (iap),
regulator of FtsH protease (hflK),
regulator of FtsH protease (hflC),
γ-glutamyltranspeptidase (ggt),
ecotin monomer; serine protease inhibitor,
2'3' cyclic nucleotide phosphodiesterase/3' nucleotidase (cpdB),
SpeA,
AppA monomer,
TynA,
PhoA,
galactofuranose / galactopyranose ABC transporter - periplasmic binding protein (ytfQ),
glutathione ABC transporter - periplasmic binding protein (gsiB),
D-allose ABC transporter - periplasmic binding protein (alsB),
LptA,
putative transport protein, ABC superfamily - periplasmic binding protein (ygiS),
peptide ABC transporter - periplasmic binding protein (yejA),
glycine betaine ABC transporter - periplasmic binding protein (osmF),
YddS (ddpA),
putative transport protein, ABC superfamily - periplasmic binding component (ycjN),
xylose ABC transporter - periplasmic binding protein (xylF),
glycerol-3-phosphate ABC transporter - periplasmic binding protein (ugpB),
periplasmic binding protein SapA of predicted ABC transporter,
ribose ABC transporter - putative periplasmic binding protein (rbsB),
phosphate ABC transporter - periplasmic binding protein (pstS),
peptide ABC transporter - periplasmic binding protein (oppA),
nickel ABC transporter - periplasmic binding protein (nikA),
L-methionine / D-methionine ABC transporter - periplasmic binding protein (metQ),
maltose ABC transporter - periplasmic binding protein (malE),
ferric enterobactin ABC transporter - periplasmic binding protein (fepB),
ferric citrate ABC transporter - periplasmic binding protein (fecB),
arabinose ABC transporter - periplasmic binding protein (araF),
Zn2+ ABC transporter - periplasmic binding protein (znuA),
putative transport protein, ABC superfamily - periplasmic binding protein (yhdZ),
phosphoglycerol transferase II (opgB),
periplasmic protein (gltF),
tail-specific protease (prc),
dipeptidyl carboxypeptidase II (dcp),
MdtABC-TolC multidrug efflux transport system - putative membrane fusion protein,
D-Ala-D-Ala dipeptidase (ddpX),
SOS cell division inhibitor (sulA),
conserved protein (yncE),
asparaginase II (ansB),
HdeA monomer, chaperone active form,
periplasmic protein involved in nickel/cobalt efflux (rcnB),
γ-glutamyltranspeptidase,
periplasmic trehalase (treA),
periplasmic methionine sulfoxide reductase (msrP),
DegP,
periplasmic chaperone (skp),
peptidyl-prolyl cis-trans isomerase (PPIase) (surA),
probable 9-O-acetyl-N-acetylneuraminate esterase (nanS),
phospholipid ABC transporter - periplasmic binding protein (mlaC),
superoxide dismutase (Cu-Zn) (sodC),
TolB - periplasmic protein of the Tol-Pal system,
soluble lytic murein transglycosylase (slt),
meso-diaminopimelic acid-D-alanyl endopeptidase / D-alanyl-D-alanine carboxypeptidase (dacB),
predicted 4Fe-4S ferredoxin-type protein (ydhX),
dipeptide ABC transporter - periplasmic binding protein (dppA),
periplasmic chaperone, effects translocation of lipoproteins from inner membrane to outer (lolA),
2,3-diketo-L-gulonate:Na+ symporter - periplasmic binding protein (yiaO),
sulfate / thiosulfate ABC transporter - periplasmic binding protein CysP,
sulfate / thiosulfate ABC transporter - periplasmic binding protein Sbp,
putrescine / spermidine ABC transporter - periplasmic binding protein (potD),
protein disulfide oxidoreductase - DsbAreduced,
holocytochrome c synthetase - thiol:disulfide oxidoreductase CcmG,
N-acetylneuraminate mutarotase (nanM),
TesA,
cadmium-induced cadmium binding protein (zinT),
cell division protein required during stress conditions (ftsP),
glucan biosynthesis protein D (opgD),
TorT-TMAO,
aldose sugar dehydrogenase (yliI),
peptidyl-prolyl cis-trans isomerase A (rotamase A) (ppiA),
α-amylase (malS)

Unification Links: GO:0030288

Relationship Links: Wikipedia:RELATED-TO:Periplasmic_space


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by Pathway Tools version 20.0 (software by SRI International) on Fri May 6, 2016, BIOCYC13.