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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0042597 - periplasmic space

Synonyms: GO:0005620, periplasm

Definition: The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

Parent Classes:
GO:0044464 - cell part

Part Of:
GO:0005623 - cell

Child Classes:
GO:0030288 - outer membrane-bounded periplasmic space (258)

Parts:
GO:0031237 - intrinsic component of periplasmic side of plasma membrane (7)

Term Members:
trimethylamine N-oxide reductase, catalytic subunit (torA) ,
hydrogenase 2 - [Fe-S] binding, ferredoxin-type component HybA ,
outer membrane lipoprotein - activator of PBP1A activity (lpoA) ,
cadmium-induced cadmium binding protein (zinT) ,
reductase (yedY) ,
periplasmic protein involved in nickel/cobalt efflux (rcnB) ,
periplasmic chaperone, effects translocation of lipoproteins from inner membrane to outer (lolA) ,
glucan biosynthesis protein D (opgD) ,
N-acetylneuraminate mutarotase (nanM) ,
cell division protein required during stress conditions (ftsP) ,
meso-diaminopimelic acid-D-alanyl endopeptidase / D-alanyl-D-alanine carboxypeptidase (dacB) ,
dipeptide ABC transporter - periplasmic binding protein (dppA) ,
sulfate / thiosulfate ABC transporter - periplasmic binding protein CysP ,
periplasmic trehalase (treA) ,
soluble lytic murein transglycosylase (slt) ,
sulfate / thiosulfate ABC transporter - periplasmic binding protein Sbp ,
peptidyl-prolyl cis-trans isomerase A (rotamase A) (ppiA) ,
putrescine / spermidine ABC transporter - periplasmic binding protein (potD) ,
periplasmic chaperone (skp) ,
protein disulfide oxidoreductase - DsbAreduced ,
TesA ,
peptidyl-prolyl cis-trans isomerase (PPIase) (surA) ,
formate-dependent nitrite reductase - penta-heme cytochrome c (nrfB) ,
formate dependent nitrite reductase - NrfA subunit ,
TolB ,
UDP-sugar hydrolase / 5'-ribonucleotidase / 5'-deoxyribonucleotidase (ushA) ,
protease III (ptrA) ,
AnsB ,
chaperone/protease involved in the maintenance of OM integrity (bepA) ,
α-amylase (malS) ,
HokC, Gef toxin; interferes with membrane function when in excess ,
DsbGreduced ,
formate dehydrogenase-O, α subunit (fdoG) ,
acid stress chaperone (hdeB) ,
acid-resistance protein, possible chaperone (hdeA) ,
TonB energy transducing system ,
phosphoglycerol transferase II (opgB) ,
probable 9-O-acetyl-N-acetylneuraminate esterase (nanS) ,
N-acetylmuramoyl-L-alanine amidase 2 (amiB) ,
molybdopterin synthase sulfurtransferase (ynjE) ,
inhibitor of g-type lysozyme (pliG) ,
phospholipid ABC transporter - periplasmic binding protein (mlaC) ,
predicted protein (yahO) ,
predicted protein, hypochlorite stress response (rclB) ,
stress-induced protein (yhcN) ,
putative curli production protein (csgC) ,
protein induced by aluminum (ais) ,
CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter (flu) ,
thiosulfate sulfurtransferase (pspE) ,
predicted protein (yjfY) ,
predicted protein (yjfN) ,
protein involved in colanic acid production (mcbA) ,
predicted protein (ybiJ) ,
aldehyde dehydrogenase ,
aldehyde dehydrogenase, Fe-S subunit (paoA) ,
aldehyde dehydrogenase, FAD-binding subunit (paoB) ,
aldehyde dehydrogenase: molybdenum cofactor-binding subunit (paoC) ,
N-acetylmuramoyl-L-alanine amidase 1 (amiA) ,
N-acetylmuramyl-L-alanine amidase (amiC) ,
EnvC divisome associated factor, activator of peptidoglycan hydrolases ,
Autoinducer-2 ABC transporter - periplasmic binding protein (lsrB) ,
OsmF ,
periplasmic binding protein SapA of predicted ABC transporter ,
taurine ABC transporter - periplasmic binding protein (tauA) ,
predicted transporter subunit (ygiS) ,
predicted secretion pathway protein, C-type protein (yghF) ,
predicted peptidoglycan-binding enzyme (pbl) ,
Spy ,
predicted periplasmic pilin chaperone (yqiH) ,
predicted periplasmic pilus chaperone (yfcS) ,
DLP12 prophage; periplasmic protein (ybcL) ,
murein tripeptide ABC transporter OppBCDFMppA - periplasmic binding protein ,
hemolysin E (hlyE) ,
YphF ,
predicted pilin chaperone, periplasmic (sfmC) ,
copper / silver efflux system - periplasmic binding protein and metallochaperone (cusF) ,
conserved protein (yedX) ,
L,D-transpeptidase LdtE ,
YddS (ddpA) ,
YdcS ,
YcjN ,
L,D-transpeptidase YcfS (ldtC) ,
FlgJ ,
flagellar biosynthesis; assembly of basal-body periplasmic P ring (flgA) ,
predicted periplasmic pilin chaperone (elfD) ,
aliphatic sulfonate ABC transporter - periplasmic binding protein (ssuA) ,
glutathione ABC transporter - periplasmic binding protein (gsiB) ,
predicted membrane fusion protein (ybhG) ,
putative fimbrial chaperone (ybgP) ,
hydrogenase 2, small subunit (hybO) ,
lipoprotein (yraP) ,
secretion monitor that regulates SecA translation (General Secretory Pathway) (secM) ,
trimethylamine N-oxide reductase, TorZ subunit ,
TynA ,
YhdW ,
peptidyl-prolyl cis-trans isomerase; in protein folding (fkpA) ,
predicted pilin chaperone (yraI) ,
predicted periplasmic pilin chaperone (ycbF) ,
galactofuranose / galactopyranose ABC transporter - periplasmic binding protein (ytfQ) ,
D-allose ABC transporter - periplasmic binding protein (alsB) ,
conserved protein (ytfJ) ,
L,D-transpeptidase ErfK (ldtA) ,
Zn2+ ABC transporter - periplasmic binding protein (znuA) ,
predicted invasin (ychO) ,
serine endoprotease, periplasmic (degQ) ,
periplasmic sensory protein associated with the TorRS two-component regulatory system (torT) ,
glutamate / aspartate ABC transporter - periplasmic binding protein (gltI) ,
2,3-diketo-L-gulonate:Na+ symporter - periplasmic binding protein (yiaO) ,
predicted zinc-dependent peptidase (yhjJ) ,
xylose ABC transporter - periplasmic binding protein (xylF) ,
molybdate ABC transporter - periplasmic binding protein (modA) ,
vitamin B12 ABC transporter - periplasmic binding protein (btuF) ,
multicopper oxidase with role in copper homeostasis (cueO) ,
acid shock protein (asr) ,
large subunit of periplasmic nitrate reductase, molybdoprotein (napA) ,
nickel ABC transporter - periplasmic binding protein (nikA) ,
β-D-glucoside glucohydrolase, periplasmic (bglX) ,
putative fimbrial chaperone (yehC) ,
periplasmic protein associated with synthesis of osmoregulated periplasmic glucans (OPGs) (opgG) ,
probable pilin chaperone similar to PapD (yadV) ,
activator of formate-dependent nitrite reductase complex (nrfF) ,
periplasmic chaperone, required for type 1 fimbriae (fimC) ,
thiamin ABC transporter - periplasmic binding protein (tbpA) ,
heme-containing peroxidase/deferrochelatase (efeB) ,
putrescine ABC transporter - periplasmic binding protein (potF) ,
L-arginine ABC transporter - periplasmic binding protein (artJ) ,
periplasmic binding protein ArtI ,
predicted periplasmic chaperone protein (yhcA) ,
predicted assembly protein AsmA ,
DNA-specific endonuclease I (endA) ,
arylsulfatase (aslA) ,
formate dehydrogenase N, α subunit (fdnG) ,
peptide ABC transporter - periplasmic binding protein (oppA) ,
ecotin monomer; serine protease inhibitor ,
regulator for fec operon, periplasmic (fecR) ,
RNase I, cleaves phosphodiester bond between any two nucleotides ,
SpeA ,
glucose-1-phosphatase (agp) ,
γ-glutamyltranspeptidase (ggt) ,
phosphonate ABC transporter - periplasmic binding protein (phnD) ,
ferric dicitrate ABC transporter - periplasmic binding protein (fecB) ,
MepA ,
superoxide dismutase (Cu-Zn) (sodC) ,
phosphate ABC transporter - periplasmic binding protein (pstS) ,
glycerol-3-phosphate ABC transporter - periplasmic binding protein (ugpB) ,
rseB ,
glycine betaine / proline ABC transporter - periplasmic binding protein (proX) ,
penicillin-binding protein 7 (pbpG) ,
hyperosmotically inducible periplasmic protein (osmY) ,
maltose ABC transporter - periplasmic binding protein (malE) ,
histidine ABC transporter - periplasmic binding protein (hisJ) ,
glutamine ABC transporter - periplasmic binding protein (glnH) ,
L-cystine ABC transporter - periplasmic binding protein (fliY) ,
ferric enterobactin ABC transporter - periplasmic binding protein (fepB) ,
DsbC monomer ,
galactose ABC transporter - periplasmic binding protein (mglB) ,
periplasmic protein involved in bacteriophage sensitivity (dcrB) ,
CpxP ,
AphA monomer ,
LptA ,
stress-induced protein (ygiW) ,
branched chain amino acid ABC transporter - periplasmic binding protein (livJ) ,
inhibitor of vertebrate C-type lysozyme (ivy) ,
subunit of periplasmic nitrate reductase, cytochrome c550 protein (napB) ,
conserved periplasmic protein (efeO) ,
L,D-transpeptidase YbiS (ldtB) ,
zinc homeostasis protein (zraP) ,
conserved protein (yobA) ,
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (fklB) ,
predicted protein (yceI) ,
lipid hydroperoxide peroxidase (tpx) ,
flagellar P-ring protein FlgI ,
lysine / arginine / ornithine ABC transporter - periplasmic binding protein (argT) ,
GlpQ ,
2'3' cyclic nucleotide phosphodiesterase/3' nucleotidase (cpdB) ,
iron (III) hydroxamate ABC transporter - periplasmic binding protein (fhuD) ,
AppA ,
thioredoxin/glutathione peroxidase (btuE) ,
leucine ABC transporter - periplasmic binding protein (livK) ,
maltose regulon periplasmic protein (malM) ,
ribose ABC transporter - putative periplasmic binding protein (rbsB) ,
arabinose ABC transporter - periplasmic binding protein (araF) ,
β-lactamase; penicillin resistance (ampC) ,
PhoA ,
endochitinase (chiA)

Unification Links: GO:0042597


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 19.0 on Sun Apr 26, 2015, biocyc13.