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Metabolic Modeling Tutorial
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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0042710 - biofilm formation

Definition: A process in which microorganisms irreversibly attach to and grow on a surface and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.

Parent Classes:
GO:0044764 - multi-organism cellular process

Child Classes:
GO:0044010 - single-species biofilm formation (27)

Parts:
GO:0043708 - cell adhesion involved in biofilm formation (16)

Term Members:
AICAR transformylase / IMP cyclohydrolase (purH) ,
NtrC transcriptional dual regulator (glnG) ,
acetate kinase (ackA) ,
carbamoyl phosphate synthetase, β chain ,
poly-β-1,6-N-acetyl-D-glucosamine synthase - PgaC subunit ,
poly-β-1,6-N-acetyl-D-glucosamine synthase - PgaD subunit ,
predicted protein (ycgZ) ,
conserved outer membrane protein (ygiB) ,
quorum signal AI-2 exporter (tqsA) ,
conserved protein (yoaB) ,
predicted protein (yggN) ,
LldR transcriptional repressor ,
predicted DNA-binding transcriptional regulator (yghO) ,
poly-β-1,6-N-acetyl-D-glucosamine N-deacetylase (pgaB) ,
peptidyl-prolyl cis-trans isomerase (PPIase) (surA) ,
partially N-deacetylated poly-β-1,6-N-acetyl-D-glucosamine outer membrane porin (pgaA) ,
AlpA DNA-binding transcriptional activator; CP4-57 prophage ,
protein involved in biofilm formation (ymgC) ,
regulator of acid resistance, influenced by indole (ariR) ,
outer membrane protein involved in copper permeability, stress resistance and biofilm formation (bhsA) ,
predicted transposase (yjiP) ,
D-arabinose 5-phosphate isomerase (gutQ) ,
fumarase B monomer (fumB) ,
L-tartrate dehydratase, α subunit (ttdA) ,
small protein involved in biofilm formation and acid stress response (yceO) ,
23S rRNA m5C1962 methyltransferase monomer (rlmI) ,
predicted protein (yjbE) ,
predicted aldose-1-epimerase (yihR)

Unification Links: GO:0042710


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Tue Nov 25, 2014, BIOCYC14B.