Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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Escherichia coli K-12 substr. MG1655 Gene-Ontology-Terms Class: GO:0046872 - metal ion binding

Synonyms: metal binding

Definition: Interacting selectively and non-covalently with any metal ion.

Parent Classes:
GO:0043169 - cation binding

Child Classes:
GO:0000287 - magnesium ion binding (164) ,
GO:0005509 - calcium ion binding (12) ,
GO:0031420 - alkali metal ion binding (13) ,
GO:0046914 - transition metal ion binding (324)

Term Members:
D-Ala-D-Ala dipeptidase (ddpX) ,
phosphoribosylformylglycinamide synthetase (purL) ,
alkaline phosphatase isozyme conversion protein (iap) ,
6-phosphofructokinase-2 monomer (pfkB) ,
aldehyde reductase, NADPH-dependent (yahK) ,
GTP cyclohydrolase II (ribA) ,
chaperone/protease involved in the maintenance of OM integrity (bepA) ,
GTPase associated with the 50S subunit of the ribosome (hflX) ,
phosphatidylglycerophosphatase A (pgpA) ,
phosphatidylglycerophosphatase C (pgpC) ,
ribosome-binding ATPase, inhibitor of catalase activity (ychF) ,
cell division protein; predicted checkpoint GTPase (yihA) ,
RecB ,
malate synthase G (glcB) ,
Rnt ,
phosphoenolpyruvate carboxykinase (ATP) (pck) ,
RNase E (rne) ,
BetB ,
protein involved in threonylcarbamoyladenosine biosynthesis (tsaE) ,
ribonuclease G (RNAse G) monomer (rng) ,
OmpC ,
protein involved in threonylcarbamoyladenosine biosynthesis (tsaD) ,
polynucleotide phosphorylase monomer (pnp) ,
anthranilate synthase component I (trpE) ,
ADP- sugar pyrophosphatase (nudF) ,
fused predicted xanthine/hypoxanthine oxidase: molybdopterin-binding subunit and Fe-S binding subunit (xdhD) ,
predicted oxidoreductase, Fe-S subunit (ygfK) ,
sugar phosphatase (yfbT) ,
aldehyde dehydrogenase: molybdenum cofactor-binding subunit (paoC) ,
fructose-1-phosphatase (yqaB) ,
allantoate amidohydrolase monomer (allC) ,
β-phosphoglucomutase (ycjU) ,
2-deoxyglucose-6-phosphatase (yniC) ,
copper / silver efflux system - periplasmic binding protein and metallochaperone (cusF) ,
MaeB ,
dCMP phosphohydrolase (yfbR) ,
2-keto-3-deoxy-L-rhamnonate aldolase (yfaU) ,
Ni2+ / Co2+ efflux transporter (rcnA) ,
cadmium-induced cadmium binding protein (zinT) ,
c-di-GMP phosphodiesterase, heme-regulated (dosP) ,
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase (ybjI) ,
aldose sugar dehydrogenase (yliI) ,
sugar phosphatase (ybiV) ,
ribonucleoside diphosphate reductase 1, β subunit, ferritin-like (nrdB) ,
purine nucleotidase (yrfG) ,
D,D-heptose 1,7-bisphosphate phosphatase (gmhB) ,
dTDP-glucose pyrophosphorylase 2 (rffH) ,
SpeB ,
subunit of undecaprenyl diphosphate synthase (ispU) ,
RdgB ,
TynA ,
RNA ligase (rtcB) ,
3-keto-L-gulonate 6-phosphate decarboxylase (ulaD) ,
protein involved in CRISPR R-loop formation and dissociation (cas3) ,
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (gpmM) ,
NrdF ,
GDP-mannose hydrolase (nudK) ,
multicopper oxidase with role in copper homeostasis (cueO) ,
coproporphyrinogen III oxidase (hemF) ,
large subunit of periplasmic nitrate reductase, molybdoprotein (napA) ,
trimethylamine N-oxide reductase, catalytic subunit (torA) ,
ribonucleoside hydrolase 2 (pyrimidine-specific) (rihB) ,
NADH pyrophosphatase (nudC) ,
phosphoglycolate phosphatase (gph) ,
Gmm ,
trehalose-6-phosphate phosphatase (otsB) ,
6-phosphogluconate phosphatase (yieH) ,
3-methyl-2-oxobutanoate hydroxymethyltransferase monomer (panB) ,
transketolase I (tktA) ,
α-amylase (malS) ,
CodA ,
formate dehydrogenase N, α subunit (fdnG) ,
ArgE ,
phosphoenolpyruvate synthetase (ppsA) ,
adenosine-3'(2'),5'-bisphosphate nucleotidase (cysQ) ,
pyridoxal phosphatase / fructose 1,6-bisphosphatase (ybhA) ,
fructose-1,6-bisphosphatase (yggF) ,
catalase II (katE) ,
biotin sulfoxide reductase (bisC) ,
PdxA ,
nitrate reductase Z, α subunit (narZ) ,
dimethyl sulfoxide reductase, chain B (dmsB) ,
dimethyl sulfoxide reductase, chain A (dmsA) ,
5-phospho-α-D-ribosyl 1,2-cyclic phosphate phosphodiesterase (phnP) ,
hydrogenase 3, large subunit (hycE) ,
nitrate reductase A, γ subunit (narI) ,
SodB ,
superoxide dismutase (Cu-Zn) (sodC) ,
phosphoserine phosphatase (serB) ,
ribulose-5-phosphate 3-epimerase (rpe) ,
dihydroneopterin triphosphate pyrophosphohydrolase (nudB) ,
UMP phosphatase (umpH) ,
cAMP phosphodiesterase (cpdA) ,
chemotaxis regulator transmitting signal to flagellar motor component (cheY) ,
methionine aminopeptidase (map) ,
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase (yigB) ,
inositol monophosphatase (suhB) ,
GlmU ,
glyoxalase I (gloA) ,
cytochrome bd-I terminal oxidase subunit II (cydB) ,
cytochrome bo terminal oxidase subunit I (cyoB) ,
bacterioferritin monomer (bfr) ,
accessory protein for nickel incorporation into hydrogenase isoenzymes (hypB) ,
ATP-dependent zinc metalloprotease FtsH ,
iron-sulfur cluster assembly protein (iscA) ,
L-1,2-propanediol oxidoreductase (fucO) ,
hypoxanthine-guanine phosphoribosyltransferase (hpt) ,
FKBP-type peptidyl prolyl cis-trans isomerase (slyD) ,
fructose 1,6-bisphosphatase II (glpX) ,
ferritin iron storage protein (ftnA) ,
PldA ,
sugar phosphatase (yidA) ,
α-D-glucose-1-phosphatase (yihX) ,
pyrimidine nucleotidase (yjjG) ,
lysyl-tRNA synthetase (lysU) ,
endoribonuclease involved in maturation of 16S rRNA and ribosome quality control (ybeY) ,
methionine adenosyltransferase (metK) ,
3,4-dihydroxy-2-butanone 4-phosphate synthase (ribB) ,
Ppa ,
6-phosphofructokinase-1 monomer (pfkA) ,
methionine sulfoxide reductase B (msrB) ,
protein involved with the maturation of hydrogenases 1 and 2 (hybF) ,
accessory protein for nickel incorporation into hydrogenase 3 (hypA) ,
galactokinase (galK) ,
Eno ,
peptide deformylase ,
acetate kinase (ackA) ,
nitrate reductase A, α subunit (narG) ,
galactose-1-phosphate uridylyltransferase (galT) ,
8-oxo-dGTP diphosphatase (mutT) ,
Tdh ,
α-galactosidase monomer (melA) ,
AlkB repair system for alkylated DNA and RNA ,
glutathione synthetase monomer (gshB) ,
β-galactosidase monomer (lacZ) ,
PhoA ,
trimethylamine N-oxide reductase III, TorZ subunit ,
glycoside hydrolase (ygjK) ,
predicted synthetase/amidase with ATPase activity (yjfC) ,
phosphosugar phosphatase (yigL) ,
Gss ,
predicted enzyme with ATPase activity (ygiC) ,
CP4-44 prophage; antitoxin of the CbtA-CbeA toxin-antitoxin system ,
ribosomal protein-arginine oxygenase (roxA) ,
topoisomerase IV subunit B (parE) ,
carbon-phosphorous lyase (phnJ) ,
DNA topoisomerase III (topB) ,
propionate kinase (tdcD) ,
DNA gyrase, subunit B (gyrB) ,
NAD kinase monomer (nadK) ,
RNA pyrophosphohydrolase (rppH) ,
Mn2+ / Fe2+: H+ symporter MntH ,
NADPH-dependent aldehyde reductase (yqhD) ,
allantoinase monomer (allB) ,
guanine deaminase (guaD) ,
peptidyl-lysine acetyltransferase (pka) ,
predicted alcohol dehydrogenase in ethanolamine utilization (eutG) ,
porphyrinogen peroxidase (yfeX) ,
zinc-binding phosphatase (ycdX) ,
anhydro-N-acetylmuramoyl-L-alanine amidase ,
succinate:quinone oxidoreductase, membrane protein SdhC ,
6-carboxy-5,6,7,8-tetrahydropterin synthase (queD) ,
endonuclease VIII (nei) ,
predicted hydrolase (php) ,
PdxK ,
IadA ,
L-threonine dehydrogenase (yiaY) ,
predicted zinc-dependent peptidase (yhjJ) ,
taurine dioxygenase monomer (tauD) ,
23S rRNA m1G745 methyltransferase (rlmA) ,
acetyl-CoA synthetase (AMP-forming) (acs) ,
ATP-dependent helicase (dinG) ,
cobalamin-independent homocysteine transmethylase (metE) ,
FrmA ,
nitric oxide dioxygenase (hmp) ,
AccC ,
heat shock protein, integral membrane protein (htpX) ,
sulfite reductase, hemoprotein subunit (cysI) ,
cobalamin-dependent methionine synthase ,
SecA ,
reduced thioredoxin 2 (trxC) ,
oxalyl-CoA decarboxylase (oxc) ,
N-acetylglucosamine-6-phosphate deacetylase (nagA) ,
galactose ABC transporter - periplasmic binding protein (mglB) ,
GuaB ,
succinate:quinone oxidoreductase, membrane protein SdhC (sdhD) ,
DNA primase (dnaG) ,
cytochrome bd-I terminal oxidase subunit I (cydA) ,
Cdd ,
fructose bisphosphate aldolase monomer (fbaA) ,
diguanylate cyclase (dosC) ,
AdhE ,
acetyl-CoA carboxyltransferase, β subunit (accD) ,
Fur ,
threonyl-tRNA synthetase (thrS) ,
DNA gyrase inhibitor YacG ,
aspartate carbamoyltransferase, PyrI subunit ,
oligoribonuclease monomer (orn) ,
GTP cyclohydrolase I monomer (folE) ,
N5-carboxyaminoimidazole ribonucleotide synthetase monomer (purK) ,
chaperone protein DnaJ ,
nitrite reductase, large subunit (nirB) ,
ArgF ,
Ada DNA-binding transcriptional dual regulator ,
formamidopyrimidine DNA glycosylase (mutM) ,
PyrC ,
glutamyl-tRNA synthetase (gltX) ,
ArgI ,
alanyl-tRNA synthetase (alaS) ,
predicted 5-keto 4-deoxyuronate isomerase monomer (kduI) ,
multifunctional nuclease (cas1) ,
molybdenum cofactor cytidylyltransferase (mocA) ,
Dxs ,
pyridoxal phosphatase / HMP-PP hydrolase (cof) ,
ITPase/XTPase (yjjX) ,
molybdenum cofactor guanylyltransferase (mobA) ,
NAD(P)HX epimerase / NAD(P)HX dehydratase (yjeF) ,
cytochrome bd-II terminal oxidase subunit I (appC) ,
cytochrome bd-II terminal oxidase subunit II (appB) ,
formate hydrogenlyase complex iron-sulfur protein (hycF) ,
GatY ,
thiamin monophosphate kinase (thiL) ,
hydrogenase 3, Fe-S subunit (hycB) ,
RNase III (rnc) ,
MqsA antitoxin of the MqsRA toxin-antitoxin system and DNA-binding transcriptional repressor ,
predicted oxidoreductase (ydhV) ,
protein involved in repair of stress-damaged iron-sulfur clusters (ytfE) ,
endonuclease V (deoxyinosine 3'-endonuclease) (nfi) ,
4-hydroxy-2-ketovalerate aldolase (mhpE) ,
D-arabinose 5-phosphate isomerase (kdsD) ,
predicted DNase (yjjV) ,
KpLE2 phage-like element; predicted epimerase (sgcE) ,
allulose-6-phosphate 3-epimerase (alsE) ,
D-arabinose 5-phosphate isomerase (gutQ) ,
dethiobiotin synthetase monomer (bioD) ,
predicted metallodependent hydrolase (ycfH) ,
3-oxoacyl-[acyl-carrier-protein] reductase subunit (fabG) ,
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer (kdsC) ,
FlhC ,
predicted dethiobiotin synthetase (ynfK) ,
D-sedoheptulose 7-phosphate isomerase (lpcA) ,
pirin-like protein (yhhW) ,
flap endonuclease (ygdG) ,
thymidine kinase / deoxyuridine kinase (tdk) ,
adenosine deaminase (add) ,
nucleoside triphosphate pyrophosphohydrolase (mazG) ,
FolP ,
xanthine dehydrogenase subunit (xdhA) ,
7-cyano-7-deazaguanine synthase (queC) ,
broad-specificity exoaminopeptidase (ypdE) ,
diguanylate cyclase (ydaM) ,
conserved inner membrane protein (yedZ) ,
reductase (yedY) ,
predicted diguanylate cyclase (yedQ) ,
diguanylate cyclase (yeaP) ,
predicted diguanylate cyclase (yeaJ) ,
predicted transposase (ydcM) ,
diguanylate cyclase (ycdT) ,
predicted Nudix hydrolase (yfcD) ,
predicted diguanylate cyclase (yfiN) ,
ADP-sugar pyrophosphorylase (nudE) ,
KpLE2 phage-like element; predicted endoglucanase with Zn-dependent exopeptidase domain (sgcX) ,
predicted diguanylate cyclase (yegE) ,
dTDP-4-dehydrorhamnose reductase (rfbD) ,
predicted pseudouridine 5'-phosphate glycosidase (psuG) ,
frv operon protein (frvX) ,
diguanylate cyclase (dgcZ) ,
ThiS adenylyltransferase (thiF) ,
HMP-P synthase (thiC) ,
molybdopterin-synthase adenylyltransferase (moeB) ,
glutaredoxin 4 (grxD) ,
predicted diguanylate cyclase (adrA) ,
peptidase component of the HslVU protease ,
aldehyde dehydrogenase, Fe-S subunit (paoA) ,
L-Ala-D/L-Glu epimerase (ycjG) ,
geranyl diphosphate synthase / farnesyl diphosphate synthase (ispA) ,
DNA ligase ,
N-acetyl-anhydromuramyl-L-alanine-amidase (ampD) ,
octaprenyl diphosphate synthase (ispB) ,
Kbl ,
fructose-1,6-bisphosphatase monomer (fbp) ,
Dut ,
3-methyl-adenine DNA glycosylase I, constitutive (tag) ,
γ-glutamate-cysteine ligase (gshA) ,
ssDNA/RNA exonuclease, 3' → 5' specific (tatD) ,
D-alanine-D-alanine ligase B (ddlB) ,
glycerophosphodiester phosphodiesterase, cytosolic (ugpQ) ,
MenD ,
succinate:quinone oxidoreductase, iron-sulfur cluster binding protein (sdhB) ,
D-galactonate dehydratase (dgoD) ,
predicted DNA-binding transcriptional regulator (feoC) ,
nitrate reductase A, β subunit (narH) ,
essential respiratory protein A (erpA) ,
NadA ,
D-alanine-D-alanine ligase A (ddlA) ,
iron-sulfur cluster scaffold protein (nfuA) ,
L-rhamnonate dehydratase (yfaW) ,
ribosome small subunit-dependent GTPase A (rsgA) ,
phenylhydantoinase (hyuA) ,
fused predicted PTS enzyme : HPr component / enzyme I component / enzyme IIA component (ptsA) ,
nitrate reductase Z, β subunit (narY) ,
GTPase, involved in modification of U34 in tRNA (mnmE) ,
predicted ATPase, activator of (R)-hydroxyglutaryl-CoA dehdratase (yjiL) ,
formate dehydrogenase N, β subunit (fdnH) ,
TorC trimethylamine N-oxide reductase, cytochrome c-type subunit ,
formate dehydrogenase N, γ subunit (fdnI) ,
L-arabinose isomerase monomer (araA) ,
GlpQ ,
predicted dioxygenase (ygiD) ,
PtsI ,
N-acetylmannosamine kinase (nanK) ,
endodeoxyribonuclease RUS (Holliday junction resolvase) (rusA) ,
phosphoenolpyruvate-protein phosphotransferase PtsP, enzyme INtr ,
nitrate reductase Z, γ subunit (narV) ,
succinyl-CoA synthetase, β subunit ,
predicted chlorohydrolase/aminohydrolase (ssnA) ,
phosphoribosylamine-glycine ligase (purD) ,
fumarate reductase iron-sulfur protein (frdB) ,
fused predicted PTS enzyme: Hpr component / enzyme I component / enzyme IIA component (fryA) ,
α-mannosidase (mngB) ,
Cu+ efflux ATPase (copA) ,
homocysteine S-methyltransferase (mmuM) ,
DNA polymerase IV (Y-family DNA polymerase; translesion DNA synthesis) (dinB) ,
glucarate dehydratase-related protein (gudX) ,
predicted 4Fe-4S cluster-containing protein (ygcO) ,
predicted class II aldolase (ygbL) ,
flavorubredoxin (norV) ,
conserved protein (ygiQ) ,
isopentenyl diphosphate isomerase (idi) ,
fused predicted oxidoreductase, Fe-S subunit and nucleotide-binding subunit (ygfT) ,
predicted oxidoreductase, 4Fe-4S ferredoxin-type subunit (ygfS) ,
xanthine dehydrogenase, Fe-S subunit (xdhC) ,
oxidoreductase subunit (ynfF) ,
predicted 4Fe-4S ferredoxin-type protein (ydiT) ,
hydrogenase 4, small subunit (hyfI) ,
member of SoxR-reducing complex (rsxC) ,
acid resistance protein (ydeP) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ydjL) ,
predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain (ykgF) ,
hydrogenase 4, component H (hyfH) ,
predicted 4Fe-4S ferredoxin-type protein (ydhX) ,
oxidoreductase subunit (ynfE) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (yphC) ,
hydrogenase 4, large subunit (hyfG) ,
putative sulfatase (ydeN) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ybdR) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ydjJ) ,
2-methylcitrate dehydratase (prpD) ,
member of SoxR-reducing complex (rsxB) ,
pyridoxal kinase 2 (pdxY) ,
predicted protein (csiD) ,
hydroxyethylthiazole kinase (thiM) ,
lipid kinase (yegS) ,
predicted cytochrome (yodB) ,
predicted oxidoreductase (yeaX) ,
succinylglutamate desuccinylase (astE) ,
predicted anaerobic sulfatase maturation enzyme (ydeM) ,
ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit (paaE) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (ycjQ) ,
predicted isomerase/hydrolase (ycgM) ,
protein-lysine deacetylase and desuccinylase (cobB) ,
N-acetyl-D-glucosamine kinase (nagK) ,
predicted cytochrome b561 (yceJ) ,
predicted metal-binding enzyme (ycbL) ,
hybrid-cluster protein (hcp) ,
NADH oxidoreductase (hcr) ,
23S rRNA m5U747 methyltransferase (rlmC) ,
predicted pyruvate formate lyase activating enzyme (ybiY) ,
conserved protein (ybiX) ,
predicted hydratase (ybhJ) ,
FucI ,
Enzyme IIAGlc; Crr ,
hydrogenase 2, small subunit (hybO) ,
hydrogenase 1, small subunit (hyaA) ,
membrane anchored periplasmic heme chaperone CcmE ,
copper binding protein CutA ,
aminopeptidase A/I (pepA) ,
putative ferredoxin possibly involved in anaerobic carnitine metabolism (fixX) ,
tRNA-specific adenosine deaminase monomer (tadA) ,
phosphodiesterase (yfcE) ,
predicted peptidase (ygeY) ,
conserved protein (queE) ,
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ispH) ,
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (ispG) ,
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase monomer (ispF) ,
carbonic anhydrase 2 monomer (can) ,
HisG ,
lipoate synthase monomer (lipA) ,
GuaC ,
predicted hydrogenase, 4Fe-4S ferredoxin-type component (ysaA) ,
protein-tyrosine-phosphatase / phosphoprotein phosphatase (pphB) ,
protein phosphatase 1 modulates phosphoproteins, signals protein misfolding (pphA) ,
23S rRNA m5U1939 methyltransferase (rlmD) ,
pyruvate:flavodoxin oxidoreductase (ydbK) ,
predicted 4Fe-4S membrane protein (yccM) ,
predicted 4Fe-4S cluster-containing protein (yfhL) ,
glycolate oxidase, predicted iron-sulfur subunit (glcF) ,
predicted oxidoreductase (yggW) ,
trimethylamine N-oxide reductase III, c-type cytochrome subunit (torY) ,
Mlc DNA-binding transcriptional repressor ,
predicted oxidoreductase (ybdH) ,
S-ribosylhomocysteine lyase (luxS) ,
Dxr ,
predicted mutase (yhfW) ,
putative heat shock protein (ycaL) ,
predicted NUDIX hydrolase with low 3-phosphohydroxypyruvate phosphatase activity (nudL) ,
L-serine deaminase III (tdcG) ,
2,4-dienoyl-CoA reductase (fadH) ,
conserved protein (ybiI) ,
conserved protein (yggI) ,
ethanol dehydrogenase / alcohol dehydrogenase (adhP) ,
predicted pyruvate formate lyase activating enzyme (yjjW) ,
hydroxamate siderophore iron reductase (fhuF) ,
L-galactonate oxidoreductase (lgoD) ,
L-idonate 5-dehydrogenase (idnD) ,
L-ribulose 5-phosphate 4-epimerase (ulaF) ,
epoxyqueuosine reductase (queG) ,
lysine 2,3-aminomutase (epmB) ,
Zn2+ ABC transporter - periplasmic binding protein (znuA) ,
predicted oxidoreductase, Zn-dependent and NAD(P)-binding (rspB) ,
RfbA ,
L-ribulose-5-phosphate 4-epimerase (sgbE) ,
3-keto-L-gulonate 6-phosphate decarboxylase (sgbH) ,
zinc, cadmium and lead efflux system (zntA) ,
predicted cytochrome C peroxidase (yhjA) ,
predicted maturation peptidase for hydrogenase 2 (hybD) ,
predicted hydrogenase 2 cytochrome b type component (hybB) ,
putative oxidoreductase, Fe-S subunit (aegA) ,
aminopeptidase B (pepB) ,
phosphodiesterase (yaeI) ,
23S rRNA m2A2503 methyltransferase and tRNA m2A37 methyltransferase (rlmN) ,
phosphoglucomutase (pgm) ,
bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase (acnB) ,
ferredoxin-type protein (napH) ,
NADH:ubiquinone oxidoreductase, chain G (nuoG) ,
transketolase II (tktB) ,
predicted protein (yehQ) ,
phosphoribosylglycinamide formyltransferase 2 (purT) ,
activator of formate-dependent nitrite reductase complex (nrfF) ,
probable pyruvate formate lyase 2 activating enzyme (pflC) ,
formate dehydrogenase-O, α subunit (fdoG) ,
L-rhamnose isomerase (rhaA) ,
rhamnulose-1-phosphate aldolase monomer (rhaD) ,
coproporphyrinogen III dehydrogenase (hemN) ,
NADH:ubiquinone oxidoreductase, chain F (nuoF) ,
putative zinc peptidase (pqqL) ,
glyoxalase III, Hsp31 molecular chaperone (hchA) ,
heme-containing peroxidase/deferrochelatase (efeB) ,
predicted phospho-glucosidase, truncated (glvG) ,
putative sulfatase (yidJ) ,
phosphoglucosamine mutase (glmM) ,
molybdopterin biosynthesis protein A (moaA) ,
L-serine deaminase II (sdaB) ,
tyrosine lyase (thiH) ,
thiamine phosphate synthase (thiE) ,
hydrogenase maturation protein, carbamoyltransferase (hypF) ,
LeuB ,
peptidase T ,
o-succinylbenzoate synthase (menC) ,
ribonucleoside-triphosphate reductase (nrdD) ,
glutamyl-Q tRNAAsp synthetase (gluQ) ,
oligopeptidase A (prlC) ,
ScpA ,
aldehyde reductase, NADPH-dependent (ahr) ,
malate dehydrogenase, NAD-requiring (maeA) ,
α-amylase (amyA) ,
outer membrane metallopeptidase (loiP) ,
NADH-dependent dihydropyrimidine dehydrogenase subunit (preA) ,
predicted anaerobic sulfatase maturation enzyme (aslB) ,
arylsulfatase (aslA) ,
fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (ribD) ,
aconitate hydratase 1 (acnA) ,
DNA recombination protein (radA) ,
AcpS ,
HypD, scaffold protein for assembly of the Fe-(CN)2CO cofactor ,
phosphomannomutase (cpsG) ,
dipeptidyl carboxypeptidase II (dcp) ,
ferrochelatase (hemH) ,
PhoQ sensory histidine kinase ,
GarL ,
hydrogenase 4, component A (hyfA) ,
cysteinyl-tRNA synthetase (cysS) ,
pyruvate kinase II monomer (pykA) ,
SpeA ,
proline dipeptidase (pepQ) ,
protein involved in processing of HyaA and HyaB proteins (hyaD) ,
phosphopantetheinyl transferase (entD) ,
primosome factor N' (priA) ,
adenine glycosylase; G.C --> T.A transversions (mutY) ,
monoacetylchitobiose-6-phosphate hydrolase (chbF) ,
hydrogenase 3 and formate hydrogenlyase complex, HycG subunit ,
L-serine deaminase I (sdaA) ,
peptidase D (pepD) ,
PepP ,
fumarase B monomer (fumB) ,
hydroperoxidase I (katG) ,
biotin synthase monomer (bioB) ,
molybdopterin molybdenumtransferase (moeA) ,
RNAse HII, degrades RNA of DNA-RNA hybrids (rnhB) ,
ribosomal protein S6 modification protein (rimK) ,
MepA ,
IscR DNA-binding transcriptional dual regulator ,
PurF ,
murein DD-endopeptidase MepM ,
conserved metal-binding protein (ybgI) ,
subunit of E1p component of pyruvate dehydrogenase complex (aceE) ,
NADH:ubiquinone oxidoreductase, chain I (nuoI) ,
NADH:ubiquinone oxidoreductase, chain E (nuoE) ,
NADH:ubiquinone oxidoreductase, chain B (nuoB) ,
NsrR ,
hydrogenase 3 maturation protease (hycI) ,
D-glucarate dehydratase (gudD) ,
GlpF ,
formate dehydrogenase-O, γ subunit (fdoI) ,
ribosomal protein S12 D88 methylthiotransferase (rimO) ,
isopentenyl-adenosine A37 tRNA methylthiolase (miaB) ,
RseP zinc protease, signal peptide peptidase ,
N-succinyl-L-diaminopimelate desuccinylase subunit (dapE) ,
bacterioferritin-associated ferredoxin (bfd) ,
AphA monomer ,
pyruvate kinase I monomer (pykF) ,
ZntR transcriptional activator ,
SoxR DNA-binding transcriptional dual regulator ,
hydrogenase 2, large subunit (hybC) ,
hydrogenase 1, large subunit (hyaB) ,
porphobilinogen synthase (hemB) ,
glyoxalase II (gloB) ,
fumarase A monomer ,
2Fe-2S cluster-containing protein involved in diferric-tyrosyl radical cofactor maintenance (yfaE) ,
3-phenylpropionate dioxygenase, predicted ferredoxin subunit (hcaC) ,
stationary phase nucleoid protein that sequesters iron and protects DNA from damage (dps) ,
RNA polymerase-binding transcription factor DksA ,
2Fe-2S cluster-containing protein (yeaW) ,
3-phenylpropionate dioxygenase, α subunit (hcaE) ,
Dfp ,
CcmH ,
periplasmic nitrate reductase, cytochrome c protein (napC) ,
subunit of periplasmic nitrate reductase, cytochrome c550 protein (napB) ,
formate-dependent nitrite reductase - penta-heme cytochrome c (nrfB) ,
formate dependent nitrite reductase - NrfA subunit ,
carbonic anhydrase monomer (cynT) ,
cytochrome b561 (cybB) ,
Mg2+ / Ni2+ transporting ATPase (mgtA) ,
FucA ,
endonuclease III; specific for apurinic and/or apyrimidinic sites (nth) ,
KbaY ,
lipopolysaccharide assembly protein LapB ,
hydrogenase 1, b-type cytochrome subunit (hyaC) ,
predicted ferredoxin (ykgJ) ,
predicted 4Fe-4S ferredoxin-type protein (ydhY) ,
ferredoxin-type protein (napG) ,
ferredoxin-type protein (napF) ,
formate-dependent nitrite reductase, 4Fe-4S subunit (nrfC) ,
putative electron transport protein HydN ,
hydrogenase 2 4Fe-4S ferredoxin-type component (hybA) ,
formate dehydrogenase-O, β subunit (fdoH) ,
oxidoreductase, predicted Fe-S subunit (ynfG) ,
conserved protein (yobA) ,
GldA ,
galactitol-1-phosphate dehydrogenase (gatD) ,
reduced ferredoxin (fdx) ,
NrdG ,
pyruvate formate-lyase activating enzyme (pflA) ,
Gpt ,
citrate lyase, citryl-ACP lyase β subunit (citE) ,
CueR transcriptional dual regulator ,
YeiL DNA-binding transcriptional activator ,
FNR ,
anaerobic glycerol-3-phosphate dehydrogenase subunit C (glpC) ,
Rbn ,
lysyl tRNA synthetase (LysRSs), constitutive (lysS) ,
NrdR ,
broad specificity 5'(3')-nucleotidase and polyphosphatase (umpG) ,
Holliday junction nuclease; resolution of structures; repair (ruvC) ,
RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication (rnhA) ,
50S ribosomal subunit protein L31 (rpmE) ,
recombination and repair (recR) ,
PurA ,
Ndk ,
ribose-phosphate diphosphokinase (prs) ,
NikR DNA-binding transcriptional repressor, Ni-binding ,
phosphopentomutase (deoB) ,
ClpX ,
GlpK ,
shikimate kinase II (aroL) ,
shikimate kinase I (aroK) ,
endonuclease IV (nfo) ,
LeuC ,
excision nuclease subunit A (uvrA) ,
glutamate synthase, small subunit (gltD) ,
glutamate synthase, large subunit (gltB) ,
DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway (vsr) ,
exonuclease III (xthA) ,
2'3' cyclic nucleotide phosphodiesterase/3' nucleotidase (cpdB) ,
phenylalanyl-tRNA synthetase α-chain (pheS) ,
L-ribulose 5-phosphate 4-epimerase monomer (araD) ,
Icd ,
acetohydroxy acid synthase I, large subunit (ilvB) ,
formate dehydrogenase H (fdhF) ,
phenylalanyl-tRNA synthetase β-chain (pheT) ,
UDP-sugar hydrolase / 5'-ribonucleotidase / 5'-deoxyribonucleotidase (ushA) ,
HisD ,
fused tRNA nucleotidyltransferase / 2',3'-cyclic phosphodiesterase / 2' nucleotidase and phosphatase (cca) ,
DNA topoisomerase I (topA) ,
vitamin B12 / E colicin / bacteriophage BF23 outer membrane porin BtuB ,
L-tartrate dehydratase, α subunit (ttdA) ,
IlvD ,
protease III (ptrA) ,
aminopeptidase N (pepN) ,
K+ transporting ATPase - ATP binding subunit (kdpB) ,
DNA polymerase III, ε subunit (dnaQ) ,
carbamoyl phosphate synthetase, β chain ,
methionyl-tRNA synthetase (metG) ,
isoleucyl-tRNA synthetase (ileS) ,
mannose-6-phosphate isomerase (manA) ,
XylA ,
IlvI ,
acetolactate synthase II, large subunit, C-ter fragment (pseudogene) (ilvG_2) ,
acetolactate synthase II, large subunit, N-ter fragment (pseudogene) (ilvG_1) ,
SodA

Unification Links: GO:0046872


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Fri Nov 28, 2014, biocyc13.