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Escherichia coli K-12 substr. MG1655 Reactions Class: Protein-Modification Reactions

Summary:
Reactions in which a protein (such as a monomer, a protein complex or a modified protein) is covalently modified.

Parent Classes:
Chemical Reactions,
Protein-Reactions

Instances:
1.1.1.100: a (3R)-3-hydroxy cis Δ7-tetradecenoyl-[acp] + NADP+ ← a 3-oxo-cis7-tetradecenoyl-[acp] + NADPH + H+,
1.1.1.100: a (3R)-3-hydroxy cis Δ9-hexadecenoyl-[acp] + NADP+ ← a 3-oxo-cis9-hexadecenoyl-[acp] + NADPH + H+,
1.1.1.100: a (3R)-3-hydroxyglutaryl-[acp] methyl ester + NADP+ ← a 3-oxo-glutaryl-[acp] methyl ester + NADPH + H+,
1.1.1.100: a (3R)-3-hydroxypimeloyl-[acp] methyl ester + NADP+ ← a 3-oxo-pimeloyl-[acp] methyl ester + NADPH + H+,
1.1.1.100: (R)-3-hydroxy-cis-vacc-11-enoyl-[acp] + NADP+ ← a 3-oxo-cis-vacc-11-enoyl-[acp] + NADPH + H+,
1.1.1.100: a (3R,5Z)-3-hydroxy-dodec-5-enoyl-[acp] + NADP+ ← a (5Z)-3-oxo-dodec-5-enoyl-[acp] + NADPH + H+,
1.2.4.1: pyruvate + a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine + H+ → a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine + CO2,
1.2.4.2: 2-oxoglutarate + a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine + H+ → a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine + CO2,
1.2.4.2: 2-oxoglutarate + SucB-lipoate = SucB-S-succinyldihydrolipoate + CO2,
1.2.7.1: pyruvate + an oxidized flavodoxin + coenzyme A + H+ → acetyl-CoA + CO2 + a reduced flavodoxin,
1.2.7.1: pyruvate + 2 an oxidized ferredoxin [iron-sulfur] cluster + coenzyme A ↔ acetyl-CoA + CO2 + 2 a reduced ferredoxin [iron-sulfur] cluster + H+,
1.3.1.9: an acyl-[acyl-carrier protein] + NAD+ = a trans-2-enoyl-[acyl-carrier protein] + NADH + H+,
1.3.1.9: a 2,3,4-saturated fatty acyl-[acp] + NAD+ ← a trans-2-enoyl-[acyl-carrier protein] + NADH + H+,
1.3.1.9: a cis7-tetradecenoyl-[acp] + NAD+ ← a trans3-cis7-tetradecenoyl-[acp] + NADH + H+,
1.3.1.9: a palmitoleoyl-[acp] + NAD+ ← a trans3-cis9-hexadecenoyl-[acp] + NADH + H+,
1.3.1.9: a glutaryl-[acp] methyl ester + NAD+ ← an enoylglutaryl-[acp] methyl ester + NADH + H+,
1.3.1.9: a pimeloyl-[acp] methyl ester + NAD+ ← an enoylpimeloyl-[acp] methyl ester + NADH + H+,
1.3.1.9: a cis-vaccenoyl-[acp] + NAD+ ← a (2-trans-11-cis)-vaccen-2-enoyl-[acp] + NADH + H+,
1.3.1.9: a butyryl-[acp] + NAD+ ← a crotonyl-[acp] + NADH + H+,
1.3.1.9: a hexanoyl-[acyl-carrier-protein] + NAD+ ← a trans hex-2-enoyl-[acp] + NADH + H+,
1.3.1.9: an octanoyl-[acp] + NAD+ ← a trans oct-2-enoyl-[acp] + NADH + H+,
1.3.1.9: a decanoyl-[acp] + NAD+ ← a (2E)-dec-2-enoyl-[acp] + NADH + H+,
1.3.1.9: a dodecanoyl-[acp] + NAD+ ← a (2E)-dodec-2-enoyl-[acp] + NADH + H+,
1.3.1.9: a myristoyl-[acp] + NAD+ ← a trans tetradec-2-enoyl-[acp] + NADH + H+,
1.3.1.9: a palmitoyl-[acp] + NAD+ ← a trans hexadecenoyl-[acp] + NADH + H+,
1.3.1.9: a (5Z)-dodec-5-enoyl-[acp] + NAD+ ← a (3E,5Z)-dodeca-3,5-dienoyl-[acp] + NADH + H+,
1.3.1.39/1.3.1.104/2.3.1.85/2.3.1.86: a 2,3,4-saturated fatty acyl-[acp] + NADP+ ← a trans-2-enoyl-[acyl-carrier protein] + NADPH + H+,
1.4.4.2: glycine + a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine + H+ ↔ a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine + CO2,
1.6.-.-: hybrid-cluster proteinox + NADH = hybrid-cluster proteinred + NAD+,
1.7.2.2: 6 a reduced c-type cytochrome[periplasm] + nitrite[periplasm] + 8 H+[periplasm] → ammonium[periplasm] + 6 an oxidized c-type cytochrome[periplasm] + 2 H2O[periplasm],
1.7.2.3: trimethylamine + 2 an oxidized c-type cytochrome + H2O = trimethylamine N-oxide + 2 a reduced c-type cytochrome + 3 H+,
1.8.1.4: a [lipoyl-carrier protein] N6-dihydrolipoyl-L-lysine + NAD+ = a [lipoyl-carrier protein]-N6-lipoyl-L-lysine + NADH + H+,
1.8.1.4: a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine + NAD+ → a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine + NADH + H+,
1.8.1.4: a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine + NAD+ ↔ a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine + NADH + H+,
1.8.1.4: a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine + NAD+ → a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine + NADH + H+,
1.8.1.9: a reduced thioredoxin + NADP+ ← an oxidized thioredoxin + NADPH + H+,
1.8.4.8: adenosine 3',5'-bisphosphate + sulfite + an oxidized thioredoxin + 2 H+ ← 3'-phosphoadenylyl-sulfate + a reduced thioredoxin,
1.8.4.11: a [protein]-L-methionine + an oxidized thioredoxin + H2O ← a protein-L-methionine-(S)-S-oxide + a reduced thioredoxin,
1.8.4.12: a [protein]-L-methionine + an oxidized thioredoxin + H2O = a protein-L-methionine-(R)-S-oxide + a reduced thioredoxin,
1.8.4.13: L-methionine + an oxidized thioredoxin + H2O ← L-methionine-(S)-S-oxide + a reduced thioredoxin,
1.8.4.14: L-methionine + an oxidized thioredoxin + H2O ← L-methionine-(R)-S-oxide + a reduced thioredoxin,
1.8.4.-: 2 glutathione + an oxidized glutaredoxin → glutathione disulfide + a reduced glutaredoxin,
1.11.1.15: an organic hydroperoxide + a reduced thioredoxin → an alcohol + an oxidized thioredoxin + H2O,
1.11.1.16: a reduced thioredoxin + hydrogen peroxide → an oxidized thioredoxin + 2 H2O,
1.17.4.1: dADP + an oxidized thioredoxin + H2O ↔ ADP + a reduced thioredoxin,
1.17.4.1: dCDP + an oxidized thioredoxin + H2O ← CDP + a reduced thioredoxin,
1.17.4.1: dGDP + an oxidized thioredoxin + H2O ← GDP + a reduced thioredoxin,
1.17.4.1: an oxidized thioredoxin + a 2'-deoxyribonucleoside 5'-diphosphate + H2O ← a reduced thioredoxin + a ribonucleoside diphosphate,
1.17.4.1: dCDP + an oxidized NrdH glutaredoxin-like protein + H2O ← CDP + a reduced NrdH glutaredoxin-like protein,
1.17.4.1: dUDP + an oxidized NrdH glutaredoxin-like protein + H2O ← UDP + a reduced NrdH glutaredoxin-like protein,
1.17.4.1: dADP + an oxidized NrdH glutaredoxin-like protein + H2O ← ADP + a reduced NrdH glutaredoxin-like protein,
1.17.4.1: dGDP + an oxidized NrdH glutaredoxin-like protein + H2O ← GDP + a reduced NrdH glutaredoxin-like protein,
1.17.4.1: dUDP + an oxidized thioredoxin + H2O ← UDP + a reduced thioredoxin,
1.17.4.2: dCTP + an oxidized flavodoxin + H2O ← CTP + a reduced flavodoxin,
1.17.4.2: dUTP + an oxidized flavodoxin + H2O ← UTP + a reduced flavodoxin,
1.17.4.2: dATP + an oxidized flavodoxin + H2O ← ATP + a reduced flavodoxin,
1.17.4.2: dGTP + an oxidized flavodoxin + H2O ← GTP + a reduced flavodoxin,
1.18.1.2: an oxidized flavodoxin + NADPH + H+ = a reduced flavodoxin + NADP+,
1.18.1.3: 2 a reduced [2Fe-2S] ferredoxin + NAD+ + H+ = 2 an oxidized [2Fe-2S] ferredoxin + NADH,
1.18.1.-: oxidized flavorubredoxin + NADH = reduced flavorubredoxin + NAD+,
1.18.1.-: reduced flavorubredoxin + 2 nitric oxide → oxidized flavorubredoxin + nitrous oxide + H2O,
1.20.4.1: arsenate + a reduced glutaredoxin + H+ ↔ arsenite + an oxidized glutaredoxin + H2O,
1.97.1.4: pyruvate formate-lyase (inactive) + a reduced flavodoxin + S-adenosyl-L-methionine → 5'-deoxyadenosine + L-methionine + pyruvate formate-lyase / 2-ketobutyrate formate-lyase + an oxidized flavodoxin,
1.97.1.4: 2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive + a reduced flavodoxin + S-adenosyl-L-methionine = 5'-deoxyadenosine + 2-ketobutyrate formate-lyase / pyruvate formate-lyase 4 + an oxidized flavodoxin,
2.1.1.63: a [protein]-L-cysteine + a DNA containing 6-O-methylguanine = a [protein]-S-methyl-L-cysteine + DNA (without 6-O-methylguanine),
2.1.1.80: a [protein]-α-L-glutamate + S-adenosyl-L-methionine → a [protein]-L-glutamate-O5-methyl-ester + S-adenosyl-L-homocysteine,
2.1.1.-: S-adenosyl-L-methionine + a protein = a methylated protein,
2.1.1.-: S-adenosyl-L-methionine + TsrgluS-adenosyl-L-homocysteine + Tsrglu-Me,
2.1.1.-: S-adenosyl-L-methionine + TrggluS-adenosyl-L-homocysteine + Trgglu-Me,
2.1.1.-: S-adenosyl-L-methionine + TargluS-adenosyl-L-homocysteine + Targlu-Me,
2.1.1.-: S-adenosyl-L-methionine + TapgluS-adenosyl-L-homocysteine + Tapglu-Me,
2.1.2.10: a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine + a tetrahydrofolate ↔ a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine + a 5,10-methylene-tetrahydrofolate + ammonium,
2.3.1.12: acetyl-CoA + a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine ← a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine + coenzyme A,
2.3.1.15: sn-glycerol 3-phosphate + an acyl-[acyl-carrier protein] → a 1-acyl-sn-glycerol 3-phosphate + a holo-[acyl-carrier protein],
2.3.1.15: a cis-vaccenoyl-[acp] + sn-glycerol 3-phosphate → 1-cis-vaccenoylglycerol-3-phosphate + a holo-[acyl-carrier protein],
2.3.1.15: a myristoyl-[acp] + sn-glycerol 3-phosphate → 1-myristoylglycerol 3-phosphate + a holo-[acyl-carrier protein],
2.3.1.15: a palmitoyl-[acp] + sn-glycerol 3-phosphate → 1-palmitoylglycerol 3-phosphate + a holo-[acyl-carrier protein],
2.3.1.41: an acyl-[acyl-carrier protein] + a malonyl-[acp] + H+ = a 3-oxoacyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.41: a (5Z)-dodec-5-enoyl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-cis7-tetradecenoyl-[acp] + a holo-[acyl-carrier protein] + CO2,
2.3.1.41: a cis7-tetradecenoyl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-cis9-hexadecenoyl-[acp] + a holo-[acyl-carrier protein] + CO2,
2.3.1.41: a malonyl-[acp] methyl ester + a malonyl-[acp] + H+ → a 3-oxo-glutaryl-[acp] methyl ester + CO2 + a holo-[acyl-carrier protein],
2.3.1.41: a glutaryl-[acp] methyl ester + a malonyl-[acp] + H+ → a 3-oxo-pimeloyl-[acp] methyl ester + CO2 + a holo-[acyl-carrier protein],
2.3.1.41: a (3Z)-dec-3-enoyl-[acp] + a malonyl-[acp] + H+ → a (5Z)-3-oxo-dodec-5-enoyl-[acp] + a holo-[acyl-carrier protein] + CO2,
2.3.1.49: [a holo citrate lyase acyl-carrier protein] + S-acetyl phosphopantetheine → an acetyl-[holo citrate lyase acyl-carrier protein] + 4'-phosphopantetheine,
2.3.1.51: a 1-acyl-sn-glycerol 3-phosphate + an acyl-[acyl-carrier protein] → a 1,2-diacyl-sn-glycerol 3-phosphate + a holo-[acyl-carrier protein],
2.3.1.51: a palmitoleoyl-[acp] + 1-palmitoylglycerol 3-phosphate → 1-palmitoyl-2-palmitoleoyl phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: a palmitoleoyl-[acp] + 1-cis-vaccenoylglycerol-3-phosphate → 1-cis-vaccenoyl-2-palmitoleoyl phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: a cis-vaccenoyl-[acp] + 1-palmitoylglycerol 3-phosphate → 1-palmitoyl-2-cis-vaccenoyl phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: a cis-vaccenoyl-[acp] + 1-cis-vaccenoylglycerol-3-phosphate → 1,2-dicis-vaccenoyl-phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: palmitoleoyl-CoA + 1-myristoylglycerol 3-phosphate → 1-myristoyl-2-palmitoleoyl phosphatidate + coenzyme A,
2.3.1.51: a palmitoleoyl-[acp] + 1-myristoylglycerol 3-phosphate → 1-myristoyl-2-palmitoleoyl phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: myristoyl-CoA + 1-myristoylglycerol 3-phosphate → dimyristoyl phosphatidate + coenzyme A,
2.3.1.51: a myristoyl-[acp] + 1-myristoylglycerol 3-phosphate → dimyristoyl phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: 1-palmitoylglycerol 3-phosphate + myristoyl-CoA → 1-palmitoyl-2-myristoyl phosphatidate + coenzyme A,
2.3.1.51: 1-palmitoylglycerol 3-phosphate + a myristoyl-[acp] → 1-palmitoyl-2-myristoyl phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: a 2,3,4-saturated 2-lysophosphatidate + a 2,3,4-saturated fatty acyl-[acp] = a 2,3,4-saturated L-phosphatidate + a holo-[acyl-carrier protein],
2.3.1.51: 1-palmitoylglycerol 3-phosphate + a palmitoyl-[acp] → dipalmitoyl phosphatidate + a holo-[acyl-carrier protein],
2.3.1.61: succinyl-CoA + a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine → a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine + coenzyme A,
2.3.1.86/4.2.1.59: a (3R)-3-hydroxyacyl-[acyl-carrier protein] → a trans-2-enoyl-[acyl-carrier protein] + H2O,
2.3.1.86: a (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ ← a 3-oxoacyl-[acp] + NADPH + H+,
2.3.1.86: a malonyl-[acp] + an acetyl-[acp] + H+ → a holo-[acyl-carrier protein] + an acetoacetyl-[acp] + CO2,
2.3.1.86: a malonyl-[acp] + a 2,3,4-saturated fatty acyl-[acp] + H+ → a holo-[acyl-carrier protein] + a 3-oxoacyl-[acp] + CO2,
2.3.1.86/4.2.1.59: a (3R)-3-hydroxybutanoyl-[acp] → a crotonyl-[acp] + H2O,
2.3.1.86/4.2.1.59: a (3R)-3-hydroxyoctanoyl-[acp] → a trans oct-2-enoyl-[acp] + H2O,
2.3.1.86/4.2.1.59: a (3R)-3-hydroxypalmitoyl-[acp] → a trans hexadecenoyl-[acp] + H2O,
2.3.1.86: a holo-[acyl-carrier protein] + acetyl-CoA ↔ an acetyl-[acp] + coenzyme A,
2.3.1.40: an acyl-[acyl-carrier protein] + a 2-acyl-1-lyso-phosphatidylethanolamine ↔ a holo-[acyl-carrier protein] + an L-1-phosphatidylethanolamine,
2.3.1.86: a holo-[acyl-carrier protein] + malonyl-CoA ↔ a malonyl-[acp] + coenzyme A,
2.3.1.86: a (3R)-3-hydroxybutanoyl-[acp] + NADP+ ← an acetoacetyl-[acp] + NADPH + H+,
2.3.1.41: a butyryl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-hexanoyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.86: a (3R)-3-hydroxyhexanoyl-[acp] + NADP+ ← a 3-oxo-hexanoyl-[acp] + NADPH + H+,
2.3.1.86/4.2.1.59: a (3R)-3-hydroxyhexanoyl-[acp] → a trans hex-2-enoyl-[acp] + H2O,
2.3.1.86: a (3R)-3-hydroxyoctanoyl-[acp] + NADP+ ← a 3-oxo-octanoyl-[acp] + NADPH + H+,
2.3.1.41: a hexanoyl-[acyl-carrier-protein] + a malonyl-[acp] + H+ → a 3-oxo-octanoyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.86: a (3R)-3-hydroxydecanoyl-[acp] + NADP+ ← a 3-oxo-decanoyl-[acp] + NADPH + H+,
2.3.1.41: an octanoyl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-decanoyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.86: a (3R)-3-hydroxydodecanoyl-[acp] + NADP+ ← a 3-oxo-dodecanoyl-[acp] + NADPH + H+,
2.3.1.41: a decanoyl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-dodecanoyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.86: a dodecanoyl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-myristoyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.86/4.2.1.59: a (3R)-3-hydroxydodecanoyl-[acp] → a (2E)-dodec-2-enoyl-[acp] + H2O,
2.3.1.86: a (3R)-3-hydroxymyristoyl-[acp] + NADP+ ← a 3-oxo-myristoyl-[acp] + NADPH + H+,
2.3.1.86/4.2.1.59: a (3R)-3-hydroxymyristoyl-[acp] → a trans tetradec-2-enoyl-[acp] + H2O,
2.3.1.86: a (3R)-3-hydroxypalmitoyl-[acp] + NADP+ ← a 3-oxo-palmitoyl-[acp] + NADPH + H+,
2.3.1.41: a myristoyl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-palmitoyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.86/4.2.1.59: a (3R)-3-hydroxydecanoyl-[acp] → a (2E)-dec-2-enoyl-[acp] + H2O,
2.3.1.128: a ribosomal protein-L-alanine + acetyl-CoA → a ribosomal protein-N-acetyl-L-alanine + coenzyme A,
2.3.1.129: a (3R)-3-hydroxymyristoyl-[acp] + UDP-N-acetyl-α-D-glucosamine → UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine + a holo-[acyl-carrier protein],
2.3.1.179: a palmitoleoyl-[acp] + a malonyl-[acp] + H+ → a 3-oxo-cis-vacc-11-enoyl-[acp] + CO2 + a holo-[acyl-carrier protein],
2.3.1.180: acetyl-CoA + a malonyl-[acp] + H+ → an acetoacetyl-[acp] + CO2 + coenzyme A,
2.3.1.181: an octanoyl-[acp] + a [lipoyl-carrier protein]-L-lysine → a [lipoyl-carrier protein] N6-octanoyl-L-lysine + a holo-[acyl-carrier protein] + H+,
2.3.1.191: a (3R)-3-hydroxymyristoyl-[acp] + UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine → UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine + a holo-[acyl-carrier protein] + H+,
2.3.1.241: a dodecanoyl-[acp] + α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA → α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA + a holo-[acyl-carrier protein],
2.3.1.242: a palmitoleoyl-[acp] + α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA → Kdo2-(palmitoleoyl)-lipid IVA + a holo-[acyl-carrier protein],
2.3.1.243: a myristoyl-[acp] + α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA → α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A + a holo-[acyl-carrier protein],
2.3.1.-: 50S ribosomal subunit protein L12 + acetyl-CoA → 50S ribosomal subunit protein L7 + coenzyme A,
2.3.1.-: a myristoyl-[acp] + Kdo2-(palmitoleoyl)-lipid IVA → (Kdo)2-lipid A, cold adapted + a holo-[acyl-carrier protein],
2.3.1.-: a malonyl-[acp] + H+ → an acetyl-[acp] + CO2,
2.3.2.2: a 5-L-glutamyl-[peptide][periplasm] + an amino acid[periplasm] = a 5-L-glutamyl-amino acid[periplasm] + a peptide[periplasm],
2.5.1.-: 2,3-dihydroxybenzoyl adenylate + a holo-[EntB isochorismatase/aryl-carrier protein] → a 2,3-dihydroxybenzoyl-[EntB isochorismatase/aryl-carrier protein] + AMP + H+,
2.7.1.69: a [PTS enzyme I]-Nπ-phospho-L-histidine + a sugar[periplasm] → a [PTS enzyme I]-L-histidine + a sugar phosphate[cytosol],
2.7.3.9: phosphoenolpyruvate + PtsI = pyruvate + PtsI-Phis189,
2.7.3.9: phosphoenolpyruvate + a [PTS enzyme I]-L-histidine → pyruvate + a [PTS enzyme I]-Nπ-phospho-L-histidine,
2.7.3.9: phosphoenolpyruvate + PtsP = pyruvate + PtsP-phosphorylated,
2.7.7.42: a [glutamine-synthetase]-L-tyrosine + ATP → a [glutamine synthetase]-O4-(5'-adenylyl)-L-tyrosine + diphosphate,
2.7.7.59: GlnK + UTP → uridylyl-[GlnK] + diphosphate,
2.7.7.59: a PII protein + UTP → a uridylylated PII protein + diphosphate,
2.7.7.61: 2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA + [a citrate-lyase acyl-carrier protein] → [a holo citrate lyase acyl-carrier protein] + diphosphate + H+,
2.7.7.73: a ThiS sulfur-carrier protein + ATP + H+ → a carboxy-adenylated-[ThiS sulfur-carrier protein] + diphosphate,
2.7.7.80: a small subunit of molybdopterin synthase + ATP + H+ → a carboxy-adenylated small subunit of molybdopterin synthase + diphosphate,
2.7.7.89: a [glutamine synthetase]-O4-(5'-adenylyl)-L-tyrosine + phosphate → a [glutamine-synthetase]-L-tyrosine + ADP,
2.7.8.7: [EntB aryl-carrier protein] + coenzyme A → a holo-[EntB isochorismatase/aryl-carrier protein] + adenosine 3',5'-bisphosphate + H+,
2.7.8.7: [EntF peptidyl-carrier protein] + coenzyme A → a holo-[EntF peptidyl-carrier protein] + adenosine 3',5'-bisphosphate + H+,
2.7.8.7: an acyl-carrier protein + coenzyme A → adenosine 3',5'-bisphosphate + a holo-[acyl-carrier protein] + H+,
2.7.11.5: an isocitrate dehydrogenase + ATP ↔ ADP + a phosphorylated isocitrate dehydrogenase,
2.7.11.21/2.7.11.22: a [protein]-(L-serine/L-threonine) + ATP → a [protein] (L-serine/L-threonine) phosphate + ADP + H+,
2.7.11.-: serine/threonine kinase HipA + ATP → phosphorylated serine/threonine kinase HipA + ADP,
2.8.1.7: a ThiI sulfur-carrier protein + L-cysteine = an S-sulfanyl-[ThiI sulfur-carrier protein] + L-alanine,
2.8.1.8: a [lipoyl-carrier protein] N6-octanoyl-L-lysine + 2 S-adenosyl-L-methionine + 2 a sulfurated [sulfur carrier] + 2 a reduced [2Fe-2S] ferredoxin → a [lipoyl-carrier protein]-N6-lipoyl-L-lysine + 2 5'-deoxyadenosine + 2 L-methionine + 2 an unsulfurated [sulfur carrier] + 2 an oxidized [2Fe-2S] ferredoxin,
2.8.1.10: 1-deoxy-D-xylulose 5-phosphate + 2-iminoacetate + a thiocarboxy-[ThiS-Protein] → 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate + a ThiS sulfur-carrier protein + 2 H2O,
2.8.1.11: a carboxy-adenylated small subunit of molybdopterin synthase + an [L-cysteine desulfurase] L-cysteine persulfide + an reduced unknown electron acceptor → a thiocarboxylated small subunit of molybdopterin synthase + an [L-cysteine desulfurase]-L-cysteine + AMP + an oxidized unknown electron acceptor + H+,
2.8.1.-: a reduced thioredoxin + thiosulfate = an oxidized thioredoxin + sulfite + hydrogen sulfide + H+,
2.8.1.-: an S-sulfanyl-[ThiI sulfur-carrier protein] + a carboxy-adenylated-[ThiS sulfur-carrier protein] + 2 a reduced ferredoxin [iron-sulfur] cluster → a thiocarboxy-[ThiS-Protein] + a ThiI sulfur-carrier protein + AMP + 2 an oxidized ferredoxin [iron-sulfur] cluster,
2.8.3.10: citrate + an acetyl-[holo citrate lyase acyl-carrier protein] + H+ → a citryl-[holo citrate lyase acyl-carrier protein] + acetate,
2.8.4.4: a [ribosomal protein S12] L-aspartate89 + 2 S-adenosyl-L-methionine + a sulfurated [sulfur carrier] + an reduced unknown electron acceptor → a [ribosomal protein S12] 3-methylthio-L-aspartate89 + S-adenosyl-L-homocysteine + an unsulfurated [sulfur carrier] + L-methionine + 5'-deoxyadenosine + an oxidized unknown electron acceptor + 2 H+,
3.1.1.61: a [protein]-L-glutamate-O5-methyl-ester + H2O → a [protein]-α-L-glutamate + methanol + H+,
3.1.1.85: a pimeloyl-[acp] methyl ester + H2O → a pimeloyl-[acp] + methanol + H+,
3.1.1.-: Tsrglu-Me + H2O → methanol + Tsrglu,
3.1.1.-: Trgglu-Me + H2O → methanol + Trgglu,
3.1.1.-: Targlu-Me + H2O → methanol + Targlu,
3.1.1.-: Tapglu-Me + H2O → methanol + Tapglu,
3.1.2.14: a palmitoleoyl-[acp][periplasm] + H2O[periplasm] → palmitoleate[periplasm] + a holo-[acyl-carrier protein][periplasm] + H+[periplasm],
3.1.2.14: a cis-vaccenoyl-[acp][periplasm] + H2O[periplasm]cis-vaccenate[periplasm] + a holo-[acyl-carrier protein][periplasm] + H+[periplasm],
3.1.3.16: a [protein] (L-serine/L-threonine) phosphate + H2O → a [protein]-(L-serine/L-threonine) + phosphate,
3.1.3.48: a [protein]-L-tyrosine phosphate + H2O → a [protein]-L-tyrosine + phosphate,
3.1.3.-: ArcB-Phis717 + H2O → ArcB + phosphate,
3.1.3.-: a phosphorylated isocitrate dehydrogenase + H2O → an isocitrate dehydrogenase + phosphate,
3.1.4.14: a holo-[acyl-carrier protein] + H2O → 4'-phosphopantetheine + an acyl-carrier protein + H+,
3.4.11.1: a peptide with an N-terminal X-L-proline + H2O → a standard α amino acid + a peptide with an N-terminal L-proline + H+,
3.4.11.23: a protein + H2O → a standard α amino acid + a peptide,
3.5.1.44: a [protein]-L-glutamine + H2O → a [protein]-α-L-glutamate + ammonium,
3.5.1.-: Tsrgln + H2O → ammonia + Tsrglu,
3.5.1.-: Trggln + H2O → ammonia + Trgglu,
3.5.1.-: Targln + H2O → ammonia + Targlu,
3.5.1.-: Tapgln + H2O → ammonia + Tapglu,
3.6.4.-: a [chaperone-ADP]-[disordered-form scaffold protein] complex + ATP → an [Fe-S cluster biosynthesis chaperone]-ATP + a [disordered-form [Fe-S] cluster scaffold protein] + ADP,
4.1.3.34: a citryl-[holo citrate lyase acyl-carrier protein] → oxaloacetate + an acetyl-[holo citrate lyase acyl-carrier protein] + H+,
4.2.1.59: a (3R)-3-hydroxy cis Δ7-tetradecenoyl-[acp] → a trans3-cis7-tetradecenoyl-[acp] + H2O,
4.2.1.59: a (3R)-3-hydroxy cis Δ9-hexadecenoyl-[acp] → a trans3-cis9-hexadecenoyl-[acp] + H2O,
4.2.1.59: a (3R)-3-hydroxyglutaryl-[acp] methyl ester → an enoylglutaryl-[acp] methyl ester + H2O,
4.2.1.59: a (3R)-3-hydroxypimeloyl-[acp] methyl ester → an enoylpimeloyl-[acp] methyl ester + H2O,
4.2.1.59: (R)-3-hydroxy-cis-vacc-11-enoyl-[acp] → a (2-trans-11-cis)-vaccen-2-enoyl-[acp] + H2O,
4.2.1.59: a (3R,5Z)-3-hydroxy-dodec-5-enoyl-[acp] → a (3E,5Z)-dodeca-3,5-dienoyl-[acp] + H2O,
6.1.2.-: carbamoyl phosphate + HypE + ATP + H2O → a HypE hydrogenase maturation protein-S-carboxamide + AMP + diphosphate + phosphate,
6.2.1.22: [a holo citrate lyase acyl-carrier protein] + acetate + ATP → an acetyl-[holo citrate lyase acyl-carrier protein] + AMP + diphosphate,
6.2.1.-: ATP + a holo-[acyl-carrier protein] + a fatty acid → AMP + a 2,3,4-saturated fatty acyl-[acp] + diphosphate,
6.2.1.-: octanoate + a holo-[acyl-carrier protein] + ATP → an octanoyl-[acp] + AMP + diphosphate,
6.3.1.-: a [lipoyl-carrier protein]-L-lysine + octanoate + ATP → a [lipoyl-carrier protein] N6-octanoyl-L-lysine + AMP + diphosphate + H+,
6.3.1.-: [glycine cleavage system lipoyl-carrier protein]-L-lysine + ATP + (R)-lipoate → AMP + a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine + diphosphate + H+,
6.3.1.-: a [lipoyl-carrier protein]-L-lysine + ATP + (R)-lipoate = a [lipoyl-carrier protein]-N6-lipoyl-L-lysine + AMP + diphosphate + H+,
6.3.4.14: a biotinylated [BCCP dimer] + hydrogen carbonate + ATP → a carboxylated-biotinylated [BCCP dimer] + ADP + phosphate + H+,
6.3.4.15: a [biotin-carboxyl-carrier protein monomer] + biotin + ATP → AMP + a biotinylated [BCCP monomer] + diphosphate + H+,
6.4.1.2: ATP + acetyl-CoA + a carboxylated-biotinylated [BCCP dimer] + H2O → malonyl-CoA + a biotinylated [BCCP dimer] + ADP + phosphate + H+,
uridylyl-[protein PII] → PII + UMP,
β-D-glucose 6-phosphate + UhpC = UhpC-glucose-6-P,
UhpB + ATP → UhpB-Phis + ADP,
methyl α-D-glucoside[periplasm] + HPr-Phis15 → HPr + methyl α-D-glucoside 6-phosphate[cytosol],
D-fructose[periplasm] + PtsI-Phis189 → D-fructose 1-phosphate[cytosol] + PtsI,
trimethylamine N-oxide + periplasmic sensory protein associated with the TorRS two-component regulatory system = TorT-TMAO,
an oxidized thioredoxin + an reduced unknown electron acceptor ← a reduced thioredoxin + an oxidized unknown electron acceptor,
ThiS-COAMP + L-cysteine = ThiS-COSH + L-alanine + AMP,
ThiS protein + ATP = ThiS-COAMP + diphosphate,
uridylyl-[GlnK] → UMP + GlnK,
YedW DNA-binding response regulator in two-component system with YedV + phosphate = YedW-Phosphorylated DNA-binding transcripcional dual regulator,
2,3-dihydroxybenzoyl-EntB + H2O → holo-EntB dimer + 2,3-dihydroxybenzoate,
YehU + ATP → YehU-Phis382 + ADP,
BglG + HPr-Phis15 = HPr + BglG-Phis208,
regulator of RpoS + ArcB-Phis717 → RssB-P + ArcB,
YpdA + ATP → YpdA-Phis371 + ADP,
RcsB-P + phosphate = RcsB-P-phosphate,
BarA-Phis302[inner membrane] → BarA-Pasp718[inner membrane],
BarA-Pasp718[inner membrane] → BarA-Phis816[inner membrane],
CheY + CheA-P → CheY-Pasp + CheA,
CheA + ATP → CheA-P + ADP,
NtrB-Phis + NtrC → NtrB sensory histidine kinase + NtrC-Pasp,
TorS sensory histidine kinase - his850 phosphorylated + TorR → TorS sensory histidine kinase + TorR-Pasp,
RcsC-Phis[inner membrane] → RcsC-Pasp[inner membrane],
EnvZ-Phis + OmpR → EnvZ sensory histidine kinase + OmpR-P,
KdpD sensory histidine kinase - phosphorylated + KdpE → KdpE-Pasp + KdpD,
UhpA + UhpB-Phis → UhpA-Pasp + UhpB,
EvgS-Pasp[inner membrane] → EvgS-Phis1137[inner membrane],
CusS sensory histidine kinase - phosphorylated + CusR → CusS + CusR-Pasp51,
CheY-ac + NAD+ + H2O → CheY + 3''-O-acetyl-ADP-ribose + nicotinamide,
N6-L-threonylcarbamoyladenine synthase, TsaD subunit → TsaD degradation products,
a non-methylated ribosomal protein L11 + S-adenosyl-L-methionine → a methylated ribosomal protein L11 + S-adenosyl-L-homocysteine,
murein lipoprotein[periplasm] + a peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide[periplasm] → D-alanine[periplasm] + peptidoglycan tripeptide-Lpp crosslink[periplasm],
QseB + QseC sensory histidine kinase - phosphorylated → QseB-Pasp51 + QseC,
D-allose + AlsR = AlsR-allose,
regulator of RpoS + acetyl phosphate = RssB-P + acetate,
UvrY + BarA-Phis816 → UvrY-Pasp54 + BarA,
a prolipoprotein + an L-1-phosphatidyl-glycerol = a diacylglycerol prolipoprotein + sn-glycerol 1-phosphate,
ATP + SucB + (R)-lipoate → AMP + SucB-lipoate + diphosphate,
ATP + AceF + (R)-lipoate → AMP + AceF-lipoate + diphosphate,
[glycine cleavage system lipoyl-carrier protein]-L-lysine + a lipoyl-[acp] = a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine + a holo-[acyl-carrier protein] + H+,
a ThiS-ThiI acyl-disulfide + a ThiF protein = a ThiS-ThiF acyl-disulfide + a ThiI sulfur-carrier protein,
lipoyl-adenylate + a [lipoyl-carrier protein]-L-lysine → a [lipoyl-carrier protein]-N6-lipoyl-L-lysine + AMP + 2 H+,
2 a biotinylated [BCCP monomer] → a biotinylated [BCCP dimer],
a uridylylated PII protein + H2O → a PII protein + UMP,
O-carbamoyladenylate + HypE = a HypE hydrogenase maturation protein-S-carboxamide + AMP,
a 2,3-dihydroxybenzoyl-[EntB isochorismatase/aryl-carrier protein] + a seryl-[EntF peptidyl-carrier protein] → a holo-[EntB isochorismatase/aryl-carrier protein] + a DHB-seryl-[EntF peptidyl-carrier protein] + H+,
a holo-[EntF peptidyl-carrier protein] + L-seryl-adenylate → a seryl-[EntF peptidyl-carrier protein] + AMP + H+,
a [protein]-Nπ-phospho-L-histidine + 2/3-phospho-D-glycerate = a [protein]-L-histidine + 2,3-diphospho-D-glycerate,
a [protein]-L-histidine + 2,3-diphospho-D-glycerate = a [protein]-Nπ-phospho-L-histidine + 3-phospho-D-glycerate,
a [protein]-Nπ-phospho-L-histidine + 2-phospho-D-glycerate = a [protein]-L-histidine + 2,3-diphospho-D-glycerate,
a [protein]-L-histidine + 2,3-diphospho-D-glycerate = a [protein]-Nπ-phospho-L-histidine + 2/3-phospho-D-glycerate,
a reduced thioredoxin + D-cystine → an oxidized thioredoxin + 2 D-cysteine,
a reduced thioredoxin + L-cystine → an oxidized thioredoxin + 2 L-cysteine,
an S-sulfanyl-[L-cysteine desulfurase] + a [disordered-form [Fe-S] cluster scaffold protein] = an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex,
lipoyl-adenylate + [glycine cleavage system lipoyl-carrier protein]-L-lysine = a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine + AMP + 2 H+,
RstB + ATP → RstB sensory histidine kinase - phosphorylated + ADP,
RstA + RstB sensory histidine kinase - phosphorylated → RstA-Pasp52 + RstB,
a reduced flavodoxin + a ribonucleoside triphosphate = an oxidized flavodoxin + a deoxyribonucleoside triphosphate + H2O,
an iron-sulfur protein + 2 e- = a reduced iron-sulfur protein,
ATP + RcsC → ADP + RcsC-Phis,
ATP + PhoQ sensory histidine kinase → ADP + PhoQ sensory histidine kinase - phosphorylated,
PhoP + PhoQ sensory histidine kinase - phosphorylated → PhoP-Pasp51 + PhoQ sensory histidine kinase,
PhoB + PhoR sensory histidine kinase - phosphorylated → PhoR + PhoB-Pasp53,
CreC sensory histidine kinase - phosphorylated + PhoB = CreC + PhoB-Pasp53,
NtrB-Phis + NtrC → NtrB + NtrC-Pasp,
ATP + NtrB → ADP + NtrB-Phis,
NtrC-Pasp + H2O → NtrC + phosphate,
ATP + NarX → ADP + NarX sensory histidine kinase - phosphorylated,
ATP + NarQ → ADP + NarQ sensory histidine kinase - phosphorylated,
NarX sensory histidine kinase - phosphorylated + NarP → NarX + NarP-Pasp59,
NarQ sensory histidine kinase - phosphorylated + NarP → NarQ + NarP-Pasp59,
NarX sensory histidine kinase - phosphorylated + NarL → NarX + NarL-Pasp59,
NarQ sensory histidine kinase - phosphorylated + NarL → NarQ + NarL-Pasp59,
ZraS + ATP → ZraS-Phis254 + ADP,
ZraR + ZraS-Phis254 → ZraR-Pasp56 + ZraS,
an oxidized glutaredoxin + 2 e- = a reduced glutaredoxin,
an oxidized flavoprotein (FMN) + NAD(P)H + 2 H+ → a reduced flavoprotein (FMNH2) + NAD(P)+,
a reduced flavoprotein (FMNH2) + an iron-sulfur protein → an oxidized flavoprotein (FMN) + a reduced iron-sulfur protein + 2 H+,
an oxidized flavoprotein (FAD) + NAD(P)H + 2 H+ → a reduced flavoprotein (FADH2) + NAD(P)+,
a reduced flavoprotein (FADH2) + an oxidized iron-sulfur protein → an oxidized flavoprotein (FAD) + a reduced iron-sulfur protein + 2 H+,
EvgA + EvgS-Phis1137 → EvgS + EvgA-Pasp,
EnvZ sensory histidine kinase + ATP → ADP + EnvZ-Phis,
apo-serine activating enzyme + coenzyme A → adenosine 3',5'-bisphosphate + holo [EntF peptidyl-carrier protein],
a reduced b-type cytochrome + an oxidized d-type cytochrome → an oxidized b-type cytochrome + a reduced d-type cytochrome,
a reduced d-type cytochrome + 2 H+ + oxygen → a d-type cytochrome + H2O,
a reduced b-type cytochrome + an oxidized unknown electron acceptor → an oxidized b-type cytochrome + an reduced unknown electron acceptor,
CreC sensory histidine kinase - phosphorylated + CreB → CreB-Pasp54 + CreC,
CpxR + CpxA sensory histidine kinase - phosphorylated → b3912 + CpxA,
CpxA + ATP → CpxA sensory histidine kinase - phosphorylated + ADP,
CheB-Pasp + H2O = CheB + phosphate,
BasS sensory histidine kinase - phosphorylated + BasR → BasS + BasR-Pasp51,
OmpR + BarA-Phis816 = OmpR-P + BarA,
BaeR + BaeS sensory histidine kinase - phosphorylated → BaeR-Pasp61 + BaeS,
AtoS-P + AtoC → AtoS monomer + AtoC-P,
ArcB + ATP → ArcB-Phis292 + ADP,
ArcB-Phis292 + ArcA → ArcA-Pasp54 + ArcB,
ArcA + ArcB-Phis717 → ArcA-Pasp54 + ArcB,
ATP + Peptide[periplasm] + H2O → ADP + Peptide[cytosol] + phosphate,
DsbAoxidised[periplasm] + 2 D-cysteine[periplasm] = D-cystine[periplasm] + DsbAreduced[periplasm],
DsbAoxidised[periplasm] + 2 L-cysteine[periplasm] = L-cystine[periplasm] + DsbAreduced[periplasm],
a diacylglycerol prolipoprotein[periplasm] + a phospholipid[periplasm] = murein lipoprotein[periplasm] + a lyso-phospholipid[periplasm],
ATP + NtrB sensory histidine kinase → ADP + NtrB-Phis,
protein chain elongation factor EF-P + (R)-β-lysine + ATP = protein chain elongation factor EF-P, β-lysyl-Lys34 + AMP + diphosphate,
ATP + TorS sensory histidine kinase → ADP + TorS sensory histidine kinase - his443 phosphorylated,
AtoS monomer + ATP → AtoS-P + ADP,
EvgS + ATP → EvgS-Phis721 + ADP,
CusS + ATP → CusS sensory histidine kinase - phosphorylated + ADP,
QseC + ATP → QseC sensory histidine kinase - phosphorylated + ADP,
GlrK + ATP → GlrK sensory histidine kinase - phosphorylated + ADP,
ATP + DpiB → ADP + DpiB sensory histidine kinase - phosphorylated,
cyclic pyranopterin phosphate + MoaD-S = molybdopterin synthase small subunit + molybdopterin,
L-ascorbate + 2 an oxidized c-type cytochrome → L-dehydro-ascorbate + 2 a reduced c-type cytochrome + H+,
a reduced hydrogenase 3 + H+ ↔ an oxidized hydrogenase 3 + H2,
formate + an oxidized hydrogenase 3 = CO2 + a reduced hydrogenase 3,
PhoR + ATP → ADP + PhoR sensory histidine kinase - phosphorylated,
ATP + KdpD → KdpD sensory histidine kinase - phosphorylated + ADP,
ATP + CreC → ADP + CreC sensory histidine kinase - phosphorylated,
CheY-Pasp + H2O → CheY + phosphate,
ATP + BasS → ADP + BasS sensory histidine kinase - phosphorylated,
BarA + ATP → BarA-Phis302 + ADP,
BaeS + ATP → BaeS sensory histidine kinase - phosphorylated + ADP


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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
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