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Escherichia coli K-12 substr. MG1655 Class: Superpathways

Pathways within this class are constructed by combining individual pathways (elsewhere shown separately) to show relationships between them. In some cases those individual pathways start from a common precursor, or produce a common product, but they can have other relationships as well. Superpathways can have individual reactions as their components in addition to other pathways. Superpathways can be defined recursively, that is, the component pathway of a Superpathway can be a base pathway or a child of Superpathways. Most Superpathways will have an additional parent class within the pathway ontology to define their biological role.

Parent Classes:

3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation,
O-antigen building blocks biosynthesis (E. coli),
S-adenosyl-L-methionine cycle I,
allantoin degradation IV (anaerobic),
allantoin degradation to glyoxylate III,
ammonia assimilation cycle III,
aspartate superpathway,
biotin biosynthesis I,
chorismate biosynthesis I,
colanic acid building blocks biosynthesis,
enterobacterial common antigen biosynthesis,
enterobactin biosynthesis,
glycerol and glycerophosphodiester degradation,
ketogluconate metabolism,
L-arginine biosynthesis I (via L-ornithine),
L-glutamate degradation IX (via 4-aminobutanoate),
L-homoserine and L-methionine biosynthesis,
methylglyoxal degradation IV,
NAD salvage pathway II,
pantothenate and coenzyme A biosynthesis I,
pentose phosphate pathway,
peptidoglycan biosynthesis I (meso-diaminopimelate containing),
polyisoprenoid biosynthesis (E. coli),
pyrimidine nucleobases salvage II,
sulfate reduction I (assimilatory),
superpathway of β-D-glucuronide and D-glucuronate degradation,
superpathway of (Kdo)2-lipid A biosynthesis,
superpathway of 4-aminobutanoate degradation,
superpathway of 5-aminoimidazole ribonucleotide biosynthesis,
superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation,
superpathway of S-adenosyl-L-methionine biosynthesis,
superpathway of acetate utilization and formation,
superpathway of adenosine nucleotides de novo biosynthesis II,
superpathway of arginine and polyamine biosynthesis,
superpathway of aromatic amino acid biosynthesis,
superpathway of branched amino acid biosynthesis,
superpathway of chorismate metabolism,
superpathway of D-glucarate and D-galactarate degradation,
superpathway of fatty acid biosynthesis I (E. coli),
superpathway of fatty acid biosynthesis initiation (E. coli),
superpathway of fucose and rhamnose degradation,
superpathway of glycol metabolism and degradation,
superpathway of glycolysis and Entner-Doudoroff,
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass,
superpathway of glyoxylate bypass and TCA,
superpathway of guanine and guanosine salvage,
superpathway of guanosine nucleotides de novo biosynthesis II,
superpathway of heme biosynthesis from uroporphyrinogen-III,
superpathway of hexitol degradation (bacteria),
superpathway of hexuronide and hexuronate degradation,
superpathway of histidine, purine, and pyrimidine biosynthesis,
superpathway of L-alanine biosynthesis,
superpathway of L-arginine and L-ornithine degradation,
superpathway of L-arginine, putrescine, and 4-aminobutanoate degradation,
superpathway of L-asparagine biosynthesis,
superpathway of L-aspartate and L-asparagine biosynthesis,
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I,
superpathway of L-serine and glycine biosynthesis I,
superpathway of L-threonine biosynthesis,
superpathway of L-threonine metabolism,
superpathway of lipopolysaccharide biosynthesis,
superpathway of menaquinol-8 biosynthesis I,
superpathway of methylglyoxal degradation,
superpathway of ornithine degradation,
superpathway of phenylethylamine degradation,
superpathway of phospholipid biosynthesis I (bacteria),
superpathway of polyamine biosynthesis I,
superpathway of purine deoxyribonucleosides degradation,
superpathway of purine nucleotides de novo biosynthesis II,
superpathway of pyridoxal 5'-phosphate biosynthesis and salvage,
superpathway of pyrimidine deoxyribonucleosides degradation,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli),
superpathway of pyrimidine nucleobases salvage,
superpathway of pyrimidine ribonucleosides salvage,
superpathway of pyrimidine ribonucleotides de novo biosynthesis,
superpathway of sulfate assimilation and cysteine biosynthesis,
superpathway of tetrahydrofolate biosynthesis,
superpathway of thiamine diphosphate biosynthesis I,
superpathway of ubiquinol-8 biosynthesis (prokaryotic),
superpathway of unsaturated fatty acids biosynthesis (E. coli),
thiamine salvage II

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Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 19.5 on Sat Apr 30, 2016, BIOCYC11A.