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discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
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for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
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Escherichia coli K-12 substr. MG1655 Reactions Class: tRNA-Reactions

Summary:
Reactions in which at least one substrate is a tRNA or a modified tRNA.

Parent Classes:
RNA-Reactions

Child classes:
tRNA-Charging-Reactions (21)

Instances:
1.1.1.-: a 5,6-dihydrouridine in tRNA + NADP+ ← a uridine in tRNA + NADPH + H+ ,
1.2.1.70: glutamate-1-semialdehyde + tRNAGlu + NADP+ ← L-glutamyl-tRNAGlu + NADPH ,
1.17.99.-: a queuosine34 in tRNA + an oxidized electron acceptor + H2O ← an epoxyqueuosine34 in tRNA + a reduced electron acceptor ,
2.1.1.33: guanine46 in tRNA + S-adenosyl-L-methionine → N7-methylguanine46 in tRNA + S-adenosyl-L-homocysteine ,
2.1.1.34: a guanosine18 in tRNA + S-adenosyl-L-methionine → a 2'-O-methylguanosine18 in tRNA + S-adenosyl-L-homocysteine + H+ ,
2.1.1.35: a uracil54 in tRNA + S-adenosyl-L-methionine → a 5-methyluracil54 in tRNA + S-adenosyl-L-homocysteine + H+ ,
2.1.1.61: a tRNA containing 5-aminomethyl-2-thiouridine + S-adenosyl-L-methionine → S-adenosyl-L-homocysteine + a 5-methylaminomethyl-2-thiouridine in tRNA + 2 H+ ,
2.1.1.200: a cytidine 32 in tRNA + S-adenosyl-L-methionine → a 2'-O-methylcytidine32 in tRNA + S-adenosyl-L-homocysteine + H+ ,
2.1.1.200: a uridine32 in tRNA + S-adenosyl-L-methionine → a 2'-O-methyluridine32 in tRNA + S-adenosyl-L-homocysteine + H+ ,
2.1.1.207: a cytidine34 in tRNA + S-adenosyl-L-methionine → a 2'-O-methylcytidine34 in tRNA + S-adenosyl-L-homocysteine + H+ ,
2.1.1.207: a 5-carboxymethylaminomethyluridine34 in tRNALeu + S-adenosyl-L-methionine → a 5-carboxymethylaminomethyl-2'-O-methyluridine34 in tRNALeu + S-adenosyl-L-homocysteine + H+ ,
2.1.1.223: S-adenosyl-L-methionine + adenine37 in tRNA1valS-adenosyl-L-homocysteine + N6-methyladenine37 in tRNA1val + H+ ,
2.1.1.228: guanine37 in tRNA + S-adenosyl-L-methionine → N1-methylguanine37 in tRNA + S-adenosyl-L-homocysteine + H+ ,
2.1.2.9: an N10-formyl-tetrahydrofolate + L-methionyl-tRNAfmet → a tetrahydrofolate + N-formyl-L-methionyl-tRNAfmet ,
2.3.1.193: a cytidine34 in tRNAmet + ATP + acetyl-CoA + H2O → [elongator tRNAmet]-N4-acetylcytidine34 + ADP + coenzyme A + phosphate + H+ ,
2.3.2.6: L-leucyl-tRNAleu + a protein = tRNAleu + L-leucyl-[protein] + H+ ,
2.4.1.-: queuosine at position 34 of a tRNAAsp + ATP + L-glutamate → glutamyl-queuosine at position 34 of a tRNAAsp + AMP + diphosphate + 2 H+ ,
2.4.2.29: a guanine34 in tRNA + preQ1 → a 7-aminomethyl-7-deazaguanosine34 in tRNA + guanine ,
2.4.99.17: a 7-aminomethyl-7-deazaguanosine34 in tRNA + S-adenosyl-L-methionine → an epoxyqueuosine34 in tRNA + adenine + L-methionine + 2 H+ ,
2.5.1.75: dimethylallyl diphosphate + an adenosine37 in tRNA = N6-dimethylallyladenosine37 in tRNA + diphosphate ,
2.7.7.56: a tRNA precursor with a short 3' extension + n phosphate → an uncharged tRNA + n a ribonucleoside diphosphate ,
2.7.7.56: RNA(n+1) + phosphate = RNA(n) + a nucleoside diphosphate ,
2.7.7.72: a tRNA precursor + 2 CTP + ATP → a tRNA containing a 3' CCA end + 3 diphosphate ,
2.8.1.4: 'activated' tRNA + L-cysteine = L-serine + tRNA containing a thionucleotide ,
2.9.1.1: selenophosphate + L-seryl-tRNAsec → L-selenocysteinyl-tRNAsec + phosphate + H+ ,
3.1.1.29: an N-modified aminoacyl-tRNA + H2O → a tRNA + an N-modified amino acid + 2 H+ ,
3.1.1.96: a D-aminoacyl-tRNA + H2O → a D-amino acid + a tRNA + 2 H+ ,
3.1.13.1: mutated tRNA + n H2O → n a nucleoside 5'-monophosphate ,
3.1.13.5: a tRNA precursor + H2O → a tRNA + a nucleoside 5'-monophosphate ,
3.1.13.5: a tRNA precursor with a short 3' extension → an uncharged tRNA + n a nucleoside 5'-monophosphate ,
3.1.26.5: a tRNA precursor with a 5' extension + H2O → an uncharged tRNA + a single-stranded RNA ,
3.5.4.-: an adenosine34 in [tRNAArg2] + H+ + H2O → an inosine34 in [tRNAArg2] + ammonium ,
5.4.99.12: a tRNA uridine38-40 → a pseudouridine38-40 in tRNA ,
6.3.4.19: a cytidine34 in tRNAIle2 + L-lysine + ATP → a lysidine34 in tRNAIle2 + AMP + diphosphate + 2 H+ ,
D-tyrosyl-tRNATyr + H2O = tRNAtyr + D-tyrosine


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Sun Dec 21, 2014, biocyc14.