Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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Escherichia coli K-12 substr. MG1655 Compound: D-tryptophan

Superclasses: an amino acid or its derivative an amino acid a D-amino acid an aromatic D-amino acid
an amino acid or its derivative an amino acid an aromatic amino acid an aromatic D-amino acid

Chemical Formula: C11H12N2O2

Molecular Weight: 204.23 Daltons

Monoisotopic Molecular Weight: 204.0898776398 Daltons

SMILES: C2(NC1(C=CC=CC=1C(CC([N+])C(=O)[O-])=2))

InChI: InChI=1S/C11H12N2O2/c12-9(11(14)15)5-7-6-13-10-4-2-1-3-8(7)10/h1-4,6,9,13H,5,12H2,(H,14,15)/t9-/m1/s1

InChIKey: InChIKey=QIVBCDIJIAJPQS-SECBINFHSA-N

Unification Links: CAS:153-94-6 , ChEBI:57719 , HMDB:HMDB13609 , KEGG:C00525 , MetaboLights:MTBLC57719 , NCI:97942 , PubChem:6923517

Standard Gibbs Free Energy of Change Formation (ΔfG in kcal/mol): -46.869

Reactions known to consume the compound:

Not in pathways:
a D-amino acid + an electron-transfer-related quinone[inner membrane] + H2O → ammonium + a 2-oxo carboxylate + an electron-transfer-related quinol[inner membrane]

Reactions known to produce the compound:

Not in pathways:
a D-aminoacyl-tRNA + H2O → a D-amino acid + a tRNA + 2 H+

Reactions known to both consume and produce the compound:

Not in pathways:
an aromatic amino acid + 2-oxoglutarate ↔ an aromatic oxo-acid + L-glutamate

In Reactions of unknown directionality:

Not in pathways:
a 5-L-glutamyl-[peptide][periplasmic space] + an amino acid[periplasmic space] = a 5-L-glutamyl-amino acid[periplasmic space] + a peptide[periplasmic space]

In Transport reactions:
an aromatic amino acid[cytosol]an aromatic amino acid[periplasmic space]

In Redox half-reactions:
a 2-oxo carboxylate[in] + ammonium[in] + 2 H+[in] + 2 e-a D-amino acid[in] + H2O[in]


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Sat Nov 22, 2014, BIOCYC13B.