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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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Escherichia coli K-12 substr. MG1655 Compound: dCMP

Synonyms: 2'-deoxycytidine 5'-monophosphate, deoxycytidylate, deoxycytidylic acid, deoxycytidine monophosphate, 2'-deoxycytidine 5'-phosphate, deoxycytidine-phosphate

Superclasses: a nucleic acid component a nucleotide a 2'-deoxyribonucleotide a 2'-deoxyribonucleoside 5'-monophosphate a pyrimidine 2'-deoxyribonucleoside 5'-monophosphate
a nucleic acid component a nucleotide a 2'-deoxyribonucleotide a pyrimidine 2'-deoxyribonucleotide a pyrimidine 2'-deoxyribonucleoside 5'-monophosphate
a nucleic acid component a nucleotide a nucleoside 5'-monophosphate a 2'-deoxyribonucleoside 5'-monophosphate a pyrimidine 2'-deoxyribonucleoside 5'-monophosphate
a nucleic acid component a nucleotide a pyrimidine nucleotide a pyrimidine 2'-deoxyribonucleotide a pyrimidine 2'-deoxyribonucleoside 5'-monophosphate
an organic heterocyclic compound an organonitrogen heterocyclic compound a diazine a pyrimidine a pyrimidine nucleotide a pyrimidine 2'-deoxyribonucleotide a pyrimidine 2'-deoxyribonucleoside 5'-monophosphate
an organic heterocyclic compound an organonitrogen heterocyclic compound a diazine a pyrimidine

Chemical Formula: C9H12N3O7P

Molecular Weight: 305.18 Daltons

Monoisotopic Molecular Weight: 307.05693632969997 Daltons

SMILES: C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O

InChI: InChI=1S/C9H14N3O7P/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(19-8)4-18-20(15,16)17/h1-2,5-6,8,13H,3-4H2,(H2,10,11,14)(H2,15,16,17)/p-2/t5-,6+,8+/m0/s1

InChIKey: InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L

Unification Links: CAS:1032-65-1 , ChEBI:57566 , ChemSpider:5414501 , HMDB:HMDB01202 , IAF1260:34352 , KEGG:C00239 , MetaboLights:MTBLC57566 , PubChem:7058169

Standard Gibbs Free Energy of Change Formation (ΔfG in kcal/mol): -328.31

Reactions known to consume the compound:

pyrimidine deoxyribonucleotide phosphorylation :
ATP + dCMP → ADP + dCDP

Not in pathways:
dCMP + H2O → 2'-deoxycytidine + phosphate


a 2'-deoxyribonucleoside 5'-monophosphate + H2O → a 2'-deoxynucleoside + phosphate


a nucleoside 5'-monophosphate[periplasmic space] + H2O[periplasmic space] → a nucleoside[periplasmic space] + phosphate[periplasmic space]

Reactions known to produce the compound:

pyrimidine deoxyribonucleotides dephosphorylation :
dCTP + H2O → dCMP + diphosphate + H+

Not in pathways:
DNAn + H2O → (deoxynucleotides)(n-1) + a 2'-deoxyribonucleoside 5'-monophosphate

tRNA processing :
a tRNA precursor with a 5' extension and a long 3' trailer + n H2O → a tRNA precursor with a 5' extension and a short 3' extension + n a nucleoside 5'-monophosphate
a tRNA precursor with a short 3' extension → an uncharged tRNA + n a nucleoside 5'-monophosphate


a tRNA precursor + H2O → a tRNA + a nucleoside 5'-monophosphate
RNase R degradation substrate RNA + n-1 H2O → n-2 a nucleoside 5'-monophosphate + a diribonucleotide
an oligonucleotide + H2O → n a nucleoside 5'-monophosphate
RNA + n H2O → n a nucleoside 5'-monophosphate
DNAn + n H2O → n a nucleoside 5'-monophosphate
a nucleoside diphosphate + H2O → a nucleoside 5'-monophosphate + phosphate + H+
a RNA-DNA hybrid + n H2O → DNA + n a nucleoside 5'-monophosphate
a nucleoside triphosphate + H2O → a nucleoside 5'-monophosphate + diphosphate + H+
RNase II degradation substrate mRNA + n H2O → n a nucleoside 5'-monophosphate
mutated tRNA + n H2O → n a nucleoside 5'-monophosphate
(deoxynucleotides)(n) + H2O → (deoxynucleotides)(n-1) + a nucleoside 5'-monophosphate


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Thu Nov 27, 2014, biocyc12.