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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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Escherichia coli K-12 substr. MG1655 Polypeptide: conserved protein



Gene: yeiW Accession Numbers: G0-10511 (EcoCyc), b4502, ECK2164

Regulation Summary Diagram: ?

Summary:
No information about this protein was found by a literature search conducted on April 25, 2006.

Map Position: [2,263,063 <- 2,263,317] (48.78 centisomes)
Length: 255 bp / 84 aa

Molecular Weight of Polypeptide: 8.954 kD (from nucleotide sequence)

Unification Links: ASAP:ABE-0285016 , EcoGene:EG14375 , EcoliWiki:b4502 , PortEco:yeiW , Protein Model Portal:P0AFT8 , RefSeq:YP_588461 , RegulonDB:G0-10511 , String:511145.b4502 , UniProt:P0AFT8

Relationship Links: InterPro:IN-FAMILY:IPR005358 , Pfam:IN-FAMILY:PF03692

Genetic Regulation Schematic: ?

GO Terms:

Molecular Function: GO:0005515 - protein binding Inferred from experiment [Rajagopala14]

Gene Class: ORFs Conserved-ORFs

Essentiality data for yeiW knockouts: ?

Growth Medium Growth? T (°C) O2 pH Osm/L Growth Observations
LB Lennox Yes 37 Aerobic 7   Yes [Baba06, Comment 1]
M9 medium with 1% glycerol Yes 37 Aerobic 7.2 0.35 Yes [Joyce06, Comment 2]
MOPS medium with 0.4% glucose Yes 37 Aerobic 7.2 0.22 Yes [Baba06, Comment 1]

Credits:
Created 25-Apr-2006 by Keseler I , SRI International
Last-Curated ? 25-Apr-2006 by Keseler I , SRI International


Gene Local Context (not to scale): ?

Transcription Units:

Notes:


References

Baba06: Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H (2006). "Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection." Mol Syst Biol 2;2006.0008. PMID: 16738554

Joyce06: Joyce AR, Reed JL, White A, Edwards R, Osterman A, Baba T, Mori H, Lesely SA, Palsson BO, Agarwalla S (2006). "Experimental and computational assessment of conditionally essential genes in Escherichia coli." J Bacteriol 188(23);8259-71. PMID: 17012394

Rajagopala14: Rajagopala SV, Sikorski P, Kumar A, Mosca R, Vlasblom J, Arnold R, Franca-Koh J, Pakala SB, Phanse S, Ceol A, Hauser R, Siszler G, Wuchty S, Emili A, Babu M, Aloy P, Pieper R, Uetz P (2014). "The binary protein-protein interaction landscape of Escherichia coli." Nat Biotechnol 32(3);285-90. PMID: 24561554

Other References Related to Gene Regulation

Raghavan11: Raghavan R, Sage A, Ochman H (2011). "Genome-wide identification of transcription start sites yields a novel thermosensing RNA and new cyclic AMP receptor protein-regulated genes in Escherichia coli." J Bacteriol 193(11);2871-4. PMID: 21460078


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Mon Dec 22, 2014, biocyc13.