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Escherichia coli K-12 substr. MG1655 Polypeptide: KpLE2 phage-like element; partial regulator of insertion element IS911B (interrupted)



Gene: insN-2 Accession Numbers: G7904 (EcoCyc), b4283, ECK0257

Synonyms: yi91, yi91b

Regulation Summary Diagram: ?

Summary:
No information about this protein was found by a literature search conducted on April 28, 2006.

Gene Citations: [Zaslaver06]

Locations: cytosol

Map Position: [4,505,220 -> 4,505,486] (97.1 centisomes)
Length: 267 bp / 88 aa

Molecular Weight of Polypeptide: 10.344 kD (from nucleotide sequence)

Unification Links: ASAP:ABE-0014040 , EchoBASE:EB4745 , EcoGene:EG40014 , EcoliWiki:b4283 , OU-Microarray:b4283 , PortEco:insN-2 , Pride:P39212 , Protein Model Portal:P39212 , RefSeq:NP_418703 , RegulonDB:G7904 , SMR:P39212 , UniProt:P39212

Relationship Links: EcoO157Cyc:Homolog:Z1150 , EcoO157Cyc:Homolog:Z1150-MONOMER , EcoO157Cyc:Homolog:Z1589 , EcoO157Cyc:Homolog:Z1589-MONOMER , InterPro:IN-FAMILY:IPR002514 , InterPro:IN-FAMILY:IPR009057 , Pfam:IN-FAMILY:PF01527

GO Terms:

Biological Process: GO:0006310 - DNA recombination Inferred by computational analysis [UniProtGOA11]
GO:0006313 - transposition, DNA-mediated Inferred by computational analysis [GOA01]
GO:0032196 - transposition Inferred by computational analysis [UniProtGOA11]
Molecular Function: GO:0003677 - DNA binding Inferred by computational analysis [UniProtGOA11, GOA01]
GO:0004803 - transposase activity Inferred by computational analysis [GOA01]
Cellular Component: GO:0005829 - cytosol Inferred by computational analysis [DiazMejia09]

MultiFun Terms: extrachromosomal transposon related

Essentiality data for insN-2 knockouts: ?

Growth Medium Growth? T (°C) O2 pH Osm/L Growth Observations
LB enriched Yes 37 Aerobic 6.95   Yes [Gerdes03, Comment 1]

Credits:
Last-Curated ? 28-Apr-2006 by Shearer A , SRI International


Gene Local Context (not to scale): ?

Transcription Unit:

Notes:

History:
Peter D. Karp on Wed Jan 18, 2006:
Gene left-end position adjusted based on analysis performed in the 2005 E. coli annotation update [Riley06 ].
Markus Krummenacker on Tue Oct 14, 1997:
Gene object created from Blattner lab Genbank (v. M52) entry.


References

DiazMejia09: Diaz-Mejia JJ, Babu M, Emili A (2009). "Computational and experimental approaches to chart the Escherichia coli cell-envelope-associated proteome and interactome." FEMS Microbiol Rev 33(1);66-97. PMID: 19054114

Gerdes03: Gerdes SY, Scholle MD, Campbell JW, Balazsi G, Ravasz E, Daugherty MD, Somera AL, Kyrpides NC, Anderson I, Gelfand MS, Bhattacharya A, Kapatral V, D'Souza M, Baev MV, Grechkin Y, Mseeh F, Fonstein MY, Overbeek R, Barabasi AL, Oltvai ZN, Osterman AL (2003). "Experimental determination and system level analysis of essential genes in Escherichia coli MG1655." J Bacteriol 185(19);5673-84. PMID: 13129938

GOA01: GOA, DDB, FB, MGI, ZFIN (2001). "Gene Ontology annotation through association of InterPro records with GO terms."

Riley06: Riley M, Abe T, Arnaud MB, Berlyn MK, Blattner FR, Chaudhuri RR, Glasner JD, Horiuchi T, Keseler IM, Kosuge T, Mori H, Perna NT, Plunkett G, Rudd KE, Serres MH, Thomas GH, Thomson NR, Wishart D, Wanner BL (2006). "Escherichia coli K-12: a cooperatively developed annotation snapshot--2005." Nucleic Acids Res 34(1);1-9. PMID: 16397293

UniProtGOA11: UniProt-GOA (2011). "Gene Ontology annotation based on manual assignment of UniProtKB keywords in UniProtKB/Swiss-Prot entries."

Zaslaver06: Zaslaver A, Bren A, Ronen M, Itzkovitz S, Kikoin I, Shavit S, Liebermeister W, Surette MG, Alon U (2006). "A comprehensive library of fluorescent transcriptional reporters for Escherichia coli." Nat Methods 3(8);623-8. PMID: 16862137


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Sun Nov 23, 2014, BIOCYC13B.