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Escherichia coli K-12 substr. MG1655 Curator: Ron Caspi

Email:

Affiliations: SRI International

Note: Listed below are contributions the curator has made to EcoCyc. They are sorted, with the most recent at the top.

Stats: Pathways: 182, Proteins: 302, RNAs: 12, Reactions: 207, Compounds: 1272, Misc.: 0

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Created:
sulfoglycolysis on 28-Jan-2014 ,
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) on 18-Aug-2013 ,
UDP-D-galactose biosynthesis on 15-Aug-2013 ,
UDP-glucose biosynthesis on 15-Aug-2013 ,
UDP-N-acetyl-α-D-mannosaminouronate biosynthesis on 09-Aug-2013 ,
dTDP-N-acetylthomosamine biosynthesis on 05-Aug-2013 ,
β-D-glucuronide and D-glucuronate degradation on 14-Mar-2013 ,
D-fructuronate degradation on 13-Mar-2013 ,
guanosine deoxyribonucleotides de novo biosynthesis II on 13-Feb-2013 ,
guanosine ribonucleotides de novo biosynthesis on 13-Feb-2013 ,
adenosine deoxyribonucleotides de novo biosynthesis II on 13-Feb-2013 ,
adenosine ribonucleotides de novo biosynthesis on 13-Feb-2013 ,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis on 31-Jan-2013 ,
superpathway of pyrimidine nucleobases salvage on 31-Jan-2013 ,
pyrimidine deoxyribonucleotides dephosphorylation on 30-Jan-2013 ,
CMP phosphorylation on 30-Jan-2013 ,
pyrimidine deoxyribonucleotide phosphorylation on 28-Jan-2013 ,
superpathway of pyrimidine ribonucleosides salvage on 25-Jan-2013 ,
pyrimidine ribonucleosides salvage III on 25-Jan-2013 ,
pyrimidine nucleobases salvage II on 24-Jan-2013 ,
pyrimidine ribonucleosides salvage I on 24-Jan-2013 ,
pyrimidine deoxyribonucleotides de novo biosynthesis II on 18-Jan-2013 ,
pyrimidine deoxyribonucleotides de novo biosynthesis I on 16-Jan-2013 ,
pyrimidine nucleobases salvage I on 15-Jan-2013 ,
pyrimidine deoxyribonucleosides degradation on 08-Jan-2013 ,
2'-deoxy-α-D-ribose 1-phosphate degradation on 08-Jan-2013 ,
purine deoxyribonucleosides degradation I on 08-Jan-2013 ,
UTP and CTP de novo biosynthesis on 03-Jan-2013 ,
L-ascorbate degradation II (bacterial, aerobic) on 02-Dec-2011 ,
glycerophosphodiester degradation on 09-Nov-2011 ,
hydroxymethylpyrimidine salvage on 23-Sep-2011 ,
thiamin salvage II on 14-Sep-2011 ,
thiamin diphosphate biosynthesis I (E. coli) on 14-Sep-2011 ,
thiazole biosynthesis I (E. coli) on 14-Sep-2011 ,
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis on 14-Sep-2011 ,
molybdenum cofactor biosynthesis on 20-Jun-2011 ,
ubiquinol-8 biosynthesis (prokaryotic) on 08-Feb-2011 ,
queuosine biosynthesis on 24-Jan-2011 ,
cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate on 17-Jan-2011 ,
guanine and guanosine salvage III on 27-Sep-2010 ,
adenosine nucleotides degradation III on 27-Sep-2010 ,
tetrahydrofolate biosynthesis on 22-Sep-2010 ,
superpathway of tetrahydrofolate biosynthesis on 22-Sep-2010 ,
adenine and adenosine salvage V on 21-Sep-2010 ,
adenine and adenosine salvage III on 21-Sep-2010 ,
guanosine nucleotides degradation III on 20-Sep-2010 ,
adenine and adenosine salvage II on 20-Sep-2010 ,
guanine and guanosine salvage on 20-Aug-2010 ,
superpathway of guanine and guanosine salvage on 20-Aug-2010 ,
biotin biosynthesis I on 18-Aug-2010 ,
8-amino-7-oxononanoate biosynthesis I on 17-Aug-2010 ,
4-aminobutanoate degradation I on 22-Jun-2010 ,
cytidylyl molybdenum cofactor biosynthesis on 05-Apr-2010 ,
UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) on 20-Nov-2009 ,
superpathway of unsaturated fatty acids biosynthesis (E. coli) on 25-Jun-2009 ,
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) on 24-Jun-2009 ,
superpathway of 5-aminoimidazole ribonucleotide biosynthesis on 18-Jun-2009 ,
adenosylcobalamin salvage from cobalamin on 05-Jun-2009 ,
glycolysis II (from fructose 6-phosphate) on 30-Mar-2009 ,
3-dehydroquinate biosynthesis I on 17-Mar-2009 ,
chorismate biosynthesis from 3-dehydroquinate on 17-Mar-2009 ,
autoinducer AI-2 biosynthesis I on 09-Mar-2009 ,
S-adenosyl-L-methionine cycle I on 09-Mar-2009 ,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I on 05-Mar-2009 ,
superpathway of adenosine nucleotides de novo biosynthesis II on 13-Jan-2009 ,
superpathway of guanosine nucleotides de novo biosynthesis II on 13-Jan-2009 ,
inosine-5'-phosphate biosynthesis I on 13-Jan-2009 ,
5-aminoimidazole ribonucleotide biosynthesis II on 13-Jan-2009 ,
5-aminoimidazole ribonucleotide biosynthesis I on 13-Jan-2009 ,
superpathway of phenylethylamine degradation on 23-Oct-2008 ,
pseudouridine degradation on 27-Aug-2008 ,
acyl carrier protein metabolism I on 13-Aug-2008 ,
cis-vaccenate biosynthesis on 11-Jul-2008 ,
palmitate biosynthesis II (bacteria and plants) on 10-Jul-2008 ,
fatty acid biosynthesis initiation II on 07-Jul-2008 ,
fatty acid biosynthesis initiation III on 07-Jul-2008 ,
guanylyl molybdenum cofactor biosynthesis on 20-Jun-2008 ,
superpathway of L-asparagine biosynthesis on 01-May-2008 ,
2,3-dihydroxybenzoate biosynthesis on 25-Apr-2008 ,
demethylmenaquinol-8 biosynthesis I on 17-Mar-2008 ,
1,4-dihydroxy-2-naphthoate biosynthesis I on 05-Mar-2008 ,
di-trans,poly-cis-undecaprenyl phosphate biosynthesis on 06-Feb-2008 ,
octaprenyl diphosphate biosynthesis on 05-Feb-2008 ,
4-hydroxybenzoate biosynthesis II (microbes) on 04-Jan-2008 ,
allantoin degradation to glyoxylate III on 12-Nov-2007 ,
allantoin degradation to ureidoglycolate II (ammonia producing) on 06-Nov-2007 ,
UMP biosynthesis on 24-Oct-2007 ,
phosphatidylethanolamine biosynthesis I on 10-Oct-2007 ,
cardiolipin biosynthesis I on 10-Oct-2007 ,
CDP-diacylglycerol biosynthesis I on 10-Oct-2007 ,
GDP-mannose biosynthesis on 13-Sep-2007 ,
acetate conversion to acetyl-CoA on 31-Jul-2007 ,
acetate formation from acetyl-CoA I on 31-Jul-2007 ,
methylglyoxal degradation IV on 18-Jan-2007 ,
methylglyoxal degradation III on 16-Jan-2007 ,
L-threonine degradation I on 04-Jan-2007 ,
L-threonine degradation IV on 04-Jan-2007 ,
methylglyoxal degradation I on 24-Oct-2006 ,
thiosulfate disproportionation III (rhodanese) on 29-Sep-2006 ,
sulfate activation for sulfonation on 19-Sep-2006 ,
3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation on 10-Jul-2006 ,
siroheme biosynthesis on 15-May-2006 ,
tetrapyrrole biosynthesis I (from glutamate) on 15-May-2006 ,
lipoate biosynthesis and incorporation II on 08-May-2006 ,
2-oxopentenoate degradation on 04-May-2006 ,
β-alanine biosynthesis III on 14-Apr-2006 ,
CMP-3-deoxy-D-manno-octulosonate biosynthesis I on 15-Feb-2006 ,
biotin-carboxyl carrier protein assembly on 01-Feb-2006 ,
2-oxoglutarate decarboxylation to succinyl-CoA on 16-Jan-2006 ,
putrescine biosynthesis III on 10-Oct-2005 ,
putrescine biosynthesis I on 10-Oct-2005 ,
arsenate detoxification II (glutaredoxin) on 06-Sep-2005 ,
glutathionylspermidine biosynthesis on 02-Aug-2005 ,
trehalose degradation II (trehalase) on 31-Jan-2005 ,
folate polyglutamylation on 02-Nov-2004 ,
formaldehyde oxidation II (glutathione-dependent) on 31-Aug-2004

Revised:
enterobactin biosynthesis on 25-Sep-2014 ,
anhydromuropeptides recycling on 15-Oct-2013 ,
colanic acid building blocks biosynthesis on 15-Aug-2013 ,
proline degradation on 17-Apr-2013 ,
superpathway of pyrimidine ribonucleotides de novo biosynthesis on 04-Jan-2013 ,
glycerol degradation I on 09-Nov-2011 ,
polymyxin resistance on 10-Mar-2011 ,
phenylacetate degradation I (aerobic) on 15-Oct-2010 ,
xanthine and xanthosine salvage on 21-Sep-2010 ,
superpathway of 4-aminobutanoate degradation on 23-Jun-2010 ,
peptidoglycan biosynthesis I (meso-diaminopimelate containing) on 08-Mar-2010 ,
chorismate biosynthesis I on 04-Aug-2009 ,
L-cysteine biosynthesis I on 01-Jul-2009 ,
superpathway of heme biosynthesis from uroporphyrinogen-III on 12-Jun-2009 ,
superoxide radicals degradation on 20-Feb-2009 ,
UMP biosynthesis on 24-Dec-2008 ,
L-histidine biosynthesis on 10-Oct-2008 ,
superpathway of thiamin diphosphate biosynthesis I on 07-Oct-2008 ,
CDP-diacylglycerol biosynthesis I on 29-Jul-2008 ,
CDP-diacylglycerol biosynthesis II on 29-Jul-2008 ,
fatty acid biosynthesis initiation I on 07-Jul-2008 ,
superpathway of menaquinol-8 biosynthesis I on 05-Mar-2008 ,
citrate lyase activation on 12-Feb-2008 ,
polyisoprenoid biosynthesis (E. coli) on 15-Jan-2008 ,
4-aminobutanoate degradation II on 08-Jan-2008 ,
glycine biosynthesis I on 07-Jan-2008 ,
NAD salvage pathway III on 03-Jan-2008 ,
L-leucine biosynthesis on 20-Dec-2007 ,
2-methylcitrate cycle I on 11-Dec-2007 ,
glyoxylate cycle on 04-Dec-2007 ,
allantoin degradation IV (anaerobic) on 06-Nov-2007 ,
L-methionine biosynthesis I on 07-May-2007 ,
superpathway of methylglyoxal degradation on 19-Jan-2007 ,
methylglyoxal degradation II on 19-Jan-2007 ,
glycine cleavage on 11-Jan-2007 ,
superpathway of L-threonine metabolism on 11-Jan-2007 ,
L-threonine degradation II on 05-Jan-2007 ,
L-threonine degradation III (to methylglyoxal) on 05-Jan-2007 ,
L-phenylalanine biosynthesis I on 25-Oct-2006 ,
sulfate reduction I (assimilatory) on 19-Sep-2006 ,
heme biosynthesis II (anaerobic) on 19-Jun-2006 ,
heme biosynthesis I (aerobic) on 15-May-2006 ,
lipoate biosynthesis and incorporation I on 08-May-2006 ,
lipoate salvage I on 08-May-2006 ,
L-lysine biosynthesis I on 21-Apr-2006 ,
L-arginine biosynthesis I (via L-ornithine) on 14-Apr-2006 ,
L-ornithine biosynthesis on 14-Apr-2006 ,
superpathway of fatty acid biosynthesis initiation (E. coli) on 03-Feb-2006 ,
L-glutamate degradation II on 17-Jan-2006 ,
pyruvate decarboxylation to acetyl CoA on 17-Jan-2006 ,
spermidine biosynthesis I on 31-Oct-2005 ,
L-arginine degradation III (arginine decarboxylase/agmatinase pathway) on 14-Oct-2005 ,
putrescine degradation II on 13-Oct-2005 ,
putrescine degradation I on 11-Oct-2005 ,
L-arginine degradation II (AST pathway) on 10-Oct-2005 ,
biotin biosynthesis from 8-amino-7-oxononanoate I on 29-Sep-2005 ,
glutathione redox reactions II on 15-Jul-2005 ,
glycine betaine biosynthesis I (Gram-negative bacteria) on 12-Jul-2005 ,
NAD salvage pathway II on 09-May-2005 ,
NAD biosynthesis I (from aspartate) on 09-May-2005 ,
NAD salvage pathway I on 09-May-2005 ,
L-tryptophan degradation II (via pyruvate) on 12-Apr-2005 ,
trehalose degradation I (low osmolarity) on 10-Mar-2005 ,
trehalose biosynthesis I on 09-Feb-2005

Last-Curated:
biotin biosynthesis from 8-amino-7-oxononanoate I on 17-Aug-2010 ,
L-threonine degradation IV on 08-Jan-2007


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 19.0 on Fri Aug 28, 2015, biocyc14.