Escherichia coli K-12 substr. MG1655 Curator: Ron Caspi


Affiliations: SRI International

Note: Listed below are contributions the curator has made to EcoCyc. They are sorted, with the most recent at the top.

Stats: Pathways: 184, Proteins: 343, RNAs: 14, Reactions: 232, Compounds: 1340, Misc.: 0

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sulfoquinovose degradation I on 28-Jan-2014,
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) on 18-Aug-2013,
UDP-D-galactose biosynthesis on 15-Aug-2013,
UDP-glucose biosynthesis on 15-Aug-2013,
UDP-N-acetyl-α-D-mannosaminouronate biosynthesis on 09-Aug-2013,
dTDP-N-acetylthomosamine biosynthesis on 05-Aug-2013,
β-D-glucuronide and D-glucuronate degradation on 14-Mar-2013,
D-fructuronate degradation on 13-Mar-2013,
guanosine deoxyribonucleotides de novo biosynthesis II on 13-Feb-2013,
guanosine ribonucleotides de novo biosynthesis on 13-Feb-2013,
adenosine deoxyribonucleotides de novo biosynthesis II on 13-Feb-2013,
adenosine ribonucleotides de novo biosynthesis on 13-Feb-2013,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis on 31-Jan-2013,
superpathway of pyrimidine nucleobases salvage on 31-Jan-2013,
pyrimidine deoxyribonucleotides dephosphorylation on 30-Jan-2013,
CMP phosphorylation on 30-Jan-2013,
pyrimidine deoxyribonucleotide phosphorylation on 28-Jan-2013,
superpathway of pyrimidine ribonucleosides salvage on 25-Jan-2013,
pyrimidine ribonucleosides salvage III on 25-Jan-2013,
pyrimidine nucleobases salvage II on 24-Jan-2013,
pyrimidine ribonucleosides salvage I on 24-Jan-2013,
pyrimidine deoxyribonucleotides de novo biosynthesis II on 18-Jan-2013,
pyrimidine deoxyribonucleotides de novo biosynthesis I on 16-Jan-2013,
pyrimidine nucleobases salvage I on 15-Jan-2013,
pyrimidine deoxyribonucleosides degradation on 08-Jan-2013,
2'-deoxy-α-D-ribose 1-phosphate degradation on 08-Jan-2013,
purine deoxyribonucleosides degradation I on 08-Jan-2013,
UTP and CTP de novo biosynthesis on 03-Jan-2013,
L-ascorbate degradation II (bacterial, aerobic) on 02-Dec-2011,
glycerophosphodiester degradation on 09-Nov-2011,
hydroxymethylpyrimidine salvage on 23-Sep-2011,
thiamine salvage II on 14-Sep-2011,
thiamine diphosphate biosynthesis I (E. coli) on 14-Sep-2011,
thiazole biosynthesis I (facultative anaerobic bacteria) on 14-Sep-2011,
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis on 14-Sep-2011,
molybdenum cofactor biosynthesis on 20-Jun-2011,
ubiquinol-8 biosynthesis (prokaryotic) on 08-Feb-2011,
queuosine biosynthesis on 24-Jan-2011,
cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate on 17-Jan-2011,
guanine and guanosine salvage III on 27-Sep-2010,
adenosine nucleotides degradation III on 27-Sep-2010,
tetrahydrofolate biosynthesis on 22-Sep-2010,
superpathway of tetrahydrofolate biosynthesis on 22-Sep-2010,
adenine and adenosine salvage V on 21-Sep-2010,
adenine and adenosine salvage III on 21-Sep-2010,
guanosine nucleotides degradation III on 20-Sep-2010,
adenine and adenosine salvage II on 20-Sep-2010,
guanine and guanosine salvage on 20-Aug-2010,
superpathway of guanine and guanosine salvage on 20-Aug-2010,
biotin biosynthesis I on 18-Aug-2010,
8-amino-7-oxononanoate biosynthesis I on 17-Aug-2010,
4-aminobutanoate degradation I on 22-Jun-2010,
cytidylyl molybdenum cofactor biosynthesis on 05-Apr-2010,
UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) on 20-Nov-2009,
superpathway of unsaturated fatty acids biosynthesis (E. coli) on 25-Jun-2009,
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) on 24-Jun-2009,
superpathway of 5-aminoimidazole ribonucleotide biosynthesis on 18-Jun-2009,
adenosylcobalamin salvage from cobalamin on 05-Jun-2009,
glycolysis II (from fructose 6-phosphate) on 30-Mar-2009,
3-dehydroquinate biosynthesis I on 17-Mar-2009,
chorismate biosynthesis from 3-dehydroquinate on 17-Mar-2009,
autoinducer AI-2 biosynthesis I on 09-Mar-2009,
S-adenosyl-L-methionine cycle I on 09-Mar-2009,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I on 05-Mar-2009,
superpathway of adenosine nucleotides de novo biosynthesis II on 13-Jan-2009,
superpathway of guanosine nucleotides de novo biosynthesis II on 13-Jan-2009,
inosine-5'-phosphate biosynthesis I on 13-Jan-2009,
5-aminoimidazole ribonucleotide biosynthesis II on 13-Jan-2009,
5-aminoimidazole ribonucleotide biosynthesis I on 13-Jan-2009,
superpathway of phenylethylamine degradation on 23-Oct-2008,
citrate degradation on 12-Sep-2008,
pseudouridine degradation on 27-Aug-2008,
acyl carrier protein metabolism on 13-Aug-2008,
cis-vaccenate biosynthesis on 11-Jul-2008,
palmitate biosynthesis II (bacteria and plants) on 10-Jul-2008,
fatty acid biosynthesis initiation II on 07-Jul-2008,
fatty acid biosynthesis initiation III on 07-Jul-2008,
guanylyl molybdenum cofactor biosynthesis on 20-Jun-2008,
superpathway of L-asparagine biosynthesis on 01-May-2008,
2,3-dihydroxybenzoate biosynthesis on 25-Apr-2008,
demethylmenaquinol-8 biosynthesis I on 17-Mar-2008,
1,4-dihydroxy-2-naphthoate biosynthesis on 05-Mar-2008,
di-trans,poly-cis-undecaprenyl phosphate biosynthesis on 06-Feb-2008,
octaprenyl diphosphate biosynthesis on 05-Feb-2008,
4-hydroxybenzoate biosynthesis II (microbes) on 04-Jan-2008,
allantoin degradation to glyoxylate III on 12-Nov-2007,
allantoin degradation to ureidoglycolate II (ammonia producing) on 06-Nov-2007,
UMP biosynthesis on 24-Oct-2007,
phosphatidylethanolamine biosynthesis I on 10-Oct-2007,
cardiolipin biosynthesis I on 10-Oct-2007,
CDP-diacylglycerol biosynthesis I on 10-Oct-2007,
GDP-mannose biosynthesis on 13-Sep-2007,
acetate conversion to acetyl-CoA on 31-Jul-2007,
acetate formation from acetyl-CoA I on 31-Jul-2007,
methylglyoxal degradation IV on 18-Jan-2007,
methylglyoxal degradation III on 16-Jan-2007,
L-threonine degradation I on 04-Jan-2007,
L-threonine degradation IV on 04-Jan-2007,
methylglyoxal degradation I on 24-Oct-2006,
thiosulfate disproportionation III (rhodanese) on 29-Sep-2006,
sulfate activation for sulfonation on 19-Sep-2006,
3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation on 10-Jul-2006,
siroheme biosynthesis on 15-May-2006,
tetrapyrrole biosynthesis I (from glutamate) on 15-May-2006,
lipoate biosynthesis and incorporation II on 08-May-2006,
2-oxopentenoate degradation on 04-May-2006,
β-alanine biosynthesis III on 14-Apr-2006,
CMP-3-deoxy-D-manno-octulosonate biosynthesis on 15-Feb-2006,
biotin-carboxyl carrier protein assembly on 01-Feb-2006,
2-oxoglutarate decarboxylation to succinyl-CoA on 16-Jan-2006,
putrescine biosynthesis III on 10-Oct-2005,
putrescine biosynthesis I on 10-Oct-2005,
arsenate detoxification II (glutaredoxin) on 06-Sep-2005,
glutathionylspermidine biosynthesis on 02-Aug-2005,
trehalose degradation II (trehalase) on 31-Jan-2005,
folate polyglutamylation on 02-Nov-2004,
formaldehyde oxidation II (glutathione-dependent) on 31-Aug-2004

enterobactin biosynthesis on 25-Sep-2014,
anhydromuropeptides recycling on 15-Oct-2013,
citrate degradation on 01-Oct-2013,
colanic acid building blocks biosynthesis on 15-Aug-2013,
proline degradation on 17-Apr-2013,
superpathway of pyrimidine ribonucleotides de novo biosynthesis on 04-Jan-2013,
glycerol degradation I on 09-Nov-2011,
polymyxin resistance on 10-Mar-2011,
phenylacetate degradation I (aerobic) on 15-Oct-2010,
xanthine and xanthosine salvage on 21-Sep-2010,
superpathway of 4-aminobutanoate degradation on 23-Jun-2010,
peptidoglycan biosynthesis I (meso-diaminopimelate containing) on 08-Mar-2010,
chorismate biosynthesis I on 04-Aug-2009,
L-cysteine biosynthesis I on 01-Jul-2009,
superpathway of heme biosynthesis from uroporphyrinogen-III on 12-Jun-2009,
superoxide radicals degradation on 20-Feb-2009,
UMP biosynthesis on 24-Dec-2008,
L-histidine biosynthesis on 10-Oct-2008,
superpathway of thiamine diphosphate biosynthesis I on 07-Oct-2008,
CDP-diacylglycerol biosynthesis I on 29-Jul-2008,
CDP-diacylglycerol biosynthesis II on 29-Jul-2008,
fatty acid biosynthesis initiation I on 07-Jul-2008,
superpathway of menaquinol-8 biosynthesis I on 05-Mar-2008,
citrate lyase activation on 12-Feb-2008,
polyisoprenoid biosynthesis (E. coli) on 15-Jan-2008,
4-aminobutanoate degradation II on 08-Jan-2008,
glycine biosynthesis I on 07-Jan-2008,
NAD salvage pathway III on 03-Jan-2008,
L-leucine biosynthesis on 20-Dec-2007,
2-methylcitrate cycle I on 11-Dec-2007,
glyoxylate cycle on 04-Dec-2007,
allantoin degradation IV (anaerobic) on 06-Nov-2007,
L-methionine biosynthesis I on 07-May-2007,
superpathway of methylglyoxal degradation on 19-Jan-2007,
methylglyoxal degradation II on 19-Jan-2007,
glycine cleavage on 11-Jan-2007,
superpathway of L-threonine metabolism on 11-Jan-2007,
L-threonine degradation II on 05-Jan-2007,
L-threonine degradation III (to methylglyoxal) on 05-Jan-2007,
L-phenylalanine biosynthesis I on 25-Oct-2006,
sulfate reduction I (assimilatory) on 19-Sep-2006,
heme biosynthesis II (anaerobic) on 19-Jun-2006,
heme biosynthesis I (aerobic) on 15-May-2006,
lipoate biosynthesis and incorporation I on 08-May-2006,
lipoate salvage I on 08-May-2006,
L-lysine biosynthesis I on 21-Apr-2006,
L-arginine biosynthesis I (via L-ornithine) on 14-Apr-2006,
L-ornithine biosynthesis I on 14-Apr-2006,
superpathway of fatty acid biosynthesis initiation (E. coli) on 03-Feb-2006,
L-glutamate degradation II on 17-Jan-2006,
pyruvate decarboxylation to acetyl CoA on 17-Jan-2006,
spermidine biosynthesis I on 31-Oct-2005,
L-arginine degradation III (arginine decarboxylase/agmatinase pathway) on 14-Oct-2005,
putrescine degradation II on 13-Oct-2005,
putrescine degradation I on 11-Oct-2005,
L-arginine degradation II (AST pathway) on 10-Oct-2005,
biotin biosynthesis from 8-amino-7-oxononanoate I on 29-Sep-2005,
glutathione-glutaredoxin redox reactions on 15-Jul-2005,
glycine betaine biosynthesis I (Gram-negative bacteria) on 12-Jul-2005,
NAD salvage pathway II on 09-May-2005,
NAD biosynthesis I (from aspartate) on 09-May-2005,
NAD salvage pathway I on 09-May-2005,
L-tryptophan degradation II (via pyruvate) on 12-Apr-2005,
trehalose degradation I (low osmolarity) on 10-Mar-2005,
trehalose biosynthesis I on 09-Feb-2005

biotin biosynthesis from 8-amino-7-oxononanoate I on 17-Aug-2010,
L-threonine degradation IV on 08-Jan-2007

Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by Pathway Tools version 19.5 (software by SRI International) on Wed Nov 25, 2015, biocyc13.