Escherichia coli K-12 substr. MG1655 Reaction:

Superclasses: Reactions Classified By Conversion TypeSimple ReactionsChemical Reactions
Reactions Classified By SubstrateMacromolecule ReactionsPolynucleotide-ReactionsRNA-Reactions

EC Number:

Enzymes and Genes:
16S rRNA m5C1407 methyltransferaseInferred from experiment: rsmF

The direction shown, i.e. which substrates are on the left and right sides, is in accordance with the direction in which it was curated.

Most BioCyc compounds have been protonated to a reference pH value of 7.3. Please see the PGDB Concepts Guide for more information.

Mass balance status: Balanced.

Enzyme Commission Primary Name: 16S rRNA (cytosine1407-C5)-methyltransferase

Enzyme Commission Synonyms: RNA m5C methyltransferase YebU, RsmF, YebU

Enzyme Commission Summary:
The enzyme specifically methylates cytosine1407 at C5 in 16S rRNA.

Citations: [Andersen06, Hallberg06]

Gene-Reaction Schematic

Gene-Reaction Schematic

Relationship Links: BRENDA:EC:, ENZYME:EC:, IUBMB-ExplorEnz:EC:

Created 11-Aug-2010 by Kothari A, SRI International


Andersen06: Andersen NM, Douthwaite S (2006). "YebU is a m(5)C Methyltransferase Specific for 16 S rRNA Nucleotide 1407." J Mol Biol 59(3):777-86. PMID: 16678201

Hallberg06: Hallberg BM, Ericsson UB, Johnson KA, Andersen NM, Douthwaite S, Nordlund P, Beuscher AE, Erlandsen H (2006). "The Structure of the RNA m(5)C Methyltransferase YebU from Escherichia coli Reveals a C-terminal RNA-recruiting PUA Domain." J Mol Biol 360(4):774-87. PMID: 16793063

Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by Pathway Tools version 19.5 (software by SRI International) on Wed Nov 25, 2015, biocyc12.