Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
12/28 - 12/31
for maintenance.
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Escherichia coli K-12 substr. MG1655 Reaction: Transport of 2'-deoxyuridine

Superclasses: Reactions Classified By Conversion Type Simple Reactions Transport Reactions Transport Energised by the Membrane Electrochemical Gradient
Reactions Classified By Substrate Small-Molecule Reactions

Transporters and Genes:
nucleoside:H+ symporter NupC Inferred from experiment : nupC
nucleoside:H+ symporter NupG : nupG

Reaction Locations: inner membrane (sensu Gram-negative Bacteria)

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the direction in which it was curated.

Most BioCyc compounds have been protonated to a reference pH value of 7.3, and some reactions have been computationally balanced for hydrogen by adding free protons. Please see the PGDB Concepts Guide for more information.

Mass balance status: Balanced.

Gene-Reaction Schematic: ?

Instance reactions of [a nucleoside[periplasmic space] + H+[periplasmic space] → a nucleoside[cytosol] + H+[cytosol]] (no EC#):
i1: uridine[periplasmic space] + H+[periplasmic space] → uridine[cytosol] + H+[cytosol] (no EC#)

i2: thymidine[periplasmic space] + H+[periplasmic space] → thymidine[cytosol] + H+[cytosol] (no EC#)

i3: inosine[periplasmic space] + H+[periplasmic space] → inosine[cytosol] + H+[cytosol] (no EC#)

i4: 2'-deoxyuridine[periplasmic space] + H+[periplasmic space] → 2'-deoxyuridine[cytosol] + H+[cytosol] (no EC#)
i5: 2'-deoxyinosine[periplasmic space] + H+[periplasmic space] → 2'-deoxyinosine[cytosol] + H+[cytosol] (no EC#)

i6: 2'-deoxycytidine[periplasmic space] + H+[periplasmic space] → 2'-deoxycytidine[cytosol] + H+[cytosol] (no EC#)

i7: 2'-deoxyadenosine[periplasmic space] + H+[periplasmic space] → 2'-deoxyadenosine[cytosol] + H+[cytosol] (no EC#)

i8: cytidine[periplasmic space] + H+[periplasmic space] → cytidine[cytosol] + H+[cytosol] (no EC#)

i9: adenosine[periplasmic space] + H+[periplasmic space] → adenosine[cytosol] + H+[cytosol] (no EC#)

i10: xanthosine[periplasmic space] + H+[periplasmic space] → xanthosine[cytosol] + H+[cytosol] (no EC#)


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Fri Dec 26, 2014, BIOCYC14A.