Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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Escherichia coli K-12 substr. MG1655 Reaction: Transport of thymidine

Superclasses: Reactions Classified By Conversion Type Simple Reactions Transport Reactions Transport Energised by the Membrane Electrochemical Gradient
Reactions Classified By Substrate Small-Molecule Reactions

Transporters and Genes:
nucleoside:H+ symporter NupC Inferred from experiment : nupC
nucleoside:H+ symporter NupG : nupG

Reaction Locations: inner membrane (sensu Gram-negative Bacteria)

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the direction in which it was curated.

Most BioCyc compounds have been protonated to a reference pH value of 7.3, and some reactions have been computationally balanced for hydrogen by adding free protons. Please see the PGDB Concepts Guide for more information.

Mass balance status: Balanced.

Gene-Reaction Schematic: ?

Instance reactions of [a nucleoside[periplasmic space] + H+[periplasmic space] → a nucleoside[cytosol] + H+[cytosol]] (no EC#):
i1: uridine[periplasmic space] + H+[periplasmic space] → uridine[cytosol] + H+[cytosol] (no EC#)

i2: thymidine[periplasmic space] + H+[periplasmic space] → thymidine[cytosol] + H+[cytosol] (no EC#)
i3: inosine[periplasmic space] + H+[periplasmic space] → inosine[cytosol] + H+[cytosol] (no EC#)

i4: 2'-deoxyuridine[periplasmic space] + H+[periplasmic space] → 2'-deoxyuridine[cytosol] + H+[cytosol] (no EC#)

i5: 2'-deoxyinosine[periplasmic space] + H+[periplasmic space] → 2'-deoxyinosine[cytosol] + H+[cytosol] (no EC#)

i6: 2'-deoxycytidine[periplasmic space] + H+[periplasmic space] → 2'-deoxycytidine[cytosol] + H+[cytosol] (no EC#)

i7: 2'-deoxyadenosine[periplasmic space] + H+[periplasmic space] → 2'-deoxyadenosine[cytosol] + H+[cytosol] (no EC#)

i8: cytidine[periplasmic space] + H+[periplasmic space] → cytidine[cytosol] + H+[cytosol] (no EC#)

i9: adenosine[periplasmic space] + H+[periplasmic space] → adenosine[cytosol] + H+[cytosol] (no EC#)

i10: xanthosine[periplasmic space] + H+[periplasmic space] → xanthosine[cytosol] + H+[cytosol] (no EC#)


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Sat Nov 22, 2014, biocyc14.