twitter

Escherichia coli K-12 substr. MG1655 RNA: Tp2 small RNA



Gene: tp2 Accession Number: G0-8894 (EcoCyc)

Superclasses: Misc-RNAs

Regulation Summary Diagram: ?

Regulation summary diagram for tp2

Summary:
Tp2 is a small RNA of approximately 120 nt in length, and a 60 nt transcript is also observed [Rivas01]. The gene position corresponds to that of the predicted site of the gene, which would encode an RNA of 160 nt [Rivas01].

Review: [Hershberg03]

Map Position: [122,697 <- 122,857] (2.64 centisomes, 10°)
Length: 161 bp

Unification Links: PortEco:tp2 , RegulonDB:G0-8894

MultiFun Terms: information transfer RNA related


Gene Local Context (not to scale): ?

Gene local context diagram

Transcription Unit:

Transcription-unit diagram

Notes:


References

Hershberg03: Hershberg R, Altuvia S, Margalit H (2003). "A survey of small RNA-encoding genes in Escherichia coli." Nucleic Acids Res 31(7);1813-20. PMID: 12654996

Rivas01: Rivas E, Klein RJ, Jones TA, Eddy SR (2001). "Computational identification of noncoding RNAs in E. coli by comparative genomics." Curr Biol 11(17);1369-73. PMID: 11553332


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 19.0 on Tue Jul 28, 2015, biocyc14.