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discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites MAYBE down
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for maintenance.
Metabolic Modeling Tutorial
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BioCyc websites MAYBE down
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Summary of Escherichia coli, Strain K-12 substr. MG1655, version 18.5

Authors: Peter D. Karp1, Ingrid Keseler1, Carol Fulcher1, Anamika Kothari1, Suzanne Paley1, Markus Krummenacker1, Dan Weaver1, Ian Paulsen2, Amanda Mackie2, Julio Collado-Vides3, Cesar Bonavides-Martinez3, Socorro Gama-Castro3, Alberto Santos-Zavaleta3, Verena Weiss3, John L Ingraham4, Robert Gunsalus5

1SRI International, 2Macquarie University, 3Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico, 4University of California, Davis, 5University of California, Los Angeles

Summary:
NIL


Citations: [Keseler13]

Taxonomic lineage: cellular organisms , Bacteria , Proteobacteria , Gammaproteobacteria , Enterobacteriales , Enterobacteriaceae , Escherichia , Escherichia coli , Escherichia coli K-12 , Escherichia coli K-12 substr. MG1655

Unification Links: GOLD:Gp0072557 , NCBI-Taxonomy:511145

Organism or Sample Properties
Relationship To Oxygenfacultative
Temperature Rangemesophile

RepliconTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
Chromosome450142822071444,639,675
Genes without a physical map position:2

Pathways:328
Enzymatic Reactions:1721
Transport Reactions:400
Polypeptides:4543
Protein Complexes:1052
Enzymes:1533
Transporters:267
Compounds:2518
Transcription Units:3538
tRNAs:89
Growth Media:431

Genetic Code Number:
11 -- Bacterial and Plant Plastid (same as Standard, except for alternate initiation codons)

PGDB Unique ID: 0

Copyright SRI International 1999-2014, Marine Biological Laboratory 1998-2001, DoubleTwist Inc 1998-1999. All Rights Reserved.


References

Keseler13: Keseler IM, Mackie A, Peralta-Gil M, Santos-Zavaleta A, Gama-Castro S, Bonavides-Martinez C, Fulcher C, Huerta AM, Kothari A, Krummenacker M, Latendresse M, Muniz-Rascado L, Ong Q, Paley S, Schroder I, Shearer AG, Subhraveti P, Travers M, Weerasinghe D, Weiss V, Collado-Vides J, Gunsalus RP, Paulsen I, Karp PD (2013). "EcoCyc: fusing model organism databases with systems biology." Nucleic Acids Res 41(D1);D605-12. PMID: 23143106


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of EcoCyc: Nucleic Acids Research 41:D605-12 2013
Page generated by SRI International Pathway Tools version 18.5 on Fri Dec 26, 2014, biocyc13.