Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
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MetaCyc Compound Class: a (1->3)-β-D-xylan oligosaccharide

Superclasses: all carbohydrates a carbohydrate a glycan a polysaccharide hemicellulose xylan a (1->3)-beta-D-xylan
all carbohydrates a carbohydrate a glycan an oligosaccharide

Instances:
(1,3)-β-xylobiose ,
(1,3)-β-xylotetraose ,
(1,3)-β-xylotriose

SMILES: C3(O[R2])(OCC(O)C(OC1(C(C(C(CO1)O)OC2(OCC(O[R1])C(O)C(O)2))O))C(O)3)

Reactions known to consume the compound:

(1,3)-β-D-xylan degradation :
a (1->3)-β-D-xylan + n H2O → n a (1->3)-β-D-xylan oligosaccharide
a (1->3)-β-D-xylan oligosaccharide + n H2O → n β-D-xylopyranose

Not in pathways:
xylan + n H2O → n α-D-xylopyranose


a polysaccharide + H2O → an oligosaccharide


a polysaccharide + H2O → an oligosaccharide

Reactions known to produce the compound:

Not in pathways:
acetylxylan + n H2O → xylan + n acetate


keratan sulfate + H2O → n an oligosaccharide
blood group substance B + H2O → n an oligosaccharide
blood group substance A + H2O → n an oligosaccharide
a sialyloligosaccharide + H2O → an oligosaccharide + N-acetylneuraminate
a 1,2-β-D-glucan + H2O → n an oligosaccharide
a fucoidan + H2O → fucose + a fucose sulfate + an oligosaccharide

cellulose and hemicellulose degradation (cellulolosome) :
a feruloyl-polysaccharide + H2O → ferulate + a polysaccharide + 2 H+


an N-acetyl-β-D-galactosalaminyl-[glycan] + H2O → a glycan + N-acetyl-β-D-galactosamine

In Transport reactions:
an oligosaccharide[extracellular space] + ATP + H2O ↔ an oligosaccharide[cytosol] + ADP + phosphate


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Sun Dec 21, 2014, biocyc14.