MetaCyc All-Genes Class: defense/survival

The adaptation to stress was meant to cover the classical stress inducers such as osmotic pressure, temperature, starvation. The protection category was meant to cover those related to compound / chemical induced killing or stress. The defense/survival category was meant to cover virulence factors (although K-12 does not have many).

Parent Classes:
cell processes

alaE (L-alanine exporter) ,
casA (Cascade subunit A) ,
casB (Cascade subunit B) ,
casC (Cascade subunit C) ,
casD (Cascade subunit D) ,
casE (crRNA endonuclease) ,
chpA (MazF toxin of the MazF-MazE toxin-antitoxin system that exhibits ribonuclease activity) ,
chpR (MazE antitoxin of the MazF-MazE toxin-antitoxin system) ,
chpS (ChpS antitoxin of the ChpB-ChpS toxin-antitoxin system) ,
msrA (methionine sulfoxide reductase A) ,
yefM (YefM antitoxin of the YoeB-YefM toxin-antitoxin pair and DNA binding transcriptional repressor) ,
yoeB (toxin of the YoeB-YefM toxin-antitoxin pair)

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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 19.0 on Tue Apr 21, 2015, biocyc14.