Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc EC 1 -- Oxidoreductases

Parent Class: EC-Numbers

Child Classes:
1.1 -- Acting on the CH-OH group of donors (846) ,
1.2 -- Acting on the aldehyde or oxo group of donors (216) ,
1.3 -- Acting on the CH-CH group of donors (388) ,
1.4 -- Acting on the CH-NH(2) group of donors (88) ,
1.5 -- Acting on the CH-NH group of donors (123) ,
1.6 -- Acting on NADH or NADPH (33) ,
1.7 -- Acting on other nitrogenous compounds as donors (54) ,
1.8 -- Acting on a sulfur group of donors (65) ,
1.9 -- Acting on a heme group of donors (4) ,
1.10 -- Acting on diphenols and related substances as donors (35) ,
1.11 -- Acting on a peroxide as acceptor (49) ,
1.12 -- Acting on hydrogen as donor (14) ,
1.13 -- Acting on single donors with incorporation of molecular oxygen (149) ,
1.14 -- Acting on paired donors, with incorporation or reduction of molecular oxygen (1049) ,
1.15 -- Acting on superoxide as acceptor (2) ,
1.16 -- Oxidizing metal ions (19) ,
1.17 -- Acting on CH or CH(2) groups (58) ,
1.18 -- Acting on iron-sulfur proteins as donors (10) ,
1.19 -- Acting on reduced flavodoxin as donor (1) ,
1.20 -- Acting on phosphorus or arsenic in donors (7) ,
1.21 -- Acting on x-H and y-H to form an x-y bond (23) ,
1.22 -- Acting on halogen in donors (0) ,
1.23 -- Reducing C-O-C group as acceptor (4) ,
1.97 -- Other oxidoreductases (26)

Unofficial Reactions:
GDP-4-dehydro-6-L-deoxygalactose + NADPH + H+ = GDP-L-fucose + NADP+ ,
an oxidized nitroaromatic compound + NADPH = a reduced nitroaromatic compound + NADP+ ,
(Z)-phenylacetaldehyde oxime + NADP+ → phenylacetonitrile oxide + NADPH + H+ ,
salicylaldehyde + a reduced electron acceptor → salicyl alcohol + an oxidized electron acceptor ,
2 emodin + oxygen + 2 H2O = hypericin + 4 H2O + oxygen ,
dihydrogeodin + oxygen + 4 H+ → geodin + 2 H2O ,
(+)-sesamin + oxygen + 2 H+ → (+)-sesaminol + H2O ,
pumiloside → deoxypumiloside ,
4-coumarate → (E)-2,4-dihydroxycinnamate ,
(+)-piperitol + 2 H+ + oxygen → (+)-sesamolinol + H2O ,
(+)-sesamolinol + 2 H+ + oxygen → (+)-sesamolin + 2 H2O ,
(+)-sesamin + 2 H+ + oxygen → (+)-sesamolin + H2O ,
β-peltatin-A methylether + 2 H+ + oxygen → 6-methoxypodophyllotoxin + H2O ,
2-oxopent-4-enoate → 2-oxopenta-3,4-dienoate + 2 H+ ,
5-pentadecatrienyl resorcinol-3-methyl ether + a reduced electron acceptor + oxygen → dihydrosorgoleone + an oxidized electron acceptor + H2O ,
S-hydroxymethylglutathione + NAD+ = S-formylglutathione + NADH + H+ ,
d-biotin d-sulfoxide + a reduced thioredoxin ↔ biotin + an oxidized thioredoxin + H2O ,
an even numbered straight chain 2,3,4-saturated fatty acid + NAD(P)H + H+ + oxygen → a (R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acid + NAD(P)+ + H2O ,
an eicosapentaenoyl-[acp] + a malonyl-[acp] + H+ = a 3-oxo-docosapentaenoyl [acp] + a holo-[acyl-carrier protein] + CO2

Enzymes and Genes:
Δ5-elongase : MpELO2 ( Marchantia polymorpha )
fatty acid 2-hydroxylase : FA2H ( Homo sapiens )
biotin sulfoxide reductase : bisC ( Escherichia coli K-12 substr. MG1655 )
biotin sulfoxide reductase ( Rhodobacter sphaeroides )
NAD- and glutathione-dependent formaldehyde dehydrogenase : adhI ( Rhodobacter sphaeroides )
NAD- and glutathione-dependent formaldehyde dehydrogenase : flhA ( Paracoccus denitrificans )
alcohol dehydrogenase / S-hydroxymethyl-glutathione dehydrogenase : SFA1 ( Saccharomyces cerevisiae )
formaldehyde dehydrogenase : frmA ( Escherichia coli K-12 substr. MG1655 )
dihydrogeodin oxidase / sulochrin oxidase ( Penicillium glabrum )
dihydrogeodin oxidase : DHGO ( Aspergillus terreus )
phenolic oxidative coupling protein : Hyp-1 ( Hypericum perforatum )
CYP83A1 monooxygenase : At4g13770 ( Arabidopsis thaliana col )
CYP83B1 monooxygenase : At4g31500 ( Arabidopsis thaliana col )
NADPH nitroreductase NfsA : nfsA ( Escherichia coli K-12 substr. MG1655 )


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Thu Nov 27, 2014, BIOCYC14A.