Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc EC 3.4 -- Acting on peptide bonds (peptide hydrolases)

Parent Class: EC-Numbers 3 -- Hydrolases

Child Classes:
3.4.11 -- Aminopeptidases (29) ,
3.4.13 -- Dipeptidases (30) ,
3.4.14 -- Dipeptidyl-peptidases and tripeptidyl-peptidases (10) ,
3.4.15 -- Peptidyl-dipeptidases (4) ,
3.4.16 -- Serine-type carboxypeptidases (8) ,
3.4.17 -- Metallocarboxypeptidases (24) ,
3.4.18 -- Cysteine-type carboxypeptidases (1) ,
3.4.19 -- Omega peptidases (15) ,
3.4.21 -- Serine endopeptidases (109) ,
3.4.22 -- Cysteine endopeptidases (60) ,
3.4.23 -- Aspartic endopeptidases (41) ,
3.4.24 -- Metalloendopeptidases (86) ,
3.4.25 -- Threonine endopeptidases (2) ,
3.4.99 -- Endopeptidases of unknown catalytic mechanism (0)

Unofficial Reactions:
peptidoglycan D-alanyl-DAP crosslink[periplasmic space] + H2O[periplasmic space] → peptidoglycan tetrapeptide, glycan chain 1[periplasmic space] + peptidoglycan tetrapeptide, glycan chain 2[periplasmic space] ,
peptidoglycan DAP-DAP crosslink[periplasmic space] + H2O[periplasmic space] → peptidoglycan tetrapeptide, glycan chain 2[periplasmic space] + peptidoglycan tripeptide, glycan chain 1[periplasmic space]

Enzymes and Genes:
meso-diaminopimelic acid-D-alanyl endopeptidase / D-alanyl-D-alanine carboxypeptidase : dacB ( Escherichia coli K-12 substr. MG1655 )
penicillin-binding protein 7 : pbpG ( Escherichia coli K-12 substr. MG1655 )
murein DD-endopeptidase MepM : mepM ( Escherichia coli K-12 substr. MG1655 )
murein DD-endopeptidase MepH : mepH ( Escherichia coli K-12 substr. MG1655 )
murein LD-carboxypeptidase / murein DD-endopeptidase : mepS ( Escherichia coli K-12 substr. MG1655 )
DD-endopeptidase / DD-carboxypeptidase : ampH ( Escherichia coli K-12 substr. MG1655 )
murein DD-endopeptidase, penicillin-insensitive : mepA ( Escherichia coli K-12 substr. MG1655 )


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Fri Nov 28, 2014, BIOCYC14B.