Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc EC 3.5.1 -- In linear amides

Parent Class: EC-Numbers 3 -- Hydrolases 3.5 -- Acting on carbon-nitrogen bonds, other than peptide bonds

Instances:
3.5.1.1 -- asparaginase ,
3.5.1.2 -- glutaminase ,
3.5.1.3 -- ω-amidase ,
3.5.1.4 -- amidase ,
3.5.1.5 -- urease ,
3.5.1.6 -- β-ureidopropionase ,
3.5.1.7 -- ureidosuccinase ,
3.5.1.8 -- formylaspartate deformylase ,
3.5.1.9 -- arylformamidase ,
3.5.1.10 -- formyltetrahydrofolate deformylase ,
3.5.1.11 -- penicillin amidase ,
3.5.1.12 -- biotinidase ,
3.5.1.13 -- aryl-acylamidase ,
3.5.1.14 -- N-acyl-aliphatic-L-amino acid amidohydrolase ,
3.5.1.15 -- aspartoacylase ,
3.5.1.16 -- acetylornithine deacetylase ,
3.5.1.17 -- acyl-lysine deacylase ,
3.5.1.18 -- succinyl-diaminopimelate desuccinylase ,
3.5.1.19 -- nicotinamidase ,
3.5.1.20 -- citrullinase ,
3.5.1.21 -- N-acetyl-β-alanine deacetylase ,
3.5.1.22 -- pantothenase ,
3.5.1.23 -- ceramidase ,
3.5.1.24 -- choloylglycine hydrolase ,
3.5.1.25 -- N-acetylglucosamine-6-phosphate deacetylase ,
3.5.1.26 -- N4-(β-N-acetylglucosaminyl)-L-asparaginase ,
3.5.1.27 -- N-formylmethionylaminoacyl-tRNA deformylase ,
3.5.1.28 -- N-acetylmuramoyl-L-alanine amidase ,
3.5.1.29 -- 2-(acetamidomethylene)succinate hydrolase ,
3.5.1.30 -- 5-aminopentanamidase ,
3.5.1.31 -- formylmethionine deformylase ,
3.5.1.32 -- hippurate hydrolase ,
3.5.1.33 -- N-acetylglucosamine deacetylase ,
3.5.1.35 -- D-glutaminase ,
3.5.1.36 -- N-methyl-2-oxoglutaramate hydrolase ,
3.5.1.38 -- glutamin-(asparagin-)ase ,
3.5.1.39 -- alkylamidase ,
3.5.1.40 -- acylagmatine amidase ,
3.5.1.41 -- chitin deacetylase ,
3.5.1.42 -- nicotinamide-nucleotide amidase ,
3.5.1.43 -- peptidyl-glutaminase ,
3.5.1.44 -- protein-glutamine glutaminase ,
3.5.1.46 -- 6-aminohexanoate-oligomer exohydrolase ,
3.5.1.47 -- N-acetyldiaminopimelate deacetylase ,
3.5.1.48 -- acetylspermidine deacetylase ,
3.5.1.49 -- formamidase ,
3.5.1.50 -- pentanamidase ,
3.5.1.51 -- 4-acetamidobutyryl-CoA deacetylase ,
3.5.1.52 -- peptide-N4-(N-acetyl-β-glucosaminyl)asparagine amidase ,
3.5.1.53 -- N-carbamoylputrescine amidase ,
3.5.1.54 -- allophanate hydrolase ,
3.5.1.55 -- long-chain-fatty-acyl-glutamate deacylase ,
3.5.1.56 -- N,N-dimethylformamidase ,
3.5.1.57 -- tryptophanamidase ,
3.5.1.58 -- N-benzyloxycarbonylglycine hydrolase ,
3.5.1.59 -- N-carbamoylsarcosine amidase ,
3.5.1.60 -- N-(long-chain-acyl)ethanolamine deacylase ,
3.5.1.61 -- mimosinase ,
3.5.1.62 -- acetylputrescine deacetylase ,
3.5.1.63 -- 4-acetamidobutyrate deacetylase ,
3.5.1.64 -- Nα-benzyloxycarbonylleucine hydrolase ,
3.5.1.65 -- theanine hydrolase ,
3.5.1.66 -- 2-(hydroxymethyl)-3-(acetamidomethylene)succinate hydrolase ,
3.5.1.67 -- 4-methyleneglutaminase ,
3.5.1.68 -- N-formylglutamate deformylase ,
3.5.1.69 -- glycosphingolipid deacylase ,
3.5.1.70 -- aculeacin-A deacylase ,
3.5.1.71 -- N-feruloylglycine deacylase ,
3.5.1.72 -- D-benzoylarginine-4-nitroanilide amidase ,
3.5.1.73 -- carnitinamidase ,
3.5.1.74 -- chenodeoxycholoyltaurine hydrolase ,
3.5.1.75 -- urethanase ,
3.5.1.76 -- arylalkyl acylamidase ,
3.5.1.77 -- N-carbamoyl-D-amino-acid hydrolase ,
3.5.1.78 -- glutathionylspermidine amidase ,
3.5.1.79 -- phthalyl amidase ,
3.5.1.81 -- N-acyl-D-amino-acid deacylase ,
3.5.1.82 -- N-acyl-D-glutamate deacylase ,
3.5.1.83 -- N-acyl-D-aspartate deacylase ,
3.5.1.84 -- biuret amidohydrolase ,
3.5.1.85 -- (S)-N-acetyl-1-phenylethylamine hydrolase ,
3.5.1.86 -- mandelamide amidase ,
3.5.1.87 -- N-carbamoyl-L-amino-acid hydrolase ,
3.5.1.88 -- peptide deformylase ,
3.5.1.89 -- N-acetylglucosaminylphosphatidylinositol deacetylase ,
3.5.1.90 -- adenosylcobinamide hydrolase ,
3.5.1.91 -- N-substituted formamide deformylase ,
3.5.1.92 -- pantetheine hydrolase ,
3.5.1.93 -- glutaryl-7-aminocephalosporanic-acid acylase ,
3.5.1.94 -- γ-glutamyl-γ-aminobutyrate hydrolase ,
3.5.1.95 -- N-malonylurea hydrolase ,
3.5.1.96 -- succinylglutamate desuccinylase ,
3.5.1.97 -- acyl-homoserine-lactone acylase ,
3.5.1.98 -- histone deacetylase ,
3.5.1.99 -- fatty acid amide hydrolase ,
3.5.1.100 -- (R)-amidase ,
3.5.1.101 -- L-proline amide hydrolase ,
3.5.1.102 -- 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5′-monophosphate deformylase ,
3.5.1.103 -- N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-α-D-glucopyranoside deacetylase ,
3.5.1.104 -- peptidoglycan-N-acetylglucosamine deacetylase ,
3.5.1.105 -- chitin disaccharide deacetylase ,
3.5.1.106 -- N-formylmaleamate deformylase ,
3.5.1.107 -- maleamate amidohydrolase ,
3.5.1.108 -- UDP-3-O-acyl-N-acetylglucosamine deacetylase ,
3.5.1.109 -- sphingomyelin deacylase ,
3.5.1.110 -- peroxyureidoacrylate/ureidoacrylate amidohydrolase ,
3.5.1.111 -- 2-oxoglutaramate amidase ,
3.5.1.112 -- 2′-N-acetylparomamine deacetylase ,
3.5.1.113 -- 2′′′-acetyl-6′′′-hydroxyneomycin C deacetylase ,
3.5.1.114 -- N-acyl-aromatic-L-amino acid amidohydrolase ,
3.5.1.115 -- mycothiol S-conjugate amidase ,
3.5.1.116 -- ureidoglycolate amidohydrolase ,
3.5.1.117 -- 6-aminohexanoate-oligomer endohydrolase ,
3.5.1.w -- γ-glutamyl hercynylcysteine S-oxide hydrolase

Unofficial Reactions:
5-acetamidovalerate + H2O → 5-aminopentanoate + acetate ,
pyrazinamide + H2O = ammonium + pyrazine-2-carboxylate ,
4-ureido-5-imidazole carboxylate + H2O + 2 H+ → 4-amino-5-imidazole carboxylate + CO2 + ammonium ,
N,N'-diacetylchitobiose + H2O → 2-acetamido-4-O-(2-amino-2-deoxy-β-D-glucopyranosyl)-2-deoxy-D-glucose + acetate ,
formylaminopyrimidine + H2O → aminomethylpyrimidine + formate ,
N-monoacetylchitobiose + H2O = chitobiose + acetate ,
chitotriose + H2O = N,N''-diacetylchitotriose + acetate ,
2'''-acetyl-6'''-hydroxyparomomycin + H2O → 6'''-hydroxyparomomycin + acetate ,
N-formyldemecolcine + H2O → demecolcine + formate ,
4-hydroxy-2-nonenal-N-acetyl-L-cysteine + H2O = 4-hydroxy-2-nonenal-[L-Cys] conjugate + acetate ,
an [L-2-aminoadipate carrier protein]-L-ornithine + H2O → L-ornithine + a [LysW protein]-L-glutamate ,
(Z)-N,N'-(but-2-ene-2,3-diyl)diacetamide + H2O → N-(3-oxobutan-2-yl)acetamide + acetamide ,
N-(3-hydroxybutan-2-yl)acetamide + H2O → 3-amino-2-butanol + acetate ,
2-formylaminobenzaldehyde + H2O → O-aminobenzaldehyde + formate + H+ ,
γ-glutamylanilide diol + H2O → 1-aminocyclohexa-3,5-diene-1,2-diol + L-glutamate ,
N5-phenyl-L-glutamine + H2O → L-glutamate + aniline + H+ ,
linuron + H2O → N,O-dimethylhydroxylamine + CO2 + 3,4-dichloroaniline ,
indole-3-acetyl-alanine + H2O → indole-3-acetate + L-alanine ,
indole-3-acetyl-leucine + H2O → indole-3-acetate + L-leucine ,
a [LysW]-C-terminal-L-glutamyl-γ-L-lysine + H2O ↔ L-lysine + a [LysW protein]-L-glutamate ,
2-oxosuccinamate + H2O → oxaloacetate + ammonium ,
indole-3-acetyl-aspartate-N-beta-D-glucose + H2O → indole-3-acetyl-N-beta-D-glucose + L-aspartate ,
indole-3-acetyl-glutamate-N-beta-D-glucose + H2O → indole-3-acetyl-N-beta-D-glucose + L-glutamate ,
oxamate + H2O = oxalate + ammonium ,
p-aminobenzoyl glutamate + H2O → 4-aminobenzoate + L-glutamate ,
a [lipoyl-carrier protein] N6-lipoyl-L-lysine + H2O → a [lipoyl-carrier protein]-L-lysine + (R)-lipoate

Enzymes and Genes:
lipoamidase : lpa ( Enterococcus faecalis )
lipoamidase ( Listeria monocytogenes )
p-aminobenzoyl-glutamate hydrolase : abgB , abgA ( Escherichia coli K-12 substr. MG1655 )
p-aminobenzoylglutamate hydrolase ( Arabidopsis thaliana )
2-oxosuccinamate deamidase ( Pisum sativum )
[L-2-aminoadipate carrier protein]-L-lysine lysine-hydrolase : lysK ( Thermus thermophilus )
indole-3-acetyl-leu hydrolase : AT3G02875 ( Arabidopsis thaliana col )
indole-3-acetyl-ala hydrolase : ill2 ( Arabidopsis thaliana col )
indole-3-acetyl-ala hydrolase : iar3 ( Arabidopsis thaliana col )
phenylurea hydrolase A : puhA ( Arthrobacter globiformis D47 )
phenylurea hydrolase B : puhB ( Mycobacterium brisbanense JK1 )
linuron hydrolase : libA ( Variovorax sp. SRS16 )
linuron hydrolase : hylA ( Variovorax sp. WDL1 )
N-glutamylanilide hydrolase / N-glutamylanilide diol hydrolase : atdA2 ( Acinetobacter sp. YAA )
(Z)-N,N'-(but-2-ene-2,3-diyl)diacetamide hydrolase : tpdC ( Rhodococcus sp. TMP1 )
L-2-aminoadipate carrier protein]-lysine/ornithine hydrolase : lysK ( Sulfolobus acidocaldarius )
aminoacylase 3 : ACY3 ( Homo sapiens )
N-formyldemecolcine deformylase [multifunctional] ( Colchicum autumnale )
2'''-acetyl-6'''-hydroxyparomomycin deacetylase : livD ( Streptomyces lividus )
chitin oligosaccharide deacetylase : cod ( Vibrio cholerae O1 biovar El Tor str. N16961 )
N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase : ylmB ( Bacillus halodurans )
chitin deacetylase : cda ( Colletotrichum lindemuthianum )
diacetylchitobiose deacetylase : dac ( Thermococcus kodakarensis KOD1 )
4-ureido-5-imidazolecarboxylate amidohydrolase ( Clostridium cylindrosporum )
nicotinamidase / pyrazinamidase : pncA ( Escherichia coli K-12 substr. MG1655 )


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Sat Nov 22, 2014, BIOCYC13A.