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MetaCyc Gene-Ontology-Terms Class: GO:0005737 - cytoplasm

Definition: All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Parent Classes:
GO:0044424 - intracellular part

Part Of:
GO:0005622 - intracellular

Parts:
GO:0043597 - cytoplasmic replication fork,
GO:0043600 - cytoplasmic replisome (1),
GO:0005794 - Golgi apparatus (27),
GO:0005840 - ribosome (56),
GO:0044444 - cytoplasmic part (2729),
GO:0045239 - tricarboxylic acid cycle enzyme complex (6),
GO:0042579 - microbody (82),
GO:0005783 - endoplasmic reticulum (85),
GO:0005739 - mitochondrion (150),
GO:0045254 - pyruvate dehydrogenase complex (4),
GO:0045248 - cytosolic oxoglutarate dehydrogenase complex (1),
GO:0005960 - glycine cleavage complex (4),
GO:0005829 - cytosol (1716)

Term Members:
reduced thioredoxin 2 (trxC),
thioredoxin 1 (trxA),
sulfur transfer protein (tusE),
biotin carboxyl carrier protein (accB),
sulfur transfer protein (tusA),
protein chain elongation factor EF-P (efp),
chaperone protein DnaK,
predicted PTS permease - SgcB subunit,
GrpE monomer,
frataxin CyaY,
30S ribosomal subunit protein S1 (rpsA),
putative protein secretion protein for export (gspE),
glycine cleavage system H protein (gcvH),
PrlF antitoxin (sohA),
D-Ala-D-Ala dipeptidase (ddpX),
DnaJ monomer,
RNA polymerase, sigma 70 (sigma D) factor (rpoD),
RNA polymerase, sigma S (sigma 38) factor (rpoS),
RNA polymerase, sigma 24 (sigma E) factor (rpoE),
RNA polymerase, sigma 28 (sigma F) factor (fliA),
RNA polymerase, sigma 32 (sigma H) factor (rpoH),
RNA polymerase, sigma 19 factor (fecI),
flavorubredoxin (norV),
sulfur transfer protein complex, TusD subunit,
sulfur transfer protein complex, TusC subunit,
sulfur transfer protein complex, TusB subunit,
CysB,
RhlB,
DNA polymerase III, ψ subunit (holD),
DNA polymerase III, χ subunit (holC),
DnaN,
DNA polymerase III, θ subunit (holE),
predicted PTS permease - FrvA subunit,
predicted PTS permease - SgcA subunit,
AgaX (yadI),
predicted PTS permease - FrwB subunit,
fructose PTS permease - FruB subunit,
apo-[acyl carrier protein] (acpP),
methionine adenosyltransferase (metK),
AcpS,
GTP cyclohydrolase I monomer (folE),
GlmU,
GlmS,
phosphoglucosamine mutase (glmM),
Pgi,
PanD proenzyme, π protein,
quinolinate phosphoribosyltransferase (decarboxylating) monomer (nadC),
NadA,
NadR DNA-binding transcriptional repressor and NMN adenylyltransferase,
cytoplasmic trehalase (treF),
trehalose-6-phosphate hydrolase (treC),
glucokinase (glk),
rhamnulose-1-phosphate aldolase monomer (rhaD),
L-rhamnulose kinase (rhaB),
L-rhamnose mutarotase,
XylA,
L-arabinose isomerase monomer (araA),
L-ribulose 5-phosphate 4-epimerase monomer (araD),
L-ribulokinase monomer (araB),
GlpD,
taurine dioxygenase monomer (tauD),
GarL,
AsnA,
AsnB,
5-keto-D-gluconate 5-reductase (idnO),
propionyl-CoA synthetase (prpE),
2-methylisocitrate lyase (prpB),
N-acetyl-anhydromuramyl-L-alanine amidase (ampD),
UDP-N-acetylmuramate:L-alanyl-γ-D-glutamyl-meso-diaminoheptanedioate-D-alanine ligase [multifunctional] (mpl),
glutamine synthetase (glnA),
ribose 1,5-bisphosphokinase (phnN),
ribose-phosphate diphosphokinase (prs),
PheA,
TyrA,
Gpp,
GDP pyrophosphokinase / GTP pyrophosphokinase (relA),
guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase [multifunctional] (spoT),
L-rhamnose isomerase (rhaA),
N-acetylmannosamine kinase (nanK),
D-serine ammonia-lyase (dsdA),
malate synthase A (aceB),
malate synthase G (glcB),
mannose-6-phosphate isomerase (manA),
L-fuculokinase (fucK),
FucI,
L-fucose mutarotase (fucU),
phosphopentomutase (deoB),
deoxyribose-phosphate aldolase (deoC),
phosphoglucomutase (pgm),
ribokinase (rbsK),
ribose pyranase (rbsD),
NAD kinase monomer (nadK),
glycogen synthase (glgA),
GlgC,
Dut,
thymidylate synthase (thyA),
dTMP kinase (tmk),
Dcd,
ArgA,
acetylglutamate kinase monomer (argB),
N-acetylglutamylphosphate reductase (argC),
ArgE,
Asd,
ornithine decarboxylase, biosynthetic (speC),
ornithine decarboxylase, degradative (speF),
Adi (adiA),
SpeE,
CadA,
lysine decarboxylase 2 (ldcC),
allantoinase monomer (allB),
S-ureidoglycine aminohydrolase (allE),
homoserine O-succinyltransferase (metA),
cobalamin-dependent methionine synthase,
UDP-N-acetylglucosamine enolpyruvoyl transferase (murA),
UDP-N-acetylenolpyruvoylglucosamine reductase (murB),
D-alanyl-D-alanine-adding enzyme (murF),
UDP-N-acetylmuramate-alanine ligase (murC),
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase (murD),
UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase (murE),
D-alanine-D-alanine ligase A (ddlA),
D-alanine-D-alanine ligase B (ddlB),
Udp,
uroporphyrinogen decarboxylase (hemE),
ferrochelatase (hemH),
EfeB dimer,
heme-containing peroxidase/deferrochelatase (efeB),
porphyrinogen peroxidase (yfeX),
coproporphyrinogen III oxidase (hemF),
coproporphyrinogen III dehydrogenase (hemN),
AnsA,
L-xylulose kinase (lyxK),
2,3-diketo-L-gulonate reductase monomer (yiaK),
L-ascorbate 6-phosphate lactonase (ulaG),
Tdh,
Kbl,
IlvA,
MhpD,
2-hydroxy-6-ketonona-2,4-dienedioate hydrolase (mhpC),
3-hydroxy-2,4-pentadione 5-phosphate thiolase (lsrF),
autoinducer-2 kinase (lsrK),
4-aminobutyrate aminotransferase (puuE),
GabD,
adenine phosphoribosyltransferase (apt),
hypoxanthine-guanine phosphoribosyltransferase (hpt),
Amn,
murein tripeptide amidase A (mpaA),
AtoB,
glyoxalase III, Hsp31 molecular chaperone (hchA),
N5-carboxyaminoimidazole ribonucleotide synthetase monomer (purK),
PurA,
adenylate kinase (adk),
3-phosphoshikimate-1-carboxyvinyltransferase (aroA),
shikimate kinase II (aroL),
ThiG,
GlpK,
PssA,
isopentenyl diphosphate isomerase (idi),
acetate kinase (ackA),
Pta,
uridine kinase / cytidine kinase (udk),
cytidylate kinase (cmk),
chorismate lyase (ubiC),
3-dehydroquinate synthase (aroB),
AroH,
FolP,
CysH,
phosphoserine phosphatase (serB),
thymidine kinase / deoxyuridine kinase (tdk),
glutamate-pyruvate aminotransferase (alaA),
glutamate-pyruvate aminotransferase (alaC),
ribonucleoside hydrolase 1 (pyrimidine-specific) (rihA),
UMP kinase (pyrH),
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (gpmM),
phosphoglycerate kinase (pgk),
glyceraldehyde 3-phosphate dehydrogenase-A monomer (gapA),
triosephosphate isomerase monomer (tpiA),
fructose bisphosphate aldolase monomer (fbaB),
fructose-1,6-bisphosphatase monomer (fbp),
fructose 1,6-bisphosphatase II (glpX),
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase monomer (gpmA),
N6-L-threonylcarbamoyladenine synthase, TsaB subunit,
N6-L-threonylcarbamoyladenine synthase, TsaD subunit,
N6-L-threonylcarbamoyladenine synthase, TsaE subunit,
threonylcarbamoyl-AMP synthase (tsaC),
ureidoglycolate dehydrogenase (allD),
7-cyano-7-deazaguanine reductase (queF),
tRNA-guanine transglycosylase monomer (tgt),
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA),
epoxyqueuosine reductase (queG),
transaldolase B (talB),
dethiobiotin synthetase monomer (bioD),
adenosylmethionine-8-amino-7-oxononanoate aminotransferase monomer (bioA),
argininosuccinate lyase (argH),
ArgI,
ArgF,
carbamoyl phosphate synthetase, α chain (carA),
carbamoyl phosphate synthetase, β chain,
arginyl-tRNA synthetase (argS),
cysteinyl-tRNA synthetase (cysS),
glutaminyl-tRNA synthetase (glnS),
glutamyl-tRNA synthetase (gltX),
isoleucyl-tRNA synthetase (ileS),
leucyl-tRNA synthetase (leuS),
valyl-tRNA synthetase (valS),
alanyl-tRNA synthetase (alaS),
asparaginyl-tRNA synthetase (asnS),
aspartyl-tRNA synthetase (aspS),
tyrosyl-tRNA synthetase (tyrS),
tryptophanyl-tRNA synthetase (trpS),
threonyl-tRNA synthetase (thrS),
prolyl-tRNA synthetase (proS),
phenylalanyl-tRNA synthetase β-chain (pheT),
phenylalanyl-tRNA synthetase α-chain (pheS),
lysyl tRNA synthetase (LysRSs), constitutive (lysS),
histidyl-tRNA synthetase (hisS),
glycyl-tRNA synthetase, α subunit (glyQ),
glycyl-tRNA synthetase, β subunit (glyS),
methionyl-tRNA synthetase (metG),
threonine synthase (thrC),
glutamate decarboxylase B subunit (gadB),
cyclopropane fatty acyl phospholipid synthase (cfa),
malate dehydrogenase (mdh),
citrate synthase monomer (gltA),
2-methylcitrate synthase (prpC),
aconitate hydratase 1 (acnA),
fumarase C monomer (fumC),
succinyl-CoA synthetase, β subunit,
succinyl-CoA synthetase, α subunit (sucD),
Icd,
molybdopterin adenylyltransferase (mog),
molybdopterin molybdenumtransferase (moeA),
hydroxymethylbilane synthase (hemC),
glutamate-1-semialdehyde aminotransferase (hemL),
DapF,
N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (argD),
tetrahydrodipicolinate succinylase (dapD),
4-hydroxy-tetrahydrodipicolinate synthase (dapA),
4-hydroxy-tetrahydrodipicolinate reductase (dapB),
lipoyl synthase (lipA),
thiamine phosphate synthase (thiE),
pantetheine-phosphate adenylyltransferase monomer (coaD),
dephospho-CoA kinase (coaE),
Dfp,
LeuB,
2-isopropylmalate synthase (leuA),
phosphoenolpyruvate carboxykinase (ATP) (pck),
SodA,
SodB,
UDP-L-Ara4O C-4" transaminase (arnB),
FabH,
FabA,
FabZ,
aspartate carbamoyltransferase, PyrI subunit,
aspartate carbamoyltransferase, PyrB subunit,
PyrC,
PyrE,
PyrF,
dihydroorotate dehydrogenase, type 2 (pyrD),
HisB,
imidazole glycerol phosphate synthase, HisF subunit,
imidazole glycerol phosphate synthase, HisH subunit,
N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (hisA),
phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase (hisI),
HisG,
PurF,
phosphoribosylamine-glycine ligase (purD),
phosphoribosylformylglycinamide synthetase (purL),
PurM,
phosphoribosylglycinamide formyltransferase 2 (purT),
UDP-N-acetylglucosamine 2-epimerase (wecB),
Epd,
PdxJ,
erythronate-4-phosphate dehydrogenase (pdxB),
SerC,
PdxA,
UDP-glucose 4-epimerase monomer (galE),
3-deoxy-D-manno-octulosonate cytidylyltransferase (kdsB),
3-deoxy-D-manno-octulosonate 8-phosphate synthase (kdsA),
D-arabinose 5-phosphate isomerase (gutQ),
phosphoribosylglycinamide formyltransferase 1 (purN),
D,D-heptose 1,7-bisphosphate phosphatase (gmhB),
D-sedoheptulose 7-phosphate isomerase (lpcA),
CaiB monomer,
2-ketobutyrate formate-lyase/pyruvate formate-lyase 4, inactive (tdcE),
PflB,
bifunctional folylpolyglutamate synthetase / dihydrofolate synthetase (folC),
glycerol-3-phosphate dehydrogenase (gpsA),
pantothenate synthetase monomer (panC),
2-dehydropantoate 2-reductase (panE),
3-methyl-2-oxobutanoate hydroxymethyltransferase monomer (panB),
pantothenate kinase monomer (coaA),
AccC,
acetyl-CoA carboxyltransferase, α subunit (accA),
acetyl-CoA carboxyltransferase, β subunit (accD),
hydrogenase 2 - [Fe-S] binding, ferredoxin-type component HybA,
LpxB,
UDP-2,3-diacylglucosamine hydrolase (lpxH),
LpxD,
UDP-3-O-acyl-N-acetylglucosamine deacetylase (lpxC),
LpxA,
6-phosphofructokinase-1 monomer (pfkA),
FadD,
FadI monomer,
FadJ monomer,
thioredoxin reductase monomer (trxB),
glutathione reductase (NADPH) (gor),
FrmA,
Fcl,
galactokinase (galK),
galactose-1-phosphate uridylyltransferase (galT),
galactose-1-epimerase (galM),
fused PutA transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase,
TdcB,
tryptophanase (tnaA),
CysM,
O-acetylserine sulfhydrylase A (cysK),
serine acetyltransferase monomer (cysE),
MetC,
selenide, water dikinase (selD),
selenocysteine synthase (selA),
seryl-tRNA synthetase (serS),
pyrroline-5-carboxylate reductase monomer (proC),
ProA,
ProB,
GdhA,
glutamate synthase, small subunit (gltD),
glutamate synthase, large subunit (gltB),
carbonic anhydrase monomer (cynT),
cyanase monomer (cynS),
GlgP,
geranyl diphosphate synthase / farnesyl diphosphate synthase (ispA),
subunit of undecaprenyl diphosphate synthase (ispU),
xanthosine phosphorylase (xapA),
16S rRNA m3U1498 methyltransferase monomer (rsmE),
23S rRNA pseudouridine synthase (rluC),
oligoribonuclease monomer (orn),
tRNA pseudouridine synthase I (truA),
Lon,
KpLE2 phage-like element; 2-dehydro-3-deoxy-D-pentonate aldolase (yjhH),
CP4-6 prophage; probable 2-keto-3-deoxygluconate aldolase (yagE),
α-amylase (amyA),
tRNAMet cytidine acetyltransferase (tmcA),
Ndk,
tellurite methyltransferase (tehB),
catalase II (katE),
23S rRNA m5C1962 methyltransferase monomer (rlmI),
tryptophan synthase, β subunit (trpB),
tryptophan synthase, α subunit (trpA),
formamidopyrimidine DNA glycosylase (mutM),
Mlc titration factor (mtfA),
2,3-diaminopropionate ammonia-lyase (ygeX),
leucyl, phenylalanyl-tRNA-protein transferase (aat),
nitrate reductase A, β subunit (narH),
nitrate reductase Z, β subunit (narY),
pimeloyl-[acp] methyl ester esterase (bioH),
L-isoaspartate protein carboxylmethyltransferase type II (pcm),
16S rRNA 2'-O-ribose C1402 methyltransferase (rsmI),
23S rRNA 2'-O-ribose U2552 methyltransferase (rlmE),
uracil-DNA glycosylase (ung),
GuaC,
branch migration of Holliday structures; repair (ruvA),
branch migration of Holliday structures; repair helicase (ruvB),
Holliday junction nuclease; resolution of structures; repair (ruvC),
peptidase T,
5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase (ybjI),
lipid kinase (yegS),
fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase (rlmL),
protein-lysine deacetylase and desuccinylase (cobB),
RNase III (rnc),
peptidase E, a dipeptidase where amino-terminal residue is aspartate (pepE),
deoxyribodipyrimidine photolyase (photoreactivation) (phr),
RNA polymerase, α subunit (rpoA),
RNA polymerase, β' subunit (rpoC),
RNA polymerase, β subunit (rpoB),
chito-oligosaccharide mono-deacetylase (chbG),
L-aspartate oxidase (nadB),
16S rRNA m5C967 methyltransferase (rsmB),
excision nuclease subunit A (uvrA),
excinuclease ABC, subunit C; repair of UV damage to DNA (uvrC),
DNA repair; excision nuclease subunit B (uvrB),
GhrB,
glyoxylate reductase / hydroxypyruvate reductase (ghrA),
ssDNA/RNA exonuclease, 3' → 5' specific (tatD),
Ppa,
tRNA m1G37 methyltransferase (trmD),
dipeptidyl carboxypeptidase II (dcp),
adenosine-3'(2'),5'-bisphosphate nucleotidase (cysQ),
valine-pyruvate aminotransferase (avtA),
3-mercaptopyruvate:cyanide sulfurtransferase [multifunctional] (sseA),
β-phosphoglucomutase (ycjU),
ribonuclease G (RNAse G) monomer (rng),
EF-P-lysine lysyltransferase (epmA),
AspC,
23S rRNA m6A1618 methyltransferase (rlmF),
23S rRNA pseudouridine synthase (rluD),
glutathione S-transferase (gstA),
glutathione S-transferase (yfcF),
cAMP phosphodiesterase (cpdA),
hybrid-cluster protein (hcp),
monoacetylchitobiose-6-phosphate hydrolase (chbF),
β-1,6-galactofuranosyltransferase (wbbI),
methylglyoxal synthase (mgsA),
L-2-hydroxyglutarate oxidase (lhgO),
NAD(P)H:quinone oxidoreductase (wrbA),
Eda,
RNase I, cleaves phosphodiester bond between any two nucleotides,
proofreading thioesterase in enterobactin biosynthesis (entH),
phenylhydantoinase (hyuA),
xylulokinase (xylB),
tRNA m5U54 methyltransferase (trmA),
3-methyl-adenine DNA glycosylase II, inducible (alkA),
2-keto-3-deoxy-L-rhamnonate aldolase (yfaU),
D-Tyr-tRNATyr deacylase (dtd),
ferric reductase, NADPH-dependent (yqjH),
23S rRNA m2G1835 methyltransferase (rlmG),
galactoside O-acetyltransferase monomer (lacA),
trans-aconitate 2-methyltransferase (tam),
citrate lyase, citryl-ACP lyase β subunit (citE),
citrate lyase, citrate-ACP transferase α subunit (citF),
citrate lyase, acyl carrier γ subunit (citD),
dTDP-4-dehydrorhamnose 3,5-epimerase (rfbC),
ferritin iron storage protein (ftnA),
enoyl-[acyl-carrier-protein] reductase subunit (fabI),
AceF,
E3 monomer (lpd),
lipoyl(octanoyl) transferase (lipB),
lipoate-protein ligase A (lplA),
uridylyl-[protein PII],
O6-alkylguanine-DNA-alkyltransferase (ogt),
Ada DNA-binding transcriptional dual regulator,
aminopeptidase A/I (pepA),
lipid hydroperoxide peroxidase (tpx),
thiol peroxidase (bcp),
osmotically inducible peroxiredoxin (osmC),
GlpE,
methyltransferase for 50S ribosomal subunit protein L11 (prmA),
CheB,
formate-dependent nitrite reductase, 4Fe-4S subunit (nrfC),
AceK,
aminopeptidase B (pepB),
serine/threonine protein kinase (rdoA),
ribosomal-protein-S18-alanine N-acetyltransferase (rimI),
ribosomal-protein-S5-alanine N-acetyltransferase (rimJ),
scaffold protein for iron-sulfur cluster assembly (iscU),
FabB,
ribonucleoside diphosphate reductase 1, β subunit, ferritin-like (nrdB),
NrdF,
NrdE,
IadA,
guanylate kinase (gmk),
endonuclease V (nfi),
γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (puuC),
bis(molybdenum cofactor) synthase [multifunctional] (mobA),
alkyl hydroperoxide reductase, AhpC component,
acrylyl-CoA reductase (yhdH),
16S rRNA m7G527 methyltransferase (rsmG),
methylglyoxal reductase [multifunctional] (dkgA),
tRNA-specific 2-thiouridylase (mnmA),
SpeG,
oligopeptidase A (prlC),
adenylate cyclase (cyaA),
peptidyl-tRNA hydrolase (pth),
peptidyl-tRNA hydrolase, ribosome rescue factor (arfB),
N-acetylneuraminate lyase (nanA),
DNA polymerase IV (Y-family DNA polymerase; translesion DNA synthesis) (dinB),
DNA polymerase III, α subunit (dnaE),
DNA polymerase I, 5' --> 3' polymerase, 5' --> 3' and 3' --> 5' exonuclease (polA),
23S rRNA 2'-O-ribose C2498 methyltransferase (rlmM),
16S rRNA pseudouridine 516 synthase (rsuA),
L,D-carboxypeptidase A (ldcA),
diadenosine tetraphosphatase (apaH),
TyrB,
protein involved in modification of U34 in tRNA (mnmG),
GTPase, involved in modification of U34 in tRNA (mnmE),
16S rRNA m5C1407 methyltransferase (rsmF),
MutH,
exonuclease VII, small subunit (xseB),
exonuclease VII, large subunit (xseA),
pyridoxal phosphatase / fructose 1,6-bisphosphatase (ybhA),
nucleoside triphosphate pyrophosphatase (yhdE),
DNA gyrase, subunit B (gyrB),
DNA gyrase, subunit A,
fused 5-methylaminomethyl-2-thiouridine-forming methyltransferase and FAD-dependent demodification enzyme (mnmC),
3-ketoacyl-CoA thiolase (fadA),
NADH-dependent dihydropyrimidine dehydrogenase subunit (preA),
NADH-dependent dihydropyrimidine dehydrogenase subunit (preT),
deoxyguanosine triphosphate triphosphohydrolase (dgt),
AidB,
Hyi,
Fsa (fsaA),
fructose 6-phosphate aldolase 2 (fsaB),
RNase D (rnd),
ThiI,
cysteine desulfurase monomer,
tRNA C32 thiolase (ttcA),
β-N-acetylhexosaminidase (nagZ),
DNA primase (dnaG),
ATP-dependent DNA helicase (recQ),
oligopeptidase B (ptrB),
p-aminobenzoyl-glutamate hydrolase subunit A (abgA),
p-aminobenzoyl-glutamate hydrolase subunit B (abgB),
nitrite reductase - NADH dependent,
nitrite reductase, large subunit (nirB),
nitrite reductase, small subunit (nirD),
acetyl esterase (aes),
amylomaltase (malQ),
glutamyl-Q tRNAAsp synthetase (gluQ),
tRNA(i6A37) synthase (miaA),
D-cysteine desulfhydrase (dcyD),
enterochelin esterase (fes),
methionine-oxo-acid transaminase, PLP-dependent (ybdL),
tRNA (Gm18) 2'-O-methyltransferase (trmH),
23S rRNA m2A2503 methyltransferase and tRNA m2A37 methyltransferase (rlmN),
16S rRNA m62A1518,m62A1519 dimethyltransferase (rsmA),
stationary phase mismatch/uracil DNA glycosylase (mug),
sugar phosphatase (ybiV),
sugar phosphatase (yidA),
phosphosugar phosphatase (yigL),
L-cysteine desulfurase (sufS),
inositol monophosphatase (suhB),
ClpP,
8-oxo-dGTP diphosphatase (mutT),
maltodextrin glucosidase (malZ),
ribosomal protein S12 D88 methylthiotransferase (rimO),
regulatory ATPase (ravA),
tRNAIle-lysidine synthetase (tilS),
16S rRNA m2G1207 methyltransferase (rsmC),
tRNA threonylcarbamoyladenosine dehydratase (tcdA),
16S rRNA m4C1402 methyltransferase (rsmH),
AlkB repair system for alkylated DNA and RNA,
tRNA (cytidine/uridine-2'-O)-ribose methyltransferase (trmL),
PepP,
protease III (ptrA),
isopentenyl-adenosine A37 tRNA methylthiolase (miaB),
pyrimidine nucleotidase (yjjG),
dCMP phosphohydrolase (yfbR),
maltodextrin phosphorylase monomer (malP),
GTPase associated with the 50S subunit of the ribosome (hflX),
selenocysteyl-tRNA-specific translation elongation factor (selB),
phospho-AI-2 isomerase (lsrG),
pyridine nucleotide transhydrogenase, soluble (sthA),
nitric oxide dioxygenase (hmp),
ATP-dependent RNA helicase, specific for 23S rRNA (dbpA),
m7GTP pyrophosphatase (yceF),
23S rRNA 2'-O-ribose G2251 methyltransferase monomer (rlmB),
formyltetrahydrofolate deformylase (purU),
tRNA Cm32/Um32 methyltransferase (trmJ),
protein interacts with RecR and possibly RecF proteins (recO),
recombination and repair (recR),
ssDNA and dsDNA binding, ATP binding (recF),
D-malate / 3-isopropylmalate dehydrogenase (decarboxylating) (dmlA),
broad specificity 5'(3')-nucleotidase and polyphosphatase (umpG),
RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication (rnhA),
RNAse HII, degrades RNA of DNA-RNA hybrids (rnhB),
glycerophosphodiester phosphodiesterase, cytosolic (ugpQ),
RNA pyrophosphohydrolase (rppH),
LtaE,
Eno,
polynucleotide phosphorylase monomer (pnp),
RNase E (rne),
poly(A) polymerase I (pcnB),
RNA 3'-terminal phosphate cyclase (rtcA),
flavodoxin NADP+ reductase (fpr),
NrdG,
RNase R (rnr),
23S rRNA m3Ψ1915 methyltransferase (rlmH),
pyridoxal phosphatase / HMP-PP hydrolase (cof),
fused tRNA nucleotidyltransferase / 2',3'-cyclic phosphodiesterase / 2' nucleotidase and phosphatase (cca),
tRNA m6A37 methyltransferase (yfiC),
peptidase component of the HslVU protease,
ATPase component of the HslVU protease (hslU),
DNA topoisomerase III (topB),
methylglyoxal reductase [multifunctional] (dkgB),
lysyl-tRNA synthetase (lysU),
EntE,
EntB monomer,
serine hydroxymethyltransferase (glyA),
MetB,
disulfide bond reductase (yfcG),
disulfide reductase / organic hydroperoxide reductase (yghU),
FKBP-type peptidyl prolyl cis-trans isomerase (slyD),
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (fklB),
peptidyl-prolyl cis-trans isomerase B (rotamase B) (ppiB),
peptidyl-prolyl cis-trans isomerase C (rotamase C) (ppiC),
peptidyl-prolyl cis-trans isomerase (fkpB),
chaperone protein Tig; trigger factor,
ribonuclease II (rnb),
ThrB,
16S rRNA m2G1516 methyltransferase (rsmJ),
Qor,
chitobiose PTS permease - ChbB subunit,
chitobiose PTS permease - ChbA subunit,
galactitol PTS permease - GatA subunit,
galactitol PTS permease - GatB subunit,
L-ascorbate PTS permease - UlaB subunit,
L-ascorbate PTS permease (ulaC),
mannose PTS permease - ManX subunit,
Enzyme IIAGlc; Crr,
predicted PTS permease - CmtB subunit,
sorbitol PTS permease - SrlB subunit,
xylose ABC transporter - ATP binding subunit (xylG),
dipeptide ABC transporter - putative ATP binding subunit (dppF),
dipeptide ABC transporter - putative ATP binding subunit (dppD),
D-allose ABC transporter - ATP binding subunit (alsA),
L-methionine / D-methionine ABC transporter - ATP binding subunit (metN),
murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit (oppD),
putrescine ABC transporter - ATP binding subunit (potG),
ribose ABC transporter - putative ATP binding subunit (rbsA),
LptB,
protein arginine N-methyltransferase 1 (PRMT1),
HPr (ptsH),
UDP-glucose 4-epimerase (ugeA),
DNA polymerase III, γ subunit (dnaX),
Superoxide dismutase [Cu-Zn] (SOD1),
Dihydropyrimidine dehydrogenase [NADP+] (DPYD),
Aldo-keto reductase family 1 member C1 (AKR1C1),
Aldo-keto reductase family 1 member C4 (AKR1C4),
Maleylacetoacetate isomerase (GSTZ1),
mitogen-activated protein kinase 14 (MAPK14),
tRNAsec (selC),
Arginase-1 (ARG1),
argininosuccinate lyase (ASL),
Argininosuccinate synthase (ASS1),
Pterin-4-alpha-carbinolamine dehydratase (PCBD1),
lysine-8-amino-7-oxononanoate aminotransferase (bioK),
a tRNAsec,
phosphoribosylformylglycinamidine synthase (PFAS),
trifunctional purine biosynthetic protein adenosine-3 (GART),
aminotransferase (AT1G80360.1),
phosphoglucomutase-1 (PGM1),
phosphoenolpyruvate-protein phosphotransferase PtsP, enzyme INtr,
hematopoietic prostaglandin D synthase (HPGDS),
prostaglandin G/H synthase 2 (PTGS2),
Fructose-bisphosphate aldolase B (ALDOB),
sulfur acceptor that activates SufS cysteine desulfurase,
cytosolic thymidine kinase monomer (TK1),
ribonucleoside-diphosphate reductase small subunit (RRM2),
2'-5'-oligoadenylate synthetase 1 monomer (OAS1),
xanthine dehydrogenase,
phosphoenolpyruvate carboxylase,
guanine deaminase,
β-alanine N-methyltransferase,
betaine-homocysteine S-methyltransferase,
S-formylglutathione hydrolase,
4-hydroxyphenylpyruvate dioxygenase,
cytoplasmic glycerol-3-phosphate acyltransferase,
UDP-glucose pyrophosphorylase,
sucrose-phosphate phosphatase,
serine acetyltransferase,
O-acetylserine (thiol) lyase,
5'-methylthioadenosine phosphorylase,
26-kDa subunit (prdB),
N-methyltransferase subunit (BANMT1),
polyamine oxidase (propane-1,3-diamine forming) (MPAO),
mannose-1-phosphate phosphatase,
phosphomannose isomerase,
pyruvate decarboxylase,
phosphoenolpyruvate carboxylase (pep1),
ethanolamine N-methyltransferase,
2'-hydroxydaidzein reductase / 2-hydroxydaidzein reductase,
(+)-pulegone reductase (PR),
Erg20 (FPP1),
IPP isomerase (IDI1),
phosphomevalonate kinase (erg8),
Erg12,
Erg10,
glyoxalase II (cytoplasmic) (glo2),
flavin prenyltransferase (PAD1),
isoflavone-4'-O-methyltransferase,
isoflavone-4'-O-methyltransferase,
monodehydroascorbate reductase,
L-ascorbate peroxidase (cytosolic) (APX1),
ascorbate peroxidase,
chalcone reductase (CHR7),
phosphoribosylformylglycinamidine synthetase (ade6),
cytosolic glucose-6-phosphate isomerase (GPIS),
farnesyl diphosphatase (Pho8),
caffeine demethylase,
exopolygalacturonate lyase W (pelW),
oligogalacturonate lyase (ogl),
catechol O-methyltransferase (Comt),
chalcone 4'-O-glucosyltransferase (4'CGT),
S-adenosylmethionine synthetase (SAMS1),
theobromine synthase (CaMXMT1),
UDPG:coniferyl alcohol glucosyltransferase,
5-epi-aristolochene synthase (TEAS),
adenylate isopentenyltransferase (IPT4),
jasmonoyl-amino acid synthetase (JAR1),
cytoplasmic enolase (LOC2),
tRNA dimethylallyltransferase (IPT2),
tryptophan aminotransferase (TAA1),
fructose-1,6-bisphosphatase (FINS1),
indole-3-acetamide amidohydrolase (AT1G08980),
protoporphyrinogen oxidase (hemY),
lipoate-protein ligase (lplJ),
lipoyl synthase (lipoic acid synthetase) (lipA),
glyceraldehyde-3-phosphate dehydrogenase monomer (GAPDH),
thiazole synthase (thiG),
ThiI,
glycine oxidase monomer (thiO),
retinal dehydrogenase 1 (ALDH1A1),
GTP cyclohydrolase I (folEA),
5S ribosomal RNA (rrfA),
23S ribosomal RNA (rrlA),
16S ribosomal RNA (rrsA),
CAD protein

Unification Links: GO:0005737

Relationship Links: Wikipedia:RELATED-TO:Cytoplasm


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by Pathway Tools version 19.5 (software by SRI International) on Thu Feb 11, 2016, biocyc14.