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discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc Gene-Ontology-Terms Class: GO:0006810 - transport

Synonyms: GO:0015457, GO:0015460

Definition: The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

Parent Classes:
GO:0051234 - establishment of localization

Child Classes:
GO:0006858 - extracellular transport (1) ,
GO:0044765 - single-organism transport (448) ,
GO:0044766 - multi-organism transport (1) ,
GO:0046907 - intracellular transport (6) ,
GO:0071702 - organic substance transport (309) ,
GO:0071705 - nitrogen compound transport (146) ,
GO:0098657 - import into cell (12) ,
GO:1901998 - toxin transport (4)

Parts:
GO:0051049 - regulation of transport (2)

Term Members:
GlvC subunit of predicted PTS permease (pseudogene) ,
sulfur transfer protein (tusE) ,
predicted PTS permease - SgcB subunit ,
predicted carbon-phosphorous lyase subunit (phnK) ,
predicted PTS permease - FrwC subunit ,
putative protein secretion protein for export (gspH) ,
predicted PTS permease - FrvA subunit ,
putative protein secretion protein for export (gspE) ,
lipoprotein required for capsular polysaccharide translocation through the outer membrane (wza) ,
fructose PTS permease - FruB subunit ,
AscF ,
ATP synthase F1 complex - epsilon subunit (atpC) ,
sulfur transfer protein complex, TusD subunit (yheN) ,
putative protein secretion protein (gspM) ,
predicted PTS permease - FrvB subunit ,
putative protein secretion protein for export (gspF) ,
ATP synthase F1 complex - gamma subunit (atpG) ,
RNA polymerase, sigma 19 factor (fecI) ,
ATP synthase F1 complex - beta subunit (atpD) ,
predicted PTS permease - FrwB subunit ,
putative protein secretion protein for export (gspJ) ,
GlvB subunit of predicted PTS permease (pseudogene) ,
putative protein secretion protein for export (gspD) ,
fructose PTS permease - FruA subunit ,
ATP synthase F0 complex - a subunit (atpB) ,
NadR DNA-binding transcriptional repressor and NMN adenylyltransferase ,
anaerobic glycerol-3-phosphate dehydrogenase subunit C (glpC) ,
fumarate reductase membrane protein (frdD) ,
fumarate reductase membrane protein (frdC) ,
trimethylamine N-oxide reductase I ,
dimethyl sulfoxide reductase ,
dimethyl sulfoxide reductase, chain C (dmsC) ,
dimethyl sulfoxide reductase, chain A (dmsA) ,
NADH:ubiquinone oxidoreductase, chain B (nuoB) ,
NADH:ubiquinone oxidoreductase, chain CD (nuoC) ,
NADH:ubiquinone oxidoreductase, membrane subunit N (nuoN) ,
NADH:ubiquinone oxidoreductase, membrane subunit K (nuoK) ,
NADH:ubiquinone oxidoreductase, membrane subunit A (nuoA) ,
protein with low undecaprenyl pyrophosphate phosphatase activity (lpxT) ,
membrane-bound lytic murein transglycosylase F (mltF) ,
nitric oxide dioxygenase (hmp) ,
nitrate reductase A ,
nitrate reductase Z ,
enterochelin esterase (fes) ,
leader peptidase, integral membrane protein (gspO) ,
hydrogenase 1, b-type cytochrome subunit (hyaC) ,
cysteine desulfurase monomer (iscS) ,
riboflavin reductase / FMN reductase (fre) ,
thioredoxin/glutathione peroxidase (btuE) ,
MalX PTS permease ,
L-valine efflux transporter - YgaZ subunit ,
quorum signal AI-2 exporter (tqsA) ,
S-methyl-L-methionine transporter (mmuP) ,
undecaprenyl-phosphate-α-L-Ara4N flippase - ArnF subunit ,
undecaprenyl-phosphate-α-L-Ara4N flippase - ArnE subunit ,
tellurite resistance protein / ethidium efflux transporter (tehA) ,
predicted short chain fatty acid transporter (atoE) ,
Fe2+ transporter FeoB ,
essential cell division protein FtsW; lipid II flippase ,
L-alanine exporter (alaE) ,
nicotinamide riboside transporter (pnuC) ,
adenine transporter (adeQ) ,
LptA ,
LptG ,
LptB ,
LptF ,
manganese export protein (mntP) ,
F- efflux transporter / involved in resistance to camphor-induced chromosome decondensation (crcB) ,
C4 dicarboxylate / C4 monocarboxylate transporter DauA ,
O-antigen flippase (rfbX) ,
galactarate / glucarate / glycerate transporter GarP ,
galactarate / glucarate / glycerate transporter GudP ,
fructoselysine / psicoselysine transporter (frlA) ,
guanine / hypoxanthine transporter GhxP ,
guanine / hypoxanthine transporter GhxQ ,
heavy metal divalent cation transporter ZupT ,
trehalose PTS permease - TreB subunit ,
N-acetylmuramic acid PTS permease / anhydro-N-acetylmuramic acid permease (murP) ,
predicted PTS permease - CmtA subunit ,
predicted PTS permease - CmtB subunit ,
NagE ,
chitobiose PTS permease - ChbB subunit ,
chitobiose PTS permease - ChbC subunit ,
chitobiose PTS permease - ChbA subunit ,
sorbitol PTS permease - SrlE subunit ,
sorbitol PTS permease - SrlB subunit ,
sorbitol PTS permease - SrlA subunit ,
galactitol PTS permease - GatA subunit ,
galactitol PTS permease - GatB subunit ,
galactitol PTS permease - GatC subunit ,
MtlA ,
L-ascorbate PTS permease - UlaA subunit ,
L-ascorbate PTS permease - UlaB subunit ,
Enzyme IIAGlc; Crr ,
glucose PTS permease - PtsG subunit ,
mannose PTS permease - ManX subunit ,
mannose PTS permease - ManY subunit ,
mannose PTS permease - ManZ subunit ,
BglF ,
glutamine ABC transporter - periplasmic binding protein (glnH) ,
glutamine ABC transporter - membrane subunit (glnP) ,
glutamine ABC transporter - ATP binding subunit (glnQ) ,
leucine ABC transporter - periplasmic binding protein (livK) ,
murein tripeptide ABC transporter OppBCDFMppA - periplasmic binding protein ,
murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit (oppF) ,
murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit (oppD) ,
murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit (oppC) ,
murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit (oppB) ,
molybdate ABC transporter - periplasmic binding protein (modA) ,
molybdate ABC transporter - membrane subunit (modB) ,
molybdate ABC transporter - ATP binding subunit (modC) ,
L-arginine ABC transporter - ATP binding subunit (artP) ,
L-arginine ABC transporter - membrane subunit (artM) ,
L-arginine ABC transporter - membrane subunit (artQ) ,
L-arginine ABC transporter - periplasmic binding protein (artJ) ,
K+ transporting ATPase - KdpC subunit ,
K+ transporting ATPase - ATP binding subunit (kdpB) ,
K+ transporting ATPase - K+ channel forming subunit (kdpA) ,
aliphatic sulfonate ABC transporter - ATP binding subunit (ssuB) ,
aliphatic sulfonate ABC transporter - membrane subunit (ssuC) ,
aliphatic sulfonate ABC transporter - periplasmic binding protein (ssuA) ,
phosphonate ABC transporter - periplasmic binding protein (phnD) ,
phosphonate ABC transporter - membrane subunit (phnE_1) ,
phosphonate ABC transporter - ATP binding subunit (phnC) ,
glycine betaine / proline ABC transporter - periplasmic binding protein (proX) ,
glycine betaine / proline ABC transporter - membrane subunit (proW) ,
glycine betaine / proline ABC transporter - ATP binding subunit (proV) ,
protoheme IX ABC transporter - ATP binding subunit (ccmA) ,
protoheme IX ABC transporter - membrane subunit CcmB ,
protoheme IX ABC transporter - membrane subunit CcmD ,
protoheme IX ABC transporter - membrane subunit CcmC ,
glycerol-3-phosphate ABC transporter - periplasmic binding protein (ugpB) ,
glycerol-3-phosphate ABC transporter - membrane subunit (ugpE) ,
glycerol-3-phosphate ABC transporter - membrane subunit (ugpA) ,
glycerol-3-phosphate ABC transporter - ATP binding subunit (ugpC) ,
nickel ABC transporter - periplasmic binding protein (nikA) ,
nickel ABC transporter - membrane subunit (nikC) ,
nickel ABC transporter - membrane subunit (nikB) ,
nickel ABC transporter - ATP binding subunit (nikE) ,
nickel ABC transporter - ATP binding subunit (nikD) ,
galactofuranose / galactopyranose ABC transporter - periplasmic binding protein (ytfQ) ,
galactofuranose / galactopyranose ABC transporter - putative membrane subunit (ytfT) ,
galactofuranose / galactopyranose ABC transporter - putative ATP binding subunit (ytfR) ,
galactofuranose / galactospyranose ABC transporter - putative membrane subunit (yjfF) ,
putrescine ABC transporter - periplasmic binding protein (potF) ,
putrescine ABC transporter - membrane subunit (potI) ,
putrescine ABC transporter - membrane subunit (potH) ,
putrescine ABC transporter - ATP binding subunit (potG) ,
taurine ABC transporter - ATP binding subunit (tauB) ,
taurine ABC transporter - membrane subunit (tauC) ,
taurine ABC transporter - periplasmic binding protein (tauA) ,
ribose ABC transporter - putative periplasmic binding protein (rbsB) ,
ribose ABC transporter - membrane subunit (rbsC) ,
ribose ABC transporter - putative ATP binding subunit (rbsA) ,
dipeptide ABC transporter - periplasmic binding protein (dppA) ,
dipeptide ABC transporter - putative membrane subunit (dppC) ,
dipeptide ABC transporter - putative membrane subunit (dppB) ,
dipeptide ABC transporter - putative ABC binding subunit (dppF) ,
dipeptide ABC transporter - putative ATP binding subunit (dppD) ,
galactose ABC transporter - periplasmic binding protein (mglB) ,
galactose ABC transporter - membrane subunit (mglC) ,
galactose ABC transporter - ATP binding subunit (mglA) ,
ATP-binding lipopolysaccharide transport protein (msbA) ,
glutamate / aspartate ABC transporter - ATP binding subunit (gltL) ,
glutamate / aspartate ABC transporter - membrane subunit (gltJ) ,
glutamate / aspartate ABC transporter - membrane subunit (gltK) ,
glutamate / aspartate ABC transporter - periplasmic binding protein (gltI) ,
xylose ABC transporter - periplasmic binding protein (xylF) ,
xylose ABC transporter - membrane subunit (xylH) ,
xylose ABC transporter - ATP binding subunit (xylG) ,
Cu+ efflux ATPase (copA) ,
branched chain amino acid ABC transporter - periplasmic binding protein (livJ) ,
branched chain amino acid transporter - membrane subunit (livM) ,
branched chain amino acid transporter - membrane subunit (livH) ,
branched chain amino acid transporter - ATP binding subunit (livG) ,
branched chain amino acid ABC transporter - ATP binding subunit (livF) ,
glutathione ABC transporter - membrane subunit (gsiC) ,
glutathione ABC transporter - membrane subunit (gsiD) ,
glutathione ABC transporter - periplasmic binding protein (gsiB) ,
glutathione ABC transporter - ATP binding subunit (gsiA) ,
AI-2 ABC transporter - ATP binding subunit (lsrA) ,
Autoinducer-2 ABC transporter - membrane subunit (lsrC) ,
Autoinducer-2 ABC transporter - membrane subunit (lsrD) ,
arabinose ABC transporter - periplasmic binding protein (araF) ,
arabinose ABC transporter - membrane subunit (araH) ,
arabinose ABC transporter - ATP binding subunit (araG) ,
D-allose ABC transporter - periplasmic binding protein (alsB) ,
D-allose ABC transporter - membrane subunit (alsC) ,
D-allose ABC transporter - ATP binding subunit (alsA) ,
sulfate / thiosulfate ABC transporter - periplasmic binding protein Sbp ,
sulfate / thiosulfate ABC transporter - periplasmic binding protein CysP ,
sulfate / thiosulfate ABC transporter - membrane subunit (cysU) ,
sulfate / thiosulfate ABC transporter - membrane subunit (cysW) ,
sulfate / thiosulfate ABC transporter - ATP binding subunit (cysA) ,
putrescine / spermidine ABC transporter - periplasmic binding protein (potD) ,
putrescine / spermidine ABC transporter - membrane subunit (potC) ,
putrescine / spermidine ABC transporter - membrane subunit (potB) ,
putrescine / spermidine ABC transporter - ATP binding subunit (potA) ,
Zn2+ ABC transporter - periplasmic binding protein (znuA) ,
Zn2+ ABC transporter - membrane subunit (znuB) ,
Zn2+ ABC transporter - ATP binding subunit (znuC) ,
glutathione / L-cysteine efflux transporter - CydC subunit ,
glutathione / L-cysteine efflux transporter - CydD subunit ,
maltose ABC transporter - periplasmic binding protein (malE) ,
maltose ABC transporter - membrane subunit (malG) ,
maltose ABC transporter - membrane subunit (malF) ,
maltose ABC transporter - ATP binding subunit (malK) ,
phosphate ABC transporter - periplasmic binding protein (pstS) ,
phosphate ABC transporter - membrane subunit (pstC) ,
phosphate ABC transporter - membrane subunit (pstA) ,
phosphate ABC transporter - ATP binding subunit (pstB) ,
L-methionine / D-methionine ABC transporter - periplasmic binding protein (metQ) ,
L-methionine / D-methionine ABC transporter - membrane subunit (metI) ,
L-methionine / D-methionine ABC transporter - ATP binding subunit (metN) ,
p-aminobenzoyl glutamate:H+ symporter (abgT) ,
pantothenate:Na+ symporter (panF) ,
uracil:H+ symporter UraA ,
uracil:H+ symporter RutG ,
arabinose efflux transporter (ydeA) ,
sugar / lactose efflux transporter SetA ,
sugar / lactose efflux transporter SetB ,
phenylalanine:H+ symporter PheP ,
outer membrane receptor involved in uptake of ferric dihyroxybenzoylserine (cirA) ,
glutamate:sodium symporter (gltS) ,
glutamic acid:4-aminobutyrate antiporter (gadC) ,
3-hydroxyphenylpropionate / 3-hydroxycinnamate:H+ symporter (mhpT) ,
choline:H+ symporter (betT) ,
spermidine efflux transporter - MdtI subunit ,
spermidine efflux transporter - MdtJ subunit ,
arabinose:H+ symporter (araE) ,
glycerol-3-phosphate:phosphate antiporter (glpT) ,
Zn2+ / Cd2+ / Ni2+ / Cu2+ efflux transporter ZitB ,
rhamnose / lyxose:H+ symporter (rhaT) ,
xylose:H+ symporter (xylE) ,
serine / threonine:Na+ symporter (sstT) ,
cytosine transporter (codB) ,
sodium:H+ antiporter (nhaB) ,
galactonate:H+ symporter (lgoT) ,
nucleoside:H+ symporter NupG ,
acetate / succinate:H+ symporter (satP) ,
K+ : H+ antiporter KefB ,
KefC ,
2,3-diketo-L-gulonate:Na+ symporter - membrane subunit (yiaM) ,
2,3-diketo-L-gulonate:Na+ symporter - membrane subunit (yiaN) ,
2,3-diketo-L-gulonate:Na+ symporter - periplasmic binding protein (yiaO) ,
xanthine:H+ symporter XanP ,
xanthine:H+ symporter XanQ ,
FieF ,
lysine:H+ symporter (lysP) ,
aromatic amino acid exporter (yddG) ,
O-acetylserine/cysteine export protein (eamA) ,
O-Acetylserine/Cysteine Efflux Permease (eamB) ,
TolC monomer ,
enterobactin efflux transporter EntS ,
hexuronate transporter (exuT) ,
shikimate:H+ symporter (shiA) ,
TatA ,
TatE ,
TatC ,
TatB ,
leucine efflux transporter (leuE) ,
EmrE ,
AdiC ,
Na+ / K+:H+ antiporter ChaA ,
multidrug efflux transporter MdfA (multifunctional) ,
multidrug efflux transporter / bile salt:H+ antiporter / Na+:H+ antiporter / K+:H+ antiporter (mdtM) ,
lactose / melibiose:H+ symporter LacY ,
K+ transporter TrkG ,
K+ transporter TrkH ,
serine:H+ symporter SdaC ,
serine / threonine:H+ symporter TdcC ,
L-idonate / 5-ketogluconate / gluconate transporter IdnT ,
gluconate transporter GntU ,
gluconate transporter GntT ,
gluconate / fructuronate transporter GntP ,
adenine:H+ symporter (adeP) ,
ClcA ,
phosphate transporter (pitB) ,
NhaA ,
muropeptide:H+ symporter (ampG) ,
dicarboxylate transporter DcuB ,
dicarboxylate transporter DcuA ,
dicarboxylate transporter DcuC ,
proline:Na+ symporter (putP) ,
copper / silver efflux system - membrane subunit (cusA) ,
copper / silver efflux system - membrane fusion protein (cusB) ,
copper / silver efflux system - outer membrane porin (cusC) ,
hydroxylated, aromatic carboxylic acid efflux transporter - putative membrane subunit (aaeB) ,
hydroxylated, aromatic carboxylic acid efflux transporter - putative membrane fusion protein (aaeA) ,
N-acetylneuraminate:H+ symporter (nanT) ,
4-aminobutyrate:H+ symporter (gabP) ,
melibiose:H+/Na+/Li+ symporter (melB) ,
nitrate / nitrite transporter NarU ,
ArsB ,
purine ribonucleoside efflux transporter (nepI) ,
galactose:H+ symporter (galP) ,
glutamate / aspartate : H+ symporter GltP ,
C4 dicarboxylate / orotate:H+ symporter (dctA) ,
serine / alanine / glycine / cycloserine:H+symporter (cycA) ,
RhtC threonine Rht Transporter ,
urate:H+ symporter (uacT) ,
ActP ,
CaiT ,
nucleoside:H+ symporter NupC ,
branched chain amino acid transporter BrnQ ,
fucose:H+ symporter (fucP) ,
α-ketoglutarate:H+ symporter (kgtP) ,
ProP ,
putrescine:H+ symporter PuuP ,
putrescine:H+ symporter / putrescine:ornithine antiporter PotE ,
putrescine:H+ symporter PlaP ,
citrate:succinate antiporter (citT) ,
dipeptide / tripeptide:H+ symporter DtpB ,
dipeptide / tripeptide:H+ symporter DptC (dtpC) ,
dipeptide:H+ symporter DtpD ,
tripeptide / dipeptide:H+ symporter DtpA ,
hexose-6-phosphate:phosphate antiporter (uhpT) ,
Mn2+ / Fe2+: H+ symporter MntH ,
glycolate / lactate:H+ symporter (glcA) ,
(R)-lactate / (S)-lactate / glycolate:H+ symporter LldP ,
2-dehydro-3-deoxy-D-gluconate:H+ symporter (kdgT) ,
tartrate:succinate antiporter (ttdT) ,
homoserine / homoserine lactone efflux transporter (rhtB) ,
threonine / homoserine efflux transporter (rhtA) ,
xanthosine:H+ symporter XapB ,
tryptophan:H+ symporter TnaB ,
tryptohan / indole:H+ symporter Mtr ,
aromatic amino acid:H+ symporter AroP ,
cadaverine:H+ symporter / lysine:cadaverine antiporter (cadB) ,
vitamin B12 ABC transporter - ATP binding subunit (btuD) ,
vitamin B12 ABC transporter - membrane subunit (btuC) ,
vitamin B12 ABC transporter - periplasmic binding protein (btuF) ,
ferrichrome / phage / antibiotic outer membrane porin FhuA ,
ferric citrate outer membrane porin FecA ,
ferric dicitrate ABC transporter - ATP binding subunit (fecE) ,
ferric dicitrate ABC transporter - membrane subunit (fecC) ,
ferric dicitrate ABC transporter - membrane subunit (fecD) ,
ferric dicitrate ABC transporter - periplasmic binding protein (fecB) ,
ferric enterobactin / colicin B / colicin D outer membrane porin FepA ,
ferric enterobactin ABC transporter - ATP binding subunit (fepC) ,
ferric enterobactin ABC transporter - membrane subunit (fepD) ,
ferric enterobactin ABC transporter - membrane subunit (fepG) ,
ferric enterobactin ABC transporter - periplasmic binding protein (fepB) ,
ferric coprogen outer membrane porin FhuE ,
tonB energy transducing system - ExbD subunit ,
TonB energy transducing system - ExbB subunit ,
TonB energy transducing system - TonB subunit ,
iron (III) hydroxamate ABC transporter - ATP binding subunit (fhuC) ,
iron (III) hydroxamate ABC transporter - membrane subunit (fhuB) ,
iron (III) hydroxamate ABC transporter - periplasmic binding protein (fhuD) ,
OmpC ,
OmpF ,
vitamin B12 / E colicin / bacteriophage BF23 outer membrane porin BtuB ,
FocA ,
K+ transporter Kup ,
K+ channel Kch monomer ,
partially N-deacetylated poly-β-1,6-N-acetyl-D-glucosamine outer membrane porin (pgaA) ,
N-acetylneuraminic acid outer membrane channel (nanC) ,
nucleoside channel; receptor of phage T6 and colicin K (tsx) ,
long-chain fatty acid outer membrane porin; bacteriophage T2 receptor (fadL) ,
nitrite transporter NirC ,
nitrate:nitrite antiporter NarK ,
AmtB ,
LamB ,
GlpF ,
Ni2+ / Co2+ / Mg2+ transporter (corA) ,
AqpZ ,
chitobiose outer membrane porin (chiP) ,
predicted PTS permease - SgcC subunit ,
AgaX (yadI) ,
predicted PTS permease - SgcA subunit ,
putative protein secretion protein for export (gspG) ,
putative protein secretion protein for export (gspK) ,
putative protein secretion protein for export (gspI) ,
putative protein secretion protein for export (gspC) ,
carnitine O-palmitoyltransferase 2 (CPT2) ,
TolB ,
malonyl CoA-acyl carrier protein transacylase (MCAT) ,
mitochondrial carnitine/acylcarnitine carrier protein (SLC25A20) ,
ATP synthase F1 complex - delta subunit (atpH) ,
ATP synthase F1 complex - alpha subunit (atpA) ,
AtpE ,
ATP synthase F0 complex - b subunit (atpF) ,
prostaglandin-D2 synthase (PTGDS) ,
Non-specific lipid-transfer protein (SCP2) ,
interphotoreceptor retinoid-binding protein (RBP3) ,
retinaldehyde-binding protein 1 (RLBP1) ,
cellular retinol-binding protein 2 (RBP2) ,
cellular retinol-binding protein 1 (RBP1) ,
plasma retinol-binding protein (RBP4) ,
putative protein secretion protein for export (gspL) ,
phosphoglucomutase-2 (PGM2) ,
cytochrome aa3-600 quinol oxidase (subunit II) (qoxA) ,
cytochrome aa3-600 quinol oxidase (subunit I) (qoxB) ,
ethylbenzene dioxygenase, ferredoxin component (etbAc)

Unification Links: GO:0006810


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Sun Nov 23, 2014, biocyc14.