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MetaCyc Reactions Class: Protein-Reactions

Summary:
Reactions in which at least one substrate is a protein monomer, a complex containing a protein, or a modified protein.

Parent Classes:
Macromolecule Reactions

Child classes:
Protein-Modification Reactions (946) ,
Protein-DNA-Binding-Reactions (0) ,
Protein-Ligand-Binding-Reactions (0)

Instances:
1.6.2.6: 2 ferrileghemoglobin + NAD(P)H = 2 ferroleghemoglobin + NAD(P)+ + H+ ,
1.14.99.29: an [eIF5A-precursor]-deoxyhypusine + an reduced unknown electron acceptor + oxygen → an [eIF5A]-hypusine + an oxidized unknown electron acceptor + H2O ,
2.1.3.10: a malonyl-[holo malonate decarboxylase acyl-carrier protein] + [a biotinylated MadF protein] → an acetyl-[holo malonate decarboxylase acyl-carrier protein] + [a carboxylated biotinylated MadF protein] ,
2.3.2.6: a protein + an L-leucyl-[tRNAleu] = a tRNAleu + L-leucyl-[protein] + H+ ,
2.8.1.7: an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex → a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex ,
2.8.1.7: an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex → a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex ,
3.4.14.12: a peptide with proline in the third position + H2O → a tripeptide with proline at the third position + a peptide ,
3.4.21.42: complement component protein C2 + H2O → complement component protein C2a + complement component protein C2b ,
3.4.21.42: complement component protein C4 + H2O → complement component protein C4a + complement component protein C4b ,
3.4.21.104: complement component protein C4 + H2O → complement component protein C4a + complement component protein C4b ,
3.4.21.104: complement component protein C2 + H2O → complement component protein C2a + complement component protein C2b ,
3.4.21.105: type-1 transmembrane domains + H2O → cleaved type-1 transmembrane domains ,
3.4.21.106: a protein + H2O → a peptide + a peptide ,
3.4.21.107: a protein + H2O → a peptide + a peptide ,
3.4.21.109: a protein + H2O → a peptide + a peptide ,
3.4.21.110: a C5a anaphylatoxin + H2O → a cleaved C5a anaphylatoxin (inactivated) ,
3.4.21.112: a protein + H2O → a peptide + a peptide ,
3.4.21.113: an NS3-NS4A-NS4B-NS5A-NS5B-polyprotein + H2O → an NS5B protein + an NS5A protein + an NS4B protein + an NS4A protein + an NS3 polyprotein peptidase ,
3.4.21.114: an Equine arteritis virus replicase polyprotein 1a + H2O → an Equine arteritis virus non-structural protein 12 + an Equine arteritis virus non-structural protein 11 + an Equine arteritis virus RNA-directed RNA polymerase + an Equine arteritis virus helicase ,
3.4.21.114: an Equine arteritis virus replicase polyprotein 1ab + H2O → an Equine arteritis virus non-structural protein 8 + an Equine arteritis virus non-structural protein 7 + an Equine arteritis virus non-structural protein 6 + an Equine arteritis virus non-structural protein 5 + an Equine arteritis virus non-structural protein 12 + an Equine arteritis virus non-structural protein 11 + an Equine arteritis virus RNA-directed RNA polymerase + an Equine arteritis virus helicase ,
3.4.21.115: an IPNV structural polyprotein pVP2-VP4-VP3 + H2O → an IPNV protease VP4 + an IPNV capsid assembly protein VP3 + an IPNV capsid protein pVP2 ,
3.4.21.116: a SpoIVB peptidase Precursor + H2O → a SpoIVB peptidase ,
3.4.21.117: a protein + H2O → a peptide + a peptide ,
3.4.21.118: a protein + H2O → a peptide + a peptide ,
3.4.21.119: a renin-2 precursor + H2O → a renin-2 light chain + a renin-2 heavy chain ,
3.4.22.49: a RAD21 cohesin subunit + H2O → a peptide + a peptide ,
3.4.22.50: a protein + H2O → a peptide + a peptide ,
3.4.22.51: a protein + H2O → a peptide + a peptide ,
3.4.22.52: a peptide + H2O → 2 a peptide ,
3.4.22.52: a protein + H2O → a peptide + a peptide ,
3.4.22.53: a peptide + H2O → 2 a peptide ,
3.4.22.66: a Norovirus ORF1 protein + H2O → a protein p48 + an NTPase + a protein p22 + a 3C-like protease + an RNA-directed RNA polymerase ,
3.4.22.67: a protein + H2O → a peptide + a peptide ,
3.4.22.68: a small ubiquitin-like modifier (SUMO) propeptide + H2O → a mature small ubiquitin-like modifier (SUMO) peptide ,
3.4.22.69: a protein with sequence TSAVLQSGFRK-NH2 + H2O → a protein with-sequence TSAVLQ + a protein with sequence SGFRK-NH2 ,
3.4.22.69: a protein with sequence SGVTFQGKFKK + H2O → a protein with sequence SGVFTQ + a protein with sequence GKFKK ,
3.4.23.45: a β-amyloid precursor protein + H2O → a β-cleaved soluble APP peptide + a β-cleaved C-terminal membrane-associated APP peptide ,
3.4.23.46: a β-amyloid precursor protein + H2O → a β-cleaved soluble APP peptide + a β-cleaved C-terminal membrane-associated APP peptide ,
3.4.23.48: a Glu-plasminogen + H2O → a plasmin + a peptide ,
3.4.24.83: a protein + H2O → a peptide + a peptide ,
3.4.24.85: a protein + H2O → a peptide + a peptide ,
3.4.24.86: a TNF-α precursor + H2O → an active TNF-α ,
3.4.24.87: a von willebrand factor + H2O → a degraded product of von willebrand factor ,
3.4.25.1: a protein + H2O → a peptide + a peptide ,
3.6.3.48: an α factor[cytosol] + ATP + H2O ↔ an α factor[extracellular space] + ADP + phosphate ,
5.1.2.-: a (3R)-all-trans-3-hydroxyretinol-[retinoid-binding protein] → a (3S)-all-trans-3-hydroxyretinol-[retinoid-binding protein] ,
5.3.4.1: a protein with incorrect disulfide bonds ↔ a protein with correct disulfide bonds ,
5.3.4.1: a protein = a peptide + a peptide ,
α-N-acetyl-D-glucosaminyl-β-D-glucosyluronate-(1->3)-α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein] → heparosan-[core protein] ,
a reduced cytochrome c554 + an oxidized c-type cytochrome → an oxidized cytochrome c554 + a reduced c-type cytochrome ,
a protein with reduced sulfide groups ↔ a protein with oxidized disulfide bonds ,
a [cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex + an [Fe-S cluster biosynthesis co-chaperone] → a [co-chaperone]-[scaffold protein-(2Fe-2S)] complex + L-cystein desulfurase ,
an inactive lactyl-CoA dehydratase ↔ a lactyl-CoA dehydratase ,
a [co-chaperone]-[scaffold protein-(2Fe-2S)] complex + an [Fe-S cluster biosynthesis chaperone]-ATP → a [chaperone-ATP]-[co-chaperone]-[scaffold protein-(2Fe-2S)] complex


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 19.0 on Wed Jul 29, 2015, biocyc12.