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MetaCyc Compound: (1,3)-β-xylotriose

Superclasses: all carbohydratesa carbohydratea glycana polysaccharidehemicellulosexylana (1->3)-beta-D-xylana (1->3)-beta-D-xylan oligosaccharide
all carbohydratesa carbohydratea glycanan oligosaccharidea (1->3)-beta-D-xylan oligosaccharide
all carbohydratesa carbohydratea glycanan oligosaccharidea trisaccharide

Chemical Formula: C15H26O13

Molecular Weight: 414.36 Daltons

Monoisotopic Molecular Weight: 414.1373409219 Daltons

(1,3)-β-xylotriose compound structure


InChI: InChI=1S/C15H26O13/c16-4-1-25-14(8(20)7(4)19)28-12-6(18)3-26-15(10(12)22)27-11-5(17)2-24-13(23)9(11)21/h4-23H,1-3H2/t4-,5-,6-,7+,8-,9-,10-,11+,12+,13-,14+,15+/m1/s1


Unification Links: PubChem:52940105

Standard Gibbs Free Energy of Formation (ΔfG in kcal/mol): -153.53087Inferred by computational analysis [Latendresse13]

Reactions known to consume the compound:

(1,3)-β-D-xylan degradation :
a (1->3)-β-D-xylan oligosaccharide + n H2O → n β-D-xylopyranose
a (1->3)-β-D-xylan + n H2O → n+1 a (1->3)-β-D-xylan oligosaccharide

(1,3)-β-D-xylan degradation :
a (1->3)-β-D-xylan + n H2O → n+1 a (1->3)-β-D-xylan oligosaccharide

Not in pathways:
xylan + n H2O → n α-D-xylopyranose

Reactions known to produce the compound:

Not in pathways:
acetylxylan + n H2O → xylan + n acetate

cellulose and hemicellulose degradation (cellulolosome) :
a feruloyl-polysaccharide + H2O → ferulate + a polysaccharide + H+

Not in pathways:
keratan sulfate + H2O → n an oligosaccharide
blood group substance B + H2O → n an oligosaccharide
blood group substance A + H2O → n an oligosaccharide
a sialyloligosaccharide + H2O → an oligosaccharide + N-acetylneuraminate
a 1,2-β-D-glucan + H2O → n an oligosaccharide
a fucoidan + H2O → fucose + a fucose sulfate + an oligosaccharide

In Transport reactions:
an oligosaccharide[extracellular space] + ATP + H2O ↔ an oligosaccharide[cytosol] + ADP + phosphate

Created 12-Apr-2011 by Caspi R, SRI International


Biely85: Biely P. (1985). "Microbial xylanolytic enzymes." Trends in Biotechnology.

deVries01: de Vries RP, Visser J (2001). "Aspergillus enzymes involved in degradation of plant cell wall polysaccharides." Microbiol Mol Biol Rev 65(4);497-522, table of contents. PMID: 11729262

Fukushi86: Fukushi, Y., Maeda, M. (1986). "Purification of xylan from the cell wall of Bryopsis maxima." Botanica Marina 29, 387-390.

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Iriki60: Iriki Y, Suzuki T, Nisizawa K, Miwa T (1960). "Xylan of siphonaceous green algae." Nature 187;82-3. PMID: 13852998

Joseleau92: Joseleau J. P., Comptat J., Ruel K. (1992). "Chemical structure of xylans and their interaction in the plant cell wall." Progress in Biotechnology.

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Lahaye03: Lahaye M, Rondeau-Mouro C, Deniaud E, Buleon A (2003). "Solid-state 13C NMR spectroscopy studies of xylans in the cell wall of Palmaria palmata (L. Kuntze, Rhodophyta)." Carbohydr Res 338(15);1559-69. PMID: 12860427

Latendresse13: Latendresse M. (2013). "Computing Gibbs Free Energy of Compounds and Reactions in MetaCyc."

Mackie59: Mackie, I.M., Percival, E. (1959). "The constitution of xylan from the green seaweed Caulerpa filiformis." J. Chem. Soc. 1151-1158.

Schadel10: Schadel C, Richter A, Blochl A, Hoch G (2010). "Hemicellulose concentration and composition in plant cell walls under extreme carbon source-sink imbalances." Physiol Plant 139(3);241-55. PMID: 20113432

Yamagaki96: Yamagaki, T., Maeda, M., Kabazawa, K., Ishizuka, Y, Nakanishi, H. (1996). "Structures of Caulerpa cell wall microfibril xylan with detection of ?-1,3-xylooligosaccharides as revealed by matrix-assisted laser desorption ionization/time of flight/mass spectrometry." Biosci. Biotech. Biochem. 60, 1222-1228.

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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by Pathway Tools version 19.5 (software by SRI International) on Sat Apr 30, 2016, biocyc14.