|Gene:||HVO_B0027||Accession Number: G-12646 (MetaCyc)|
Species: Haloferax volcanii
The subunit structure of this enzyme has not been reported.
This dehydratase was shown to be essential for α-D-xylopyranose (D-xylose) degradation in the halophilic archaeon Haloferax volcanii. Orthologs with 63% and 56% amino acid sequence identity were found in Haloarcula marismortui and Halorubrum lacusprofundi, respectively. A characterized ortholog in the archaeon Sulfolobus solfataricus was 40% identical and a putative ortholog in the bacterium Caulobacter crescentus CB15 was 18% identical. These enzymes belong to the fumaroylacetoacetate hydrolase superfamily [Johnsen09].
DNA microarray analyses showed that the transcription of this gene was highly up-regulated by growth on α-D-xylopyranose. It formed part of a transcription unit with HVO_B0028 encoding D-xylose dehydrogenase [Johnsen09].
The genome of this organism is composed of a main chromosome of 2.848 Mb, three smaller chromosomes (pHV4, pHV3 and pHV1) and a plasmid pHV2 [Hartman10]. This gene is located on pHV3.
|Map Position: [29,918 -> 30,787]|
Molecular Weight of Polypeptide: 31.862 kD (from nucleotide sequence)
Enzymatic reaction of: 2-keto-3-deoxyxylonate dehydratase
EC Number: 126.96.36.199
The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the Enzyme Commission system.
The reaction is favored in the direction shown.
Hartman10: Hartman AL, Norais C, Badger JH, Delmas S, Haldenby S, Madupu R, Robinson J, Khouri H, Ren Q, Lowe TM, Maupin-Furlow J, Pohlschroder M, Daniels C, Pfeiffer F, Allers T, Eisen JA (2010). "The complete genome sequence of Haloferax volcanii DS2, a model archaeon." PLoS One 5(3);e9605. PMID: 20333302
Johnsen09: Johnsen U, Dambeck M, Zaiss H, Fuhrer T, Soppa J, Sauer U, Schonheit P (2009). "D-xylose degradation pathway in the halophilic archaeon Haloferax volcanii." J Biol Chem 284(40);27290-303. PMID: 19584053
©2014 SRI International, 333 Ravenswood Avenue, Menlo Park, CA 94025-3493