Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
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MetaCyc Enzyme: acetyl-diaminopimelate aminotransferase

Gene: patA Accession Number: G-5083 (MetaCyc)

Species: Bacillus subtilis

Summary:
Even though the enzymatic activity of acetyl-diaminopimelate aminotransferase has been shown experimentally in some Gram-positive bacilli [Sundharadas67], the enzyme has not been purifed. The gene encoding it has been located in the B. subtilis genome by sequence similarity, and by its inclusion in a long LYS-element-regulated lysine biosynthesis operon [Rodionov03].

Unification Links: Entrez-gene:939235

Relationship Links: Entrez-Nucleotide:RELATED-TO:AJ222587

Gene-Reaction Schematic: ?

MultiFun Terms: metabolism biosynthesis of building blocks amino acids lysine
metabolism biosynthesis of macromolecules (cellular constituents)


Enzymatic reaction of: acetyl-diaminopimelate aminotransferase

L-2-acetamido-6-oxoheptanedioate + L-glutamate <=> N-acetyl-L,L-2,6-diaminopimelate + 2-oxoglutarate

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the direction in which it was curated.

The reaction is favored in the direction shown.

In Pathways: lysine biosynthesis II


References

Rodionov03: Rodionov DA, Vitreschak AG, Mironov AA, Gelfand MS (2003). "Regulation of lysine biosynthesis and transport genes in bacteria: yet another RNA riboswitch?." Nucleic Acids Res 31(23);6748-57. PMID: 14627808

Sundharadas67: Sundharadas G, Gilvarg C (1967). "Biosynthesis of alpha,epsilon-diaminopimelic acid in Bacillus megaterium." J Biol Chem 242(17);3983-4. PMID: 4962540


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Sat Dec 20, 2014, biocyc12.