MetaCyc Enzyme: N-acetyl-diaminopimelate deacetylase

Gene: ykuR Accession Number: G-5084 (MetaCyc)

Species: Bacillus subtilis

Even though the enzymatic activity of N-acetyl-diaminopimelate deacetylase has been shown experimentally in some Gram-positive bacilli [Sundharadas67], the enzyme has not been purifed. The gene encoding it has been located in the B. subtilis genome by sequence similarity, and by its inclusion in a long LYS-element-regulated lysine biosynthesis operon [Rodionov03a].

Unification Links: Entrez-gene:938805

Relationship Links: Entrez-Nucleotide:RELATED-TO:AJ222587

Gene-Reaction Schematic: ?

Gene-Reaction Schematic

MultiFun Terms: metabolism biosynthesis of building blocks amino acids lysine
metabolism biosynthesis of macromolecules (cellular constituents)

Enzymatic reaction of: N-acetyl-diaminopimelate deacetylase

EC Number:

N-acetyl-L,L-2,6-diaminopimelate + H2O <=> L,L-diaminopimelate + acetate

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the Enzyme Commission system.

The reaction is favored in the direction shown.

In Pathways: L-lysine biosynthesis II


Rodionov03a: Rodionov DA, Vitreschak AG, Mironov AA, Gelfand MS (2003). "Regulation of lysine biosynthesis and transport genes in bacteria: yet another RNA riboswitch?." Nucleic Acids Res 31(23);6748-57. PMID: 14627808

Sundharadas67: Sundharadas G, Gilvarg C (1967). "Biosynthesis of alpha,epsilon-diaminopimelic acid in Bacillus megaterium." J Biol Chem 242(17);3983-4. PMID: 4962540

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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
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