Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc Taxon: Opisthokonta

Synonyms: opisthokonts, Fungi/Metazoa group

Rank: no rank

Taxonomic lineage: cellular organisms , Eukaryota

Direct sub-taxa of Opisthokonta: Choanoflagellida, environmental samples , Fungi , Metazoa , Nucleariidae and Fonticula group, Opisthokonta incertae sedis

Unification Links: NCBI-Taxonomy:33154


Pathways present in Opisthokonta or one of its sub-taxa (644).
These pathways were observed experimentally in this taxon or one of its sub-taxa:
10-cis-heptadecenoyl-CoA degradation (yeast) ,
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) ,
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) ,
11-cis-3-hydroxyretinal biosynthesis ,
(1,3)-β-D-xylan degradation ,
1,3-propanediol biosynthesis (engineered) ,
(1,4)-β-xylan degradation ,
1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3) ,
1D-myo-inositol hexakisphosphate biosynthesis II (mammalian) ,
(1'S,5'S)-averufin biosynthesis ,
2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA ,
[2Fe-2S] iron-sulfur cluster biosynthesis ,
2-methylbutyrate biosynthesis ,
2-methylcitrate cycle I ,
2-oxobutanoate degradation I ,
2-oxoglutarate decarboxylation to succinyl-CoA ,
2-oxoisovalerate decarboxylation to isobutanoyl-CoA ,
3-dehydroquinate biosynthesis I ,
3-methylbutanol biosynthesis ,
3-phosphoinositide biosynthesis ,
3-phosphoinositide degradation ,
4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) ,
4-aminobutyrate degradation ,
4-aminobutyrate degradation III ,
4-hydroxy-2-nonenal detoxification ,
4-hydroxybenzoate biosynthesis I (eukaryotes) ,
4-hydroxybenzoate biosynthesis II (microbes) ,
4-hydroxymandelate degradation ,
4-hydroxyphenylpyruvate biosynthesis ,
4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) ,
4-methylcatechol degradation (ortho cleavage) ,
5-aminoimidazole ribonucleotide biosynthesis I ,
5-N-acetylardeemin biosynthesis ,
6-gingerol analog biosynthesis ,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I ,
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) ,
acetate conversion to acetyl-CoA ,
acetate formation from acetyl-CoA III (succinate) ,
acetoacetate degradation (to acetyl CoA) ,
acetoin biosynthesis III ,
acetone degradation III (to propane-1,2-diol) ,
acetone degradation I (to methylglyoxal) ,
acetylaszonalenin biosynthesis ,
acetyl-CoA biosynthesis III (from citrate) ,
acyl carrier protein metabolism II (mammalian) ,
adenine and adenosine salvage I ,
adenine and adenosine salvage II ,
adenine and adenosine salvage III ,
adenine and adenosine salvage IV ,
adenosine deoxyribonucleotides de novo biosynthesis ,
adenosine nucleotides degradation II ,
adenosine ribonucleotides de novo biosynthesis ,
aerobic respiration I (cytochrome c) ,
aerobic respiration II (cytochrome c) (yeast) ,
aflatoxins B1 and G1 biosynthesis ,
aflatoxins B2 and G2 biosynthesis ,
aflatrem biosynthesis ,
alanine biosynthesis II ,
alanine biosynthesis III ,
alanine degradation III ,
alkane oxidation ,
alkylnitronates degradation ,
allantoin degradation to glyoxylate I ,
allantoin degradation to ureidoglycolate I (urea producing) ,
allopregnanolone biosynthesis ,
all-trans-decaprenyl diphosphate biosynthesis ,
all-trans-farnesol biosynthesis ,
α-cyclopiazonate biosynthesis ,
α-cyclopiazonate detoxification ,
α-tocopherol degradation ,
ammonia assimilation cycle I ,
ammonia assimilation cycle III ,
anaerobic energy metabolism (invertebrates, cytosol) ,
anaerobic energy metabolism (invertebrates, mitochondrial) ,
anandamide degradation ,
androgen biosynthesis ,
arginine biosynthesis II (acetyl cycle) ,
arginine degradation I (arginase pathway) ,
arginine degradation VI (arginase 2 pathway) ,
arginine degradation XII ,
arsenate detoxification I (glutaredoxin) ,
arsenate detoxification II (glutaredoxin) ,
ascorbate recycling (cytosolic) ,
asparagine biosynthesis I ,
asparagine degradation I ,
asparagine degradation III (mammalian) ,
aspartate biosynthesis ,
aspartate degradation I ,
aspartate degradation II ,
asperlicin E biosynthesis ,
aspirin-triggered lipoxin biosynthesis ,
aspirin triggered resolvin D biosynthesis ,
aspirin triggered resolvin E biosynthesis ,
astaxanthin biosynthesis ,
asterrate biosynthesis ,
atromentin biosynthesis ,
base-degraded thiamin salvage ,
β-alanine biosynthesis IV ,
β-alanine degradation I ,
β-carotene biosynthesis ,
betacyanin biosynthesis (via dopamine) ,
betalamic acid biosynthesis ,
betaxanthin biosynthesis (via dopaxanthin) ,
bile acid biosynthesis, neutral pathway ,
bombykol biosynthesis ,
botrydial biosynthesis ,
brassicicene C biosynthesis ,
bupropion degradation ,
butanol and isobutanol biosynthesis (engineered) ,
C20 prostanoid biosynthesis ,
carbon disulfide oxidation II (aerobic) ,
cardiolipin biosynthesis II ,
carnosine biosynthesis ,
catecholamine biosynthesis ,
catechol degradation III (ortho-cleavage pathway) ,
CDP-diacylglycerol biosynthesis I ,
cellulose degradation II (fungi) ,
cephalosporin C biosynthesis ,
ceramide de novo biosynthesis ,
ceramide phosphoethanolamine biosynthesis ,
chanoclavine I aldehyde biosynthesis ,
chitin biosynthesis ,
chitin degradation to ethanol ,
chlorinated phenols degradation ,
chlorogenic acid degradation ,
cholesterol biosynthesis I ,
cholesterol biosynthesis III (via desmosterol) ,
cholesterol biosynthesis II (via 24,25-dihydrolanosterol) ,
choline degradation I ,
choline degradation II ,
choline degradation IV ,
chondroitin and dermatan biosynthesis ,
chondroitin sulfate biosynthesis ,
chondroitin sulfate biosynthesis (late stages) ,
chondroitin sulfate degradation (metazoa) ,
chorismate biosynthesis from 3-dehydroquinate ,
chorismate biosynthesis I ,
chrysophanol biosynthesis ,
citrulline biosynthesis ,
citrulline-nitric oxide cycle ,
CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis ,
CMP-N-acetylneuraminate biosynthesis I (eukaryotes) ,
CMP-N-glycoloylneuraminate biosynthesis ,
CMP phosphorylation ,
coenzyme A biosynthesis I ,
coenzyme A biosynthesis II (mammalian) ,
coumarins biosynthesis (engineered) ,
creatine biosynthesis ,
creatine-phosphate biosynthesis ,
cyanide detoxification II ,
cyanurate degradation ,
cysteine biosynthesis/homocysteine degradation ,
cysteine biosynthesis III (mammalian) ,
cysteine biosynthesis IV (fungi) ,
deacetylcephalosporin C biosynthesis ,
dehydro-D-arabinono-1,4-lactone biosynthesis ,
δ-carotene biosynthesis ,
dermatan sulfate biosynthesis ,
dermatan sulfate biosynthesis (late stages) ,
dermatan sulfate degradation (metazoa) ,
D-galactose degradation V (Leloir pathway) ,
D-galacturonate degradation III ,
D-glucuronate degradation I ,
dimethylsulfoniopropionate degradation I (cleavage) ,
diphthamide biosynthesis (eukaryotes) ,
D-myo-inositol (1,3,4)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate degradation ,
D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol-5-phosphate metabolism ,
docosahexanoate biosynthesis I ,
docosahexanoate biosynthesis II ,
dolichol and dolichyl phosphate biosynthesis ,
dolichyl-diphosphooligosaccharide biosynthesis ,
dopamine degradation ,
drosopterin and aurodrosopterin biosynthesis ,
D-serine degradation ,
ecdysone and 20-hydroxyecdysone biosynthesis ,
ecdysteroid metabolism (arthropods) ,
eicosapentaenoate biosynthesis III (fungi) ,
eicosapentaenoate biosynthesis II (metazoa) ,
ent-kaurene biosynthesis I ,
ent -kaurene biosynthesis II ,
epoxysqualene biosynthesis ,
ergosterol biosynthesis I ,
ergotamine biosynthesis ,
ergothioneine biosynthesis II (fungi) ,
estradiol biosynthesis II ,
estradiol biosynthesis I (via estrone) ,
ethanol degradation II ,
ethanol degradation IV ,
ethylene biosynthesis III (microbes) ,
ethylene biosynthesis II (microbes) ,
ethylene biosynthesis IV ,
ethylene biosynthesis V (engineered) ,
eumelanin biosynthesis ,
fatty acid α-oxidation II ,
fatty acid α-oxidation III ,
fatty acid β-oxidation I ,
fatty acid β-oxidation III (unsaturated, odd number) ,
fatty acid β-oxidation (peroxisome, yeast) ,
fatty acid β-oxidation VI (peroxisome) ,
fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) ,
fatty acid biosynthesis initiation II ,
fatty acids biosynthesis (yeast) ,
flavin biosynthesis III (fungi) ,
flavin biosynthesis IV (mammalian) ,
fluoroacetate degradation ,
formaldehyde assimilation III (dihydroxyacetone cycle) ,
formaldehyde oxidation II (glutathione-dependent) ,
fructose 2,6-bisphosphate biosynthesis ,
fumigaclavine biosynthesis ,
fumiquinazoline D biosynthesis ,
fumitremorgin A biosynthesis ,
fumitremorgin C biosynthesis ,
furfural degradation ,
fusicoccin A biosynthesis ,
GABA shunt ,
galactose degradation IV ,
γ-glutamyl cycle ,
γ-linolenate biosynthesis II (animals) ,
GDP-glucose biosynthesis ,
GDP-glucose biosynthesis II ,
GDP-L-fucose biosynthesis I (from GDP-D-mannose) ,
GDP-L-fucose biosynthesis II (from L-fucose) ,
GDP-mannose biosynthesis ,
geodin biosynthesis ,
geraniol and nerol degradation ,
geranyl diphosphate biosynthesis ,
geranylgeranyl diphosphate biosynthesis ,
gibberellin biosynthesis IV (Gibberella fujikuroi) ,
ginsenoside degradation II ,
gliotoxin biosynthesis ,
gliotoxin inactivation ,
glucocorticoid biosynthesis ,
gluconeogenesis III ,
glutamate and glutamine biosynthesis ,
glutamate biosynthesis II ,
glutamate biosynthesis III ,
glutamate biosynthesis IV ,
glutamate degradation I ,
glutamate degradation IX (via 4-aminobutyrate) ,
glutamate degradation X ,
glutamate removal from folates ,
glutamine biosynthesis I ,
glutamine degradation I ,
glutaryl-CoA degradation ,
glutathione degradation (DUG pathway - yeast) ,
glutathione-mediated detoxification I ,
glutathione redox reactions I ,
glutathione redox reactions II ,
glycerol-3-phosphate shuttle ,
glycerol degradation I ,
glycerol degradation II ,
glycine betaine degradation I ,
glycine betaine degradation II (mammalian) ,
glycine biosynthesis I ,
glycine biosynthesis II ,
glycine biosynthesis III ,
glycine biosynthesis IV ,
glycine cleavage ,
glycoaminoglycan-protein linkage region biosynthesis ,
glycogen biosynthesis II (from UDP-D-Glucose) ,
glycogen degradation III ,
glycogenolysis II ,
glycolysis I (from glucose 6-phosphate) ,
glycolysis VI (metazoan) ,
guaiacylglycerol-β-guaiacyl ether degradation ,
guanine and guanosine salvage ,
guanosine deoxyribonucleotides de novo biosynthesis I ,
guanosine nucleotides degradation II ,
guanosine nucleotides degradation III ,
guanosine ribonucleotides de novo biosynthesis ,
heme biosynthesis I (aerobic) ,
heme biosynthesis II (anaerobic) ,
heme degradation ,
heparan sulfate biosynthesis ,
heparan sulfate biosynthesis (late stages) ,
hexaprenyl diphosphate biosynthesis ,
histamine biosynthesis ,
histamine degradation ,
histidine biosynthesis ,
histidine degradation III ,
histidine degradation V ,
histidine degradation VI ,
homocarnosine biosynthesis ,
homocysteine and cysteine interconversion ,
homocysteine biosynthesis ,
homolactic fermentation ,
hydrogen sulfide biosynthesis II (mammalian) ,
hydroxymethylpyrimidine salvage ,
hypusine biosynthesis ,
indole-3-acetate biosynthesis V (bacteria and fungi) ,
inosine-5'-phosphate biosynthesis II ,
inositol pyrophosphates biosynthesis ,
ipsdienol biosynthesis ,
isoleucine degradation I ,
isoleucine degradation II ,
isopenicillin N biosynthesis ,
isoprene biosynthesis II (engineered) ,
itaconate biosynthesis ,
juvenile hormone III biosynthesis I ,
juvenile hormone III biosynthesis II ,
ketogenesis ,
ketolysis ,
lanosterol biosynthesis ,
L-arabinan degradation ,
L-arabinose degradation II ,
L-ascorbate biosynthesis IV ,
L-carnitine biosynthesis ,
L-cysteine degradation I ,
L-cysteine degradation III ,
L-dopachrome biosynthesis ,
L-dopa degradation ,
leucine degradation I ,
leucine degradation III ,
leukotriene biosynthesis ,
linoleate biosynthesis II (animals) ,
lipoate biosynthesis and incorporation (glycine cleavage system, yeast) ,
lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) ,
lipoxin biosynthesis ,
lovastatin biosynthesis ,
L-rhamnose degradation II ,
L-serine degradation ,
lutein biosynthesis ,
lysine biosynthesis IV ,
lysine degradation III ,
lysine degradation II (mammalian) ,
lysine degradation II (pipecolate pathway) ,
lysine degradation IX ,
lysine degradation VII ,
manganese oxidation I ,
mannosyl-glycoprotein N-acetylglucosaminyltransferases ,
melatonin degradation I ,
melatonin degradation II ,
melatonin degradation III ,
meso-butanediol biosynthesis II ,
methanol oxidation to formaldehyde IV ,
methionine biosynthesis III ,
methionine degradation II ,
methionine degradation III ,
methionine degradation I (to homocysteine) ,
methionine salvage cycle III (animals) ,
methionine salvage from homocysteine ,
methylglyoxal degradation I ,
methylglyoxal degradation II ,
methylglyoxal degradation III ,
methylglyoxal degradation V ,
methylglyoxal degradation VI ,
methylglyoxal degradation VII ,
methylglyoxal degradation VIII ,
mevalonate pathway I ,
(-)-microperfuranone biosynthesis ,
mineralocorticoid biosynthesis ,
mitochondrial L-carnitine shuttle ,
molybdenum cofactor biosynthesis ,
monoacylglycerol metabolism (yeast) ,
morphine biosynthesis ,
mRNA capping I ,
mRNA capping II ,
mucin core 1 and core 2 O-glycosylation ,
mucin core 3 and core 4 O-glycosylation ,
myo-inositol biosynthesis ,
myo-inositol degradation I ,
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde ,
NAD biosynthesis II (from tryptophan) ,
NADH repair ,
NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) ,
NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) ,
NAD phosphorylation and dephosphorylation II (mammalian) ,
NAD salvage pathway I ,
NAD salvage pathway III ,
naringenin biosynthesis (engineered) ,
neurosporaxanthin biosynthesis ,
nicotine degradation III ,
nicotine degradation IV ,
nitrate reduction I (denitrification) ,
nitrate reduction V (assimilatory) ,
nitrilotriacetate degradation ,
nitroethane degradation ,
nonaprenyl diphosphate biosynthesis I ,
noradrenaline and adrenaline degradation ,
octanoyl-ACP biosynthesis (mitochondria, yeast) ,
octopamine biosynthesis ,
oleate β-oxidation (isomerase-dependent, yeast) ,
oleate β-oxidation (reductase-dependent, yeast) ,
oleate β-oxidation (thioesterase-dependent, yeast) ,
oleate biosynthesis II (animals and fungi) ,
orcinol degradation ,
ornithine de novo biosynthesis ,
oxalate biosynthesis ,
oxalate degradation IV ,
oxalate degradation V ,
oxidative ethanol degradation III ,
oxidized GTP and dGTP detoxification ,
palmitate biosynthesis I (animals and fungi) ,
paspaline biosynthesis ,
patulin biosynthesis ,
paxilline and diprenylpaxilline biosynthesis ,
penicillin K biosynthesis ,
pentose phosphate pathway (oxidative branch) II ,
phenol degradation I (aerobic) ,
phenylalanine biosynthesis I ,
phenylalanine degradation I (aerobic) ,
phenylalanine degradation II (anaerobic) ,
phenylalanine degradation III ,
phenylalanine degradation IV (mammalian, via side chain) ,
phosphatidylcholine biosynthesis I ,
phosphatidylcholine biosynthesis V ,
phosphatidylcholine resynthesis via glycerophosphocholine ,
phosphatidylethanolamine biosynthesis III ,
phosphatidylglycerol degradation ,
phosphatidylserine biosynthesis I ,
phosphatidylserine biosynthesis II ,
phospholipid remodeling (phosphatidate, yeast) ,
phospholipid remodeling (phosphatidylcholine, yeast) ,
phospholipid remodeling (phosphatidylethanolamine, yeast) ,
phosphopantothenate biosynthesis I ,
phytol degradation ,
pregnenolone biosynthesis ,
progesterone biosynthesis ,
proline biosynthesis I ,
proline degradation ,
propionyl CoA degradation ,
protein citrullination ,
protein O-[N-acetyl]-glucosylation ,
protein ubiquitination ,
PRPP biosynthesis I ,
pulcherrimin biosynthesis ,
purine deoxyribonucleosides degradation ,
purine deoxyribonucleosides salvage ,
purine nucleotides degradation II (aerobic) ,
purine ribonucleosides degradation ,
putrescine biosynthesis I ,
putrescine biosynthesis III ,
putrescine degradation III ,
pyridoxal 5'-phosphate biosynthesis II ,
pyridoxal 5'-phosphate salvage I ,
pyrimidine deoxyribonucleosides degradation ,
pyrimidine deoxyribonucleosides salvage ,
pyrimidine deoxyribonucleotide phosphorylation ,
pyrimidine deoxyribonucleotides biosynthesis from CTP ,
pyrimidine deoxyribonucleotides de novo biosynthesis I ,
pyrimidine deoxyribonucleotides dephosphorylation ,
pyrimidine nucleobases salvage I ,
pyrimidine nucleobases salvage II ,
pyrimidine ribonucleosides degradation ,
pyrimidine ribonucleosides salvage I ,
pyrimidine ribonucleosides salvage II ,
pyrimidine ribonucleosides salvage III ,
pyruvate decarboxylation to acetyl CoA ,
pyruvate fermentation to acetate V ,
pyruvate fermentation to acetate VI ,
pyruvate fermentation to acetate VIII ,
pyruvate fermentation to ethanol I ,
pyruvate fermentation to ethanol II ,
pyruvate fermentation to isobutanol (engineered) ,
pyruvate fermentation to lactate ,
pyruvate fermentation to opines ,
quinate degradation II ,
(R)-acetoin biosynthesis I ,
Rapoport-Luebering glycolytic shunt ,
reactive oxygen species degradation (mammalian) ,
resolvin D biosynthesis ,
resveratrol degradation ,
retinoate biosynthesis I ,
retinoate biosynthesis II ,
retinol biosynthesis ,
rhamnogalacturonan type I degradation I (fungi) ,
rhodoquinone-10 biosynthesis ,
rhodoquinone-9 biosynthesis ,
(R,R)-butanediol biosynthesis ,
(R,R)-butanediol degradation ,
rutin degradation ,
S-adenosyl-L-methionine biosynthesis ,
S-adenosyl-L-methionine cycle II ,
salicylate degradation I ,
salicylate degradation III ,
selenate reduction ,
selenocysteine biosynthesis II (archaea and eukaryotes) ,
senecionine N-oxide biosynthesis ,
serine biosynthesis ,
serotonin and melatonin biosynthesis ,
serotonin degradation ,
siroheme biosynthesis ,
S-methyl-5'-thioadenosine degradation II ,
S-methyl-5-thio-α-D-ribose 1-phosphate degradation ,
sophorolipid biosynthesis ,
sophorolipid degradation ,
spermidine biosynthesis I ,
spermine and spermidine degradation I ,
spermine biosynthesis ,
sphingolipid biosynthesis (mammals) ,
sphingolipid biosynthesis (yeast) ,
sphingolipid recycling and degradation (yeast) ,
sphingomyelin metabolism ,
sphingosine and sphingosine-1-phosphate metabolism ,
(S)-reticuline biosynthesis II ,
stearate biosynthesis I (animals) ,
stearate biosynthesis III (fungi) ,
sterigmatocystin biosynthesis ,
sterol:steryl ester interconversion (yeast) ,
sucrose degradation V (sucrose α-glucosidase) ,
sulfate activation for sulfonation ,
sulfate reduction I (assimilatory) ,
sulfite oxidation IV ,
superpathway NAD/NADP - NADH/NADPH interconversion (yeast) ,
superpathway of 2,3-butanediol biosynthesis ,
superpathway of 4-hydroxybenzoate biosynthesis (yeast) ,
superpathway of adenosine nucleotides de novo biosynthesis I ,
superpathway of aflatoxin biosynthesis ,
superpathway of allantoin degradation in yeast ,
superpathway of anaerobic energy metabolism (invertebrates) ,
superpathway of betalain biosynthesis ,
superpathway of carotenoid biosynthesis ,
superpathway of cholesterol biosynthesis ,
superpathway of citrulline metabolism ,
superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism ,
superpathway of ergosterol biosynthesis I ,
superpathway of ergotamine biosynthesis ,
superpathway of fumitremorgin biosynthesis ,
superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) ,
superpathway of gibberellin GA12 biosynthesis ,
superpathway of guanosine nucleotides de novo biosynthesis I ,
superpathway of heme biosynthesis from glycine ,
superpathway of inositol phosphate compounds ,
superpathway of lipoate biosynthesis and incorporation (PDH, KGDH, GCV, yeast) ,
superpathway of lysine degradation ,
superpathway of melatonin degradation ,
superpathway of methionine biosynthesis (by sulfhydrylation) ,
superpathway of methionine salvage and degradation ,
superpathway of microbial D-galacturonate and D-glucuronate degradation ,
superpathway of NAD biosynthesis in eukaryotes ,
superpathway of penicillin, cephalosporin and cephamycin biosynthesis ,
superpathway of pentose and pentitol degradation ,
superpathway of polyamine biosynthesis II ,
superpathway of purine nucleotide salvage ,
superpathway of purine nucleotides de novo biosynthesis I ,
superpathway of pyrimidine deoxyribonucleoside salvage ,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis ,
superpathway of pyrimidine nucleobases salvage ,
superpathway of pyrimidine ribonucleosides degradation ,
superpathway of pyrimidine ribonucleosides salvage ,
superpathway of pyrimidine ribonucleotides de novo biosynthesis ,
superpathway of seleno-compound metabolism ,
superpathway of serine and glycine biosynthesis I ,
superpathway of sialic acids and CMP-sialic acids biosynthesis ,
superpathway of steroid hormone biosynthesis ,
superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) ,
superpathway of tetrahydrofolate biosynthesis ,
superpathway of thiamin diphosphate biosynthesis III (eukaryotes) ,
superpathway of ubiquinol-6 biosynthesis (eukaryotic) ,
superpathway phosphatidate biosynthesis (yeast) ,
taurine biosynthesis ,
TCA cycle III (animals) ,
TCA cycle II (plants and fungi) ,
terminal O-glycans residues modification ,
terrequinone A biosynthesis ,
tetrahydrobiopterin biosynthesis I ,
tetrahydrobiopterin biosynthesis II ,
tetrahydrofolate biosynthesis ,
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate ,
tetrapyrrole biosynthesis II (from glycine) ,
the visual cycle II (molluscs) ,
the visual cycle (insects) ,
the visual cycle I (vertebrates) ,
thiamin diphosphate biosynthesis IV (eukaryotes) ,
thiamin formation from pyrithiamine and oxythiamine (yeast) ,
thiamin salvage IV (yeast) ,
thiamin triphosphate metabolism ,
thiazole biosynthesis III (eukaryotes) ,
thiosulfate disproportionation III (rhodanese) ,
thiosulfate disproportionation I (thiol-dependent) ,
threonine degradation ,
threonine degradation II ,
threonine degradation IV ,
thymine degradation ,
thyroid hormone biosynthesis ,
thyroid hormone metabolism II (via conjugation and/or degradation) ,
thyroid hormone metabolism I (via deiodination) ,
thyronamine and iodothyronamine metabolism ,
trans-4-hydroxy-L-proline degradation I ,
trans-lycopene biosynthesis I (bacteria) ,
trans, trans-farnesyl diphosphate biosynthesis ,
trehalose biosynthesis I ,
trehalose biosynthesis II ,
trehalose degradation II (trehalase) ,
trehalose degradation IV ,
trehalose degradation V ,
trehalose degradation VI (periplasmic) ,
triacylglycerol biosynthesis ,
triacylglycerol degradation ,
tRNA methylation (yeast) ,
tRNA splicing ,
tryptophan degradation III (eukaryotic) ,
tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ,
tryptophan degradation VIII (to tryptophol) ,
tryptophan degradation XI (mammalian, via kynurenine) ,
tryptophan degradation X (mammalian, via tryptamine) ,
tyrosine biosynthesis I ,
tyrosine biosynthesis IV ,
tyrosine degradation I ,
tyrosine degradation III ,
ubiquinol-10 biosynthesis (eukaryotic) ,
ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) ,
ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic) ,
ubiquinol-6 bypass biosynthesis (eukaryotic) ,
ubiquinol-7 biosynthesis (eukaryotic) ,
ubiquinol-8 biosynthesis (eukaryotic) ,
ubiquinol-9 biosynthesis (eukaryotic) ,
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) ,
UDP-D-galactose biosynthesis ,
UDP-D-xylose biosynthesis ,
UDP-glucose biosynthesis ,
UDP-L-rhamnose biosynthesis ,
UDP-N-acetyl-D-galactosamine biosynthesis I ,
UDP-N-acetyl-D-glucosamine biosynthesis II ,
UMP biosynthesis ,
uracil degradation I (reductive) ,
urate biosynthesis/inosine 5'-phosphate degradation ,
urate degradation to allantoin I ,
urea cycle ,
urea degradation I ,
UTP and CTP de novo biosynthesis ,
UTP and CTP dephosphorylation I ,
UTP and CTP dephosphorylation II ,
valencene and 7-epi-α-selinene biosynthesis ,
valine degradation I ,
valine degradation II ,
versicolorin B biosynthesis ,
very long chain fatty acid biosynthesis I ,
very long chain fatty acid biosynthesis II ,
vitamin D3 biosynthesis ,
wybutosine biosynthesis ,
xylitol degradation ,
xyloglucan degradation I (endoglucanase) ,
xyloglucan degradation II (exoglucanase) ,
xyloglucan degradation III (cellobiohydrolase) ,
xylose degradation II ,
(Z)-9-tricosene biosynthesis ,
zeaxanthin, antheraxanthin and violaxanthin interconversion ,
zeaxanthin biosynthesis ,
zymosterol biosynthesis

Additional pathways which may be present in Opisthokonta and all its sub-taxa (92)
These pathways were inferred using their expected taxonomic range:
2-aminoethylphosphonate biosynthesis ,
acetate formation from acetyl-CoA II ,
acyl-ACP thioesterase pathway ,
acyl-CoA hydrolysis ,
adenine and adenosine salvage II ,
adenosine 5'-phosphoramidate biosynthesis ,
allantoin degradation to ureidoglycolate II (ammonia producing) ,
all trans undecaprenyl diphosphate biosynthesis ,
anthranilate degradation IV (aerobic) ,
arginine degradation V (arginine deiminase pathway) ,
arginine degradation X (arginine monooxygenase pathway) ,
asparagine biosynthesis II ,
beta-carboline biosynthesis ,
bisabolene biosynthesis ,
carotenoid cleavage ,
cellulose biosynthesis ,
ceramide degradation ,
chitin degradation II ,
cis-calamenene related sesquiterpenoids biosynthesis ,
citrulline degradation ,
costunolide biosynthesis ,
dammara-20,24-diene biosynthesis ,
diacylglyceryl-N,N,N-trimethylhomoserine biosynthesis ,
dimethyl sulfoxide degradation ,
D-mannose degradation ,
Entner-Doudoroff pathway I ,
fatty acid activation ,
fatty acid biosynthesis initiation I ,
folate polyglutamylation ,
folate transformations I ,
glucose and glucose-1-phosphate degradation ,
glutathione biosynthesis ,
glutathionylspermidine biosynthesis ,
glycerol degradation V ,
glycogen degradation I ,
glycolysis II (from fructose 6-phosphate) ,
glyoxylate cycle ,
guanine and guanosine salvage II ,
heptaprenyl diphosphate biosynthesis ,
homospermidine biosynthesis ,
isoleucine biosynthesis I (from threonine) ,
itaconate degradation ,
laminaribiose degradation ,
L-cysteine degradation II ,
L-glutamine biosynthesis II (tRNA-dependent) ,
linalool biosynthesis I ,
linalool biosynthesis II ,
lipoate biosynthesis and incorporation I ,
melibiose degradation ,
methylhalides biosynthesis (plants) ,
methyl ketone biosynthesis ,
NAD biosynthesis I (from aspartate) ,
octaprenyl diphosphate biosynthesis ,
palmitoleate biosynthesis II ,
pentose phosphate pathway ,
pentose phosphate pathway (non-oxidative branch) ,
pentose phosphate pathway (oxidative branch) I ,
phenylethanol biosynthesis ,
phosphate acquisition ,
phosphatidylglycerol biosynthesis II (non-plastidic) ,
phosphatidylglycerol biosynthesis I (plastidic) ,
phospholipases ,
plumbagin biosynthesis ,
polyisoprenoid biosynthesis (E. coli) ,
polyvinyl alcohol degradation ,
proline biosynthesis II (from arginine) ,
pseudouridine degradation ,
pyruvate fermentation to acetate VII ,
pyruvate fermentation to butanol II ,
pyruvate fermentation to hexanol ,
raspberry ketone biosynthesis ,
ricinine degradation ,
sciadonate biosynthesis ,
sedoheptulose bisphosphate bypass ,
selinene biosynthesis ,
serine racemization ,
superoxide radicals degradation ,
superpathway of adenosine nucleotides de novo biosynthesis II ,
superpathway of alliin degradation ,
superpathway of asparagine biosynthesis ,
superpathway of dimethylsulfoniopropionate degradation ,
superpathway of glycolysis and Entner-Doudoroff ,
superpathway of leucine, valine, and isoleucine biosynthesis ,
taxadiene biosynthesis (engineered) ,
terminal olefins biosynthesis I ,
terminal olefins biosynthesis II ,
thio-molybdenum cofactor biosynthesis ,
thioredoxin pathway ,
tRNA charging ,
UDP-N-acetyl-D-glucosamine biosynthesis I ,
valine biosynthesis ,
xanthine and xanthosine salvage


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Thu Dec 18, 2014, biocyc13.