Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc Organism: Cucumis melo

Synonyms: muskmelon, Oriental melon, Cucurbita melo L., Cucumis melo var. markuwa Markino

Rank: species

Taxonomic lineage: cellular organisms , Eukaryota , Viridiplantae , Streptophyta , Streptophytina , Embryophyta , Tracheophyta , Euphyllophyta , Spermatophyta , Magnoliophyta , Mesangiospermae , eudicotyledons , Gunneridae , Pentapetalae , rosids , fabids , Cucurbitales , Cucurbitaceae , Benincaseae , Cucumis

Direct sub-taxa of Cucumis melo: Cucumis melo, Cucumis melo

Unification Links: NCBI-Taxonomy:3656


Pathways present in Cucumis melo or one of its sub-taxa (5).
These pathways were observed experimentally in this taxon or one of its sub-taxa:
ethylene biosynthesis I (plants) ,
galactose degradation III ,
phenylalanine biosynthesis (cytosolic, plants) ,
phenylethyl acetate biosynthesis ,
stachyose degradation

Additional pathways which may be present in Cucumis melo and all its sub-taxa (860)
These pathways were inferred using their expected taxonomic range:
(+)-camphor biosynthesis ,
(+)-secoisolariciresinol diglucoside biosynthesis ,
(1,4)-β-xylan degradation ,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants) ,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) ,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) ,
2,3-cis-flavanols biosynthesis ,
2,3-trans-flavanols biosynthesis ,
2,4,6-trinitrotoluene degradation ,
26,27-dehydrozymosterol metabolism ,
[2Fe-2S] iron-sulfur cluster biosynthesis ,
2-O-acetyl-3-O-trans-coutarate biosynthesis ,
2-oxobutanoate degradation I ,
2-oxoglutarate decarboxylation to succinyl-CoA ,
2-oxoisovalerate decarboxylation to isobutanoyl-CoA ,
3,4-dihydroxymandelonitrile β-D-glucose biosynthesis ,
3,5-dimethoxytoluene biosynthesis ,
3β-hydroxysesquiterpene lactone biosynthesis ,
3-carene biosynthesis ,
3-dehydroquinate biosynthesis I ,
(3E)-4,8-dimethylnona-1,3,7-triene biosynthesis ,
3-methylthiopropanoate biosynthesis ,
3-phosphoinositide biosynthesis ,
3-phosphoinositide degradation ,
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis ,
4-aminobenzoate biosynthesis ,
4-aminobutyrate degradation ,
4-aminobutyrate degradation IV ,
4-hydroxybenzoate biosynthesis I (eukaryotes) ,
4-hydroxybenzoate biosynthesis IV ,
4-hydroxybenzoate biosynthesis V ,
4-hydroxycoumarin and dicoumarol biosynthesis ,
4-hydroxyphenylpyruvate biosynthesis ,
5-aminoimidazole ribonucleotide biosynthesis I ,
5-deoxystrigol biosynthesis ,
6'-deoxychalcone metabolism ,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I ,
9-lipoxygenase and 9-allene oxide synthase pathway ,
9-lipoxygenase and 9-hydroperoxide lyase pathway ,
abscisic acid biosynthesis ,
abscisic acid biosynthesis shunt ,
abscisic acid glucose ester biosynthesis ,
acacetin biosynthesis ,
acetaldehyde biosynthesis I ,
acetaldehyde biosynthesis II ,
acetoin biosynthesis III ,
acetyl-CoA biosynthesis III (from citrate) ,
acyl-ACP thioesterase pathway ,
acylated cyanidin galactoside biosynthesis ,
acyl carrier protein metabolism II (mammalian) ,
acyl-CoA hydrolysis ,
adenine and adenosine salvage II ,
adenine and adenosine salvage II ,
adenine and adenosine salvage III ,
adenosine 5'-phosphoramidate biosynthesis ,
adenosine deoxyribonucleotides de novo biosynthesis ,
adenosine nucleotides degradation I ,
adenosine nucleotides degradation II ,
adenosine ribonucleotides de novo biosynthesis ,
aerobic respiration I (cytochrome c) ,
aerobic respiration III (alternative oxidase pathway) ,
afrormosin conjugates interconversion ,
ajugose biosynthesis II (galactinol-independent) ,
alanine biosynthesis II ,
alanine biosynthesis III ,
alanine degradation III ,
alanine degradation II (to D-lactate) ,
alkane biosynthesis II ,
alkane oxidation ,
allantoin degradation to glyoxylate II ,
allantoin degradation to glyoxylate III ,
allantoin degradation to ureidoglycolate II (ammonia producing) ,
allantoin degradation to ureidoglycolate I (urea producing) ,
all-trans-decaprenyl diphosphate biosynthesis ,
all-trans-farnesol biosynthesis ,
all trans undecaprenyl diphosphate biosynthesis ,
aloesone biosynthesis I ,
α-amyrin biosynthesis ,
α-eleostearic acid biosynthesis ,
α-linolenate biosynthesis ,
ammonia assimilation cycle I ,
ammonia assimilation cycle II ,
anthocyanidin 3-malylglucoside biosynthesis (acyl-glucose dependent) ,
anthocyanidin modification (Arabidopsis) ,
anthocyanidin sophoroside metabolism ,
anthocyanin biosynthesis (cyanidin 3-O-glucoside) ,
anthocyanin biosynthesis (delphinidin 3-O-glucoside) ,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside) ,
anthranilate degradation IV (aerobic) ,
apigenin glycosides biosynthesis ,
apigeninidin 5-O-glucoside biosynthesis ,
arabidiol biosynthesis ,
arginine biosynthesis II (acetyl cycle) ,
arginine biosynthesis I (via L-ornithine) ,
arginine degradation I (arginase pathway) ,
arginine degradation V (arginine deiminase pathway) ,
arginine degradation VI (arginase 2 pathway) ,
arginine degradation X (arginine monooxygenase pathway) ,
ascorbate glutathione cycle ,
asparagine biosynthesis I ,
asparagine biosynthesis II ,
asparagine degradation I ,
asparagine degradation II ,
aspartate biosynthesis ,
aspartate degradation I ,
astaxanthin biosynthesis ,
baicalein degradation (hydrogen peroxide detoxification) ,
baicalein metabolism ,
barbaloin biosynthesis ,
baruol biosynthesis ,
benzoate biosynthesis I (CoA-dependent, β-oxidative) ,
benzoate biosynthesis II (CoA-independent, non-β-oxidative) ,
benzoate biosynthesis III (CoA-dependent, non-β-oxidative) ,
benzoyl-β-D-glucopyranose biosynthesis ,
benzoyl-CoA biosynthesis ,
bergamotene biosynthesis I ,
bergamotene biosynthesis II ,
β-alanine biosynthesis I ,
β-alanine biosynthesis II ,
beta-carboline biosynthesis ,
β-carotene biosynthesis ,
β-carotene biosynthesis (engineered) ,
β-caryophyllene biosynthesis ,
β-cubebene biosynthesis ,
β-pyrazole-1-ylalanine biosynthesis ,
betulinate biosynthesis ,
biotin biosynthesis from 8-amino-7-oxononanoate I ,
biotin-carboxyl carrier protein assembly ,
bisabolene biosynthesis ,
bisbenzylisoquinoline alkaloid biosynthesis ,
bixin biosynthesis ,
brassinosteroid biosynthesis I ,
brassinosteroid biosynthesis II ,
C4 photosynthetic carbon assimilation cycle, NAD-ME type ,
C4 photosynthetic carbon assimilation cycle, NADP-ME type ,
caffeoylglucarate biosynthesis ,
calendate biosynthesis ,
callose biosynthesis ,
Calvin-Benson-Bassham cycle ,
(-)-camphor biosynthesis ,
canthaxanthin biosynthesis ,
capsanthin and capsorubin biosynthesis ,
cardiolipin biosynthesis II ,
carotenoid cleavage ,
CDP-diacylglycerol biosynthesis I ,
CDP-diacylglycerol biosynthesis II ,
cellulose biosynthesis ,
ceramide degradation ,
ceramide de novo biosynthesis ,
C-glycosylflavone biosynthesis I ,
C-glycosylflavone biosynthesis II ,
C-glycosylflavone biosynthesis III ,
chitin degradation II ,
chlorogenic acid biosynthesis I ,
chlorogenic acid biosynthesis II ,
chlorogenic acid degradation ,
chlorophyll a biosynthesis I ,
chlorophyll a biosynthesis II ,
chlorophyll a degradation I ,
chlorophyll a degradation II ,
chlorophyll cycle ,
chlorophyllide a biosynthesis I (aerobic, light-dependent) ,
choline biosynthesis I ,
choline biosynthesis II ,
choline biosynthesis III ,
choline degradation I ,
chorismate biosynthesis from 3-dehydroquinate ,
chorismate biosynthesis I ,
chrysoeriol biosynthesis ,
chrysophanol biosynthesis ,
cichoriin interconversion ,
cinnamate esters biosynthesis ,
cis-calamenene related sesquiterpenoids biosynthesis ,
cis-vaccenate biosynthesis ,
cis-zeatin biosynthesis ,
citrulline degradation ,
CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis ,
CMP-KDO biosynthesis II (from D-arabinose 5-phosphate) ,
CMP-N-acetylneuraminate biosynthesis I (eukaryotes) ,
CMP-N-glycoloylneuraminate biosynthesis ,
CMP phosphorylation ,
CO2 fixation into oxaloacetate (anapleurotic) ,
coenzyme A biosynthesis I ,
coniferin metabolism ,
cornusiin E biosynthesis ,
costunolide biosynthesis ,
coumarin biosynthesis (via 2-coumarate) ,
coumarin metabolism (to melilotic acid) ,
coumarins biosynthesis (engineered) ,
crepenynate biosynthesis ,
curcumene biosynthesis ,
curcumin glucoside biosynthesis ,
cuticular wax biosynthesis ,
cutin biosynthesis ,
cyanate degradation ,
cyanide degradation ,
cyanide detoxification I ,
cyanidin 3,7-diglucoside polyacylation biosynthesis ,
cyanidin diglucoside biosynthesis (acyl-glucose dependent) ,
cyclopropane and cyclopropene fatty acid biosynthesis ,
cysteine biosynthesis I ,
cytokinin-O-glucosides biosynthesis ,
cytokinins 7-N-glucoside biosynthesis ,
cytokinins 9-N-glucoside biosynthesis ,
cytokinins degradation ,
dammara-20,24-diene biosynthesis ,
daphnetin modification ,
daphnin interconversion ,
dehydroscoulerine biosynthesis ,
delphinidin diglucoside biosynthesis (acyl-glucose dependent) ,
Δ5-eicosenoate biosynthesis ,
Δ6-hexadecenoate biosynthesis ,
δ-carotene biosynthesis ,
δ-guaiene biosynthesis ,
detoxification of reactive carbonyls in chloroplasts ,
dhurrin biosynthesis ,
dhurrin degradation ,
diacylglycerol biosynthesis (PUFA enrichment in oilseed) ,
diacylglyceryl-N,N,N-trimethylhomoserine biosynthesis ,
DIBOA-glucoside biosynthesis ,
dihydroconiferyl alcohol biosynthesis ,
DIMBOA-glucoside biosynthesis ,
dimethylsulfoniopropionate biosynthesis II (Spartina) ,
dimethylsulfoniopropionate biosynthesis I (Wollastonia) ,
dimethylsulfoniopropionate degradation I (cleavage) ,
dimethyl sulfoxide degradation ,
dimorphecolate biosynthesis ,
diphthamide biosynthesis (eukaryotes) ,
diphyllin biosynthesis ,
divinyl ether biosynthesis I ,
divinyl ether biosynthesis II ,
D-mannose degradation ,
D-myo-inositol (1,3,4)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate degradation ,
D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol-5-phosphate metabolism ,
docosahexanoate biosynthesis I ,
docosahexanoate biosynthesis II ,
dolichyl-diphosphooligosaccharide biosynthesis ,
D-serine degradation ,
D-sorbitol degradation I ,
D-sorbitol degradation II ,
dTDP-L-rhamnose biosynthesis II ,
(E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene biosynthesis ,
ent-kaurene biosynthesis I ,
Entner-Doudoroff pathway I ,
epoxy fatty acid biosynthesis ,
epoxysqualene biosynthesis ,
esculetin biosynthesis ,
esculetin modification ,
esterified suberin biosynthesis ,
ethanol degradation II ,
eudesmol biosynthesis ,
eugenol and isoeugenol biosynthesis ,
eumelanin biosynthesis ,
eupatolitin 3-O-glucoside biosynthesis ,
extended VTC2 cycle ,
farnesene biosynthesis ,
farnesylcysteine salvage pathway ,
fatty acid activation ,
fatty acid α-oxidation I ,
fatty acid β-oxidation III (unsaturated, odd number) ,
fatty acid β-oxidation II (peroxisome) ,
fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) ,
fatty acid biosynthesis initiation I ,
fatty acid biosynthesis (plant mitochondria) ,
fatty acid elongation -- saturated ,
fenchol biosynthesis I ,
fenchone biosynthesis ,
ferulate and sinapate biosynthesis ,
flavin biosynthesis I (bacteria and plants) ,
flavonoid biosynthesis ,
flavonoid biosynthesis (in equisetum) ,
flavonol acylglucoside biosynthesis III - quercetin derivatives ,
flavonol acylglucoside biosynthesis II - isorhamnetin derivatives ,
flavonol acylglucoside biosynthesis I - kaempferol derivatives ,
flavonol biosynthesis ,
fluoroacetate and fluorothreonine biosynthesis ,
folate polyglutamylation ,
folate transformations I ,
folate transformations II ,
formaldehyde oxidation II (glutathione-dependent) ,
free phenylpropanoid acid biosynthesis ,
fructan biosynthesis ,
fructan degradation ,
furaneol biosynthesis ,
furcatin degradation ,
GA12 biosynthesis ,
galactose degradation I (Leloir pathway) ,
gallate biosynthesis ,
gallotannin biosynthesis ,
galloylated catechin biosynthesis ,
γ-coniciene and coniine biosynthesis ,
γ-linolenate biosynthesis I (plants) ,
GDP-glucose biosynthesis ,
GDP-L-fucose biosynthesis I (from GDP-D-mannose) ,
GDP-L-fucose biosynthesis II (from L-fucose) ,
GDP-L-galactose biosynthesis ,
GDP-mannose biosynthesis ,
genistin gentiobioside biosynthesis ,
gentiodelphin biosynthesis ,
geodin biosynthesis ,
geraniol and geranial biosynthesis ,
geranyl acetate biosynthesis ,
geranyl diphosphate biosynthesis ,
geranylgeranyl diphosphate biosynthesis ,
germacrene biosynthesis ,
gibberellin biosynthesis II (early C-3 hydroxylation) ,
gibberellin biosynthesis III (early C-13 hydroxylation) ,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) ,
gibberellin biosynthesis V ,
gibberellin inactivation I (2β-hydroxylation) ,
gibberellin inactivation III (epoxidation) ,
gibberellin inactivation II (methylation) ,
gluconeogenesis I ,
glucose and glucose-1-phosphate degradation ,
glutamate and glutamine biosynthesis ,
glutamate biosynthesis I ,
glutamate biosynthesis IV ,
glutamate biosynthesis V ,
glutamate degradation I ,
glutamate degradation IV ,
glutamate removal from folates ,
glutamine biosynthesis I ,
glutamine biosynthesis III ,
glutamine degradation I ,
glutathione biosynthesis ,
glutathione-mediated detoxification II ,
glutathione redox reactions I ,
glutathione redox reactions II ,
glutathionylspermidine biosynthesis ,
glycerol-3-phosphate shuttle ,
glycerol degradation I ,
glycerol degradation V ,
glycine betaine biosynthesis III (plants) ,
glycine betaine degradation I ,
glycine biosynthesis I ,
glycine biosynthesis III ,
glycine cleavage ,
glycogen degradation I ,
glycogen degradation III ,
glycolipid biosynthesis ,
glycolipid desaturation ,
glycolysis I (from glucose 6-phosphate) ,
glycolysis II (from fructose 6-phosphate) ,
glycolysis IV (plant cytosol) ,
glyoxylate cycle ,
gossypetin metabolism ,
guanine and guanosine salvage II ,
guanine and guanosine salvage III ,
guanosine deoxyribonucleotides de novo biosynthesis I ,
guanosine nucleotides degradation I ,
guanosine nucleotides degradation II ,
heme biosynthesis I (aerobic) ,
heme degradation ,
heptadecane biosynthesis ,
heptaprenyl diphosphate biosynthesis ,
hesperitin glycoside biosynthesis ,
hexaprenyl diphosphate biosynthesis ,
histidine biosynthesis ,
homocysteine and cysteine interconversion ,
homogalacturonan biosynthesis ,
homogalacturonan degradation ,
homolactic fermentation ,
homoserine biosynthesis ,
homospermidine biosynthesis ,
hydroxycinnamate sugar acid ester biosynthesis ,
hydroxycinnamic acid serotonin amides biosynthesis ,
hydroxycinnamic acid tyramine amides biosynthesis ,
hydroxyjasmonate sulfate biosynthesis ,
hydroxylated fatty acid biosynthesis (plants) ,
hydroxymethylpyrimidine salvage ,
hyperxanthone E biosynthesis ,
hypoglycin biosynthesis ,
hypusine biosynthesis ,
indican biosynthesis ,
indigo biosynthesis ,
indole-3-acetate activation I ,
indole-3-acetate activation II ,
indole-3-acetate biosynthesis I ,
indole-3-acetate biosynthesis II ,
indole-3-acetate conjugate biosynthesis II ,
indole-3-acetate degradation I ,
indole-3-acetate degradation II ,
indole-3-acetate degradation III ,
indole-3-acetate degradation IV ,
indole-3-acetate degradation V ,
indole-3-acetate degradation VI ,
indole-3-acetate degradation VII ,
indole-3-acetyl-ester conjugate biosynthesis ,
indole degradation to anthranil and anthranilate ,
inosine-5'-phosphate biosynthesis II ,
inositol pyrophosphates biosynthesis ,
iron reduction and absorption ,
isoflavonoid biosynthesis II ,
isoleucine biosynthesis I ,
isoleucine biosynthesis I (from threonine) ,
isoleucine degradation I ,
isoprene biosynthesis I ,
isoprene biosynthesis II (engineered) ,
isovitexin and isovitexin glycosides biosynthesis ,
jasmonic acid biosynthesis ,
jasmonoyl-amino acid conjugates biosynthesis I ,
jasmonoyl-amino acid conjugates biosynthesis II ,
justicidin B biosynthesis ,
kaempferide triglycoside biosynthesis ,
kaempferol diglycoside biosynthesis (pollen-specific) ,
kaempferol gentiobioside biosynthesis ,
kauralexin biosynthesis ,
(KDO)2-lipid A biosynthesis I ,
KDO transfer to lipid IVA I ,
lactucaxanthin biosynthesis ,
laminaribiose degradation ,
L-ascorbate biosynthesis II (L-gulose pathway) ,
L-ascorbate biosynthesis I (L-galactose pathway) ,
L-ascorbate degradation III ,
L-ascorbate degradation IV ,
L-ascorbate degradation V ,
lawsone biosynthesis ,
L-carnitine biosynthesis ,
L-cysteine degradation II ,
L-dopachrome biosynthesis ,
leucine biosynthesis ,
leucine degradation I ,
leucodelphinidin biosynthesis ,
leucopelargonidin and leucocyanidin biosynthesis ,
L-glutamine biosynthesis II (tRNA-dependent) ,
linalool biosynthesis I ,
linalool biosynthesis II ,
linear furanocoumarin biosynthesis ,
linoleate biosynthesis I (plants) ,
linustatin bioactivation ,
lipid IVA biosynthesis ,
lipoate biosynthesis and incorporation I ,
L-Nδ-acetylornithine biosynthesis ,
L-sorbose degradation ,
lupeol biosynthesis ,
lupinate biosynthesis ,
lutein biosynthesis ,
luteolin biosynthesis ,
luteolin glycosides biosynthesis ,
luteolinidin 5-O-glucoside biosynthesis ,
luteolin triglucuronide biosynthesis ,
luteolin triglucuronide degradation ,
lysine biosynthesis VI ,
lysine degradation II (mammalian) ,
magnoflorine biosynthesis ,
mannitol biosynthesis ,
mannitol degradation II ,
mannosyl-glycoprotein N-acetylglucosaminyltransferases ,
marneral biosynthesis ,
matairesinol biosynthesis ,
melibiose degradation ,
methionine biosynthesis II ,
methionine degradation II ,
methionine degradation I (to homocysteine) ,
methionine salvage cycle I (bacteria and plants) ,
methionine salvage cycle II (plants) ,
methylerythritol phosphate pathway II ,
methylglyoxal degradation II ,
methylglyoxal degradation III ,
methylglyoxal degradation VII ,
methylhalides biosynthesis (plants) ,
methyl indole-3-acetate interconversion ,
methyl ketone biosynthesis ,
methylquercetin biosynthesis ,
mevalonate pathway I ,
mitochondrial L-carnitine shuttle ,
molybdenum cofactor biosynthesis ,
momilactone A biosynthesis ,
monoacylglycerol metabolism (yeast) ,
monolignol glucosides biosynthesis ,
monoterpene biosynthesis ,
myo-inositol biosynthesis ,
myricetin gentiobioside biosynthesis ,
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde ,
NAD biosynthesis I (from aspartate) ,
NAD biosynthesis II (from tryptophan) ,
NADH repair ,
NAD/NADH phosphorylation and dephosphorylation ,
naringenin biosynthesis (engineered) ,
naringenin glycoside biosynthesis ,
neolinustatin bioactivation ,
neoxanthin biosynthesis ,
nevadensin biosynthesis ,
N-glucosylnicotinate metabolism ,
nicotianamine biosynthesis ,
nitrate reduction II (assimilatory) ,
nitric oxide biosynthesis (plants) ,
nonaprenyl diphosphate biosynthesis I ,
nonaprenyl diphosphate biosynthesis II ,
noscapine biosynthesis ,
octanoyl-ACP biosynthesis (mitochondria, yeast) ,
octaprenyl diphosphate biosynthesis ,
o-diquinones biosynthesis ,
oleanolate biosynthesis ,
oleate biosynthesis I (plants) ,
oligomeric urushiol biosynthesis ,
ω-hydroxylation of caprate and laurate ,
ω- hydroxylation of laurate ,
oryzalexin D and E biosynthesis ,
oryzalide A biosynthesis ,
oxalate biosynthesis ,
oxalate degradation IV ,
oxidized GTP and dGTP detoxification ,
oxygenic photosynthesis ,
palmatine biosynthesis ,
palmitate biosynthesis II (bacteria and plants) ,
palmitoleate biosynthesis II ,
pantothenate and coenzyme A biosynthesis III ,
pantothenate and coenzyme A biosynthesis II (plants) ,
papaverine biosynthesis ,
patchoulol biosynthesis ,
pelargonidin conjugates biosynthesis ,
pelargonidin diglucoside biosynthesis (acyl-glucose dependent) ,
pentacyclic triterpene biosynthesis ,
pentagalloylglucose biosynthesis ,
pentaketide chromone biosynthesis ,
pentose phosphate pathway ,
pentose phosphate pathway (non-oxidative branch) ,
pentose phosphate pathway (oxidative branch) I ,
petroselinate biosynthesis ,
phaseic acid biosynthesis ,
phenolic malonylglucosides biosynthesis ,
phenylalanine biosynthesis II ,
phenylalanine degradation V ,
phenylethanol biosynthesis ,
phenylethanol glycoconjugate biosynthesis ,
phenylpropanoid biosynthesis ,
phenylpropanoid biosynthesis, initial reactions ,
phenylpropanoids methylation (ice plant) ,
phloridzin biosynthesis ,
phosphate acquisition ,
phosphate utilization in cell wall regeneration ,
phosphatidate metabolism, as a signaling molecule ,
phosphatidylcholine acyl editing ,
phosphatidylcholine biosynthesis I ,
phosphatidylcholine biosynthesis II ,
phosphatidylcholine biosynthesis III ,
phosphatidylcholine biosynthesis IV ,
phosphatidylcholine resynthesis via glycerophosphocholine ,
phosphatidylethanolamine biosynthesis I ,
phosphatidylethanolamine biosynthesis III ,
phosphatidylglycerol biosynthesis II (non-plastidic) ,
phosphatidylglycerol biosynthesis I (plastidic) ,
phospholipases ,
phospholipid biosynthesis II ,
phospholipid desaturation ,
phospholipid remodeling (phosphatidate, yeast) ,
phospholipid remodeling (phosphatidylcholine, yeast) ,
phospholipid remodeling (phosphatidylethanolamine, yeast) ,
phosphopantothenate biosynthesis I ,
phosphopantothenate biosynthesis II ,
photorespiration ,
photosynthesis light reactions ,
phylloquinol biosynthesis ,
phytate degradation I ,
phytate degradation II ,
phytocassanes biosynthesis, shared reactions ,
phytochelatins biosynthesis ,
phytochromobilin biosynthesis ,
phytol salvage pathway ,
phytyl diphosphate biosynthesis ,
pinitol biosynthesis I ,
pinitol biosynthesis II ,
pinobanksin biosynthesis ,
pinolenic acid and coniferonic acid biosynthesis ,
pinosylvin metabolism ,
plant sterol biosynthesis ,
plastoquinol-9 biosynthesis I ,
plaunotol biosynthesis ,
plumbagin biosynthesis ,
podophyllotoxin and 6-methoxypodophyllotoxin biosynthesis ,
podophyllotoxin glucosides metabolism ,
poly-hydroxy fatty acids biosynthesis ,
polyisoprenoid biosynthesis (E. coli) ,
polymethylated kaempferol biosynthesis ,
polymethylated myricetin biosynthesis (tomato) ,
polymethylated quercetin biosynthesis ,
polymethylated quercetin glucoside biosynthesis II - quercetagetin series (Chrysosplenium) ,
polymethylated quercetin glucoside biosynthesis I - quercetin series (Chrysosplenium) ,
polyvinyl alcohol degradation ,
proanthocyanidin biosynthesis from flavanols ,
proline biosynthesis II (from arginine) ,
proline biosynthesis III ,
proline biosynthesis IV ,
proline degradation ,
propionyl CoA degradation ,
protein O-[N-acetyl]-glucosylation ,
protein ubiquitination ,
PRPP biosynthesis I ,
pseudouridine degradation ,
pterostilbene biosynthesis ,
punicic acid biosynthesis ,
purine deoxyribonucleosides salvage ,
purine nucleotides degradation I (plants) ,
putrescine biosynthesis II ,
putrescine biosynthesis III ,
putrescine biosynthesis IV ,
putrescine degradation IV ,
pyridine nucleotide cycling (plants) ,
pyridoxal 5'-phosphate biosynthesis II ,
pyridoxal 5'-phosphate salvage I ,
pyridoxal 5'-phosphate salvage II (plants) ,
pyrimidine deoxyribonucleosides salvage ,
pyrimidine deoxyribonucleotide phosphorylation ,
pyrimidine deoxyribonucleotides de novo biosynthesis I ,
pyrimidine deoxyribonucleotides dephosphorylation ,
pyrimidine nucleobases salvage I ,
pyrimidine ribonucleosides salvage I ,
pyrimidine ribonucleosides salvage II ,
pyruvate decarboxylation to acetyl CoA ,
pyruvate fermentation to acetate VII ,
pyruvate fermentation to butanol II ,
pyruvate fermentation to ethanol II ,
pyruvate fermentation to hexanol ,
pyruvate fermentation to isobutanol (engineered) ,
pyruvate fermentation to lactate ,
quercetin diglycoside biosynthesis (pollen-specific) ,
quercetin gentiotetraside biosynthesis ,
quercetin glucoside biosynthesis (Allium) ,
quercetin glucoside degradation (Allium) ,
quercetin sulfate biosynthesis ,
raspberry ketone biosynthesis ,
(R)-canadine biosynthesis ,
resveratrol biosynthesis ,
ricinine degradation ,
ricinoleate biosynthesis ,
rosmarinic acid biosynthesis I ,
rosmarinic acid biosynthesis II ,
rubber biosynthesis ,
Rubisco shunt ,
rutin biosynthesis ,
rutin degradation (plants) ,
S-adenosyl-L-methionine biosynthesis ,
S-adenosyl-L-methionine cycle II ,
sakuranetin biosynthesis ,
salicylate biosynthesis I ,
salicylate biosynthesis II ,
salicylate glucosides biosynthesis IV ,
salidroside biosynthesis ,
salvianin biosynthesis ,
salvigenin biosynthesis ,
sanguinarine and macarpine biosynthesis ,
santalene biosynthesis I ,
saponin biosynthesis II ,
saponin biosynthesis III ,
saponin biosynthesis IV ,
sciadonate biosynthesis ,
scopoletin biosynthesis ,
sedoheptulose bisphosphate bypass ,
seed germination protein turnover ,
selenate reduction ,
seleno-amino acid biosynthesis ,
seleno-amino acid detoxification and volatilization I ,
seleno-amino acid detoxification and volatilization II ,
seleno-amino acid detoxification and volatilization III ,
selenocysteine biosynthesis II (archaea and eukaryotes) ,
selinene biosynthesis ,
serine biosynthesis ,
serine racemization ,
serinol biosynthesis ,
serotonin and melatonin biosynthesis ,
sesamin biosynthesis ,
sesquiterpenoid phytoalexins biosynthesis ,
shisonin biosynthesis ,
siroheme biosynthesis ,
S-methyl-5'-thioadenosine degradation I ,
S-methyl-5-thio-α-D-ribose 1-phosphate degradation ,
S-methylmethionine cycle ,
soybean saponin I biosynthesis ,
spermidine biosynthesis I ,
spermidine hydroxycinnamic acid conjugates biosynthesis ,
spermine and spermidine degradation II ,
spermine and spermidine degradation III ,
spermine biosynthesis ,
sphingolipid biosynthesis (plants) ,
sphingomyelin metabolism ,
sporopollenin precursor biosynthesis ,
stachyose biosynthesis ,
starch biosynthesis ,
starch degradation II ,
stearate biosynthesis II (bacteria and plants) ,
sterol:steryl ester interconversion (yeast) ,
steviol biosynthesis ,
steviol glucoside biosynthesis (rebaudioside A biosynthesis) ,
suberin monomers biosynthesis ,
sucrose biosynthesis I (from photosynthesis) ,
sucrose biosynthesis II ,
sucrose degradation III (sucrose invertase) ,
sucrose degradation II (sucrose synthase) ,
sulfate activation for sulfonation ,
sulfate reduction II (assimilatory) ,
sulfite oxidation IV ,
sulfolipid biosynthesis ,
superoxide radicals degradation ,
superpathay of heme biosynthesis from glutamate ,
superpathway of 1D-myo-inositol hexakisphosphate biosynthesis (plants) ,
superpathway of acetyl-CoA biosynthesis ,
superpathway of adenosine nucleotides de novo biosynthesis I ,
superpathway of adenosine nucleotides de novo biosynthesis II ,
superpathway of allantoin degradation in plants ,
superpathway of alliin degradation ,
superpathway of ammonia assimilation (plants) ,
superpathway of anaerobic sucrose degradation ,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside) ,
superpathway of anthocyanin biosynthesis (from delphinidin 3-O-glucoside) ,
superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside) ,
superpathway of asparagine biosynthesis ,
superpathway of benzoxazinoid glucosides biosynthesis ,
superpathway of betalain biosynthesis ,
superpathway of C28 brassinosteroid biosynthesis ,
superpathway of carotenoid biosynthesis ,
superpathway of choline biosynthesis ,
superpathway of citrulline metabolism ,
superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle ,
superpathway of dimethylsulfoniopropionate degradation ,
superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism ,
superpathway of fatty acid biosynthesis II (plant) ,
superpathway of fermentation (Chlamydomonas reinhardtii) ,
superpathway of flavones and derivatives biosynthesis ,
superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) ,
superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) ,
superpathway of gibberellin biosynthesis ,
superpathway of gibberellin GA12 biosynthesis ,
superpathway of glycolysis and Entner-Doudoroff ,
superpathway of glyoxylate cycle and fatty acid degradation ,
superpathway of guanosine nucleotides degradation (plants) ,
superpathway of guanosine nucleotides de novo biosynthesis I ,
superpathway of hydrolyzable tannin biosynthesis ,
superpathway of indole-3-acetate conjugate biosynthesis ,
superpathway of inositol phosphate compounds ,
superpathway of jasmonoyl-amino acid conjugates biosynthesis ,
superpathway of leucine, valine, and isoleucine biosynthesis ,
superpathway of linalool biosynthesis ,
superpathway of lipoxygenase ,
superpathway of lysine degradation ,
superpathway of lysine, threonine and methionine biosynthesis II ,
superpathway of NAD biosynthesis in eukaryotes ,
superpathway of phenylalanine and tyrosine biosynthesis ,
superpathway of phosphatidylcholine biosynthesis ,
superpathway of phylloquinol biosynthesis ,
superpathway of plastoquinol biosynthesis ,
superpathway of polyamine biosynthesis II ,
superpathway of purine nucleotide salvage ,
superpathway of purine nucleotides de novo biosynthesis I ,
superpathway of purines degradation in plants ,
superpathway of pyrimidine deoxyribonucleoside salvage ,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis ,
superpathway of pyrimidine nucleobases salvage ,
superpathway of pyrimidine ribonucleosides salvage ,
superpathway of pyrimidine ribonucleotides de novo biosynthesis ,
superpathway of rosmarinic acid biosynthesis ,
superpathway of scopolin and esculin biosynthesis ,
superpathway of seleno-compound metabolism ,
superpathway of serine and glycine biosynthesis I ,
superpathway of sialic acids and CMP-sialic acids biosynthesis ,
superpathway of tetrahydrofolate biosynthesis ,
superpathway of tetrahydroxyxanthone biosynthesis ,
superpathway of thiamin diphosphate biosynthesis III (eukaryotes) ,
superpathway phosphatidate biosynthesis (yeast) ,
superpathway polymethylated quercetin/quercetagetin glucoside biosynthesis (Chrysosplenium) ,
syringetin biosynthesis ,
t-anethole biosynthesis ,
taxadiene biosynthesis (engineered) ,
taxiphyllin bioactivation ,
taxiphyllin biosynthesis ,
TCA cycle II (plants and fungi) ,
terminal O-glycans residues modification ,
terminal olefins biosynthesis I ,
terminal olefins biosynthesis II ,
ternatin C3 biosynthesis ,
ternatin C5 biosynthesis ,
tetrahydrofolate biosynthesis ,
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate ,
tetrahydroxyxanthone biosynthesis (from 3-hydroxybenzoate) ,
tetrahydroxyxanthone biosynthesis (from benzoate) ,
tetrapyrrole biosynthesis I (from glutamate) ,
thiamin diphosphate biosynthesis IV (eukaryotes) ,
thiamin triphosphate metabolism ,
thiazole biosynthesis III (eukaryotes) ,
thio-molybdenum cofactor biosynthesis ,
thioredoxin pathway ,
thiosulfate disproportionation III (rhodanese) ,
threonine biosynthesis ,
threonine biosynthesis from homoserine ,
thymine degradation ,
trans-cinnamoyl-CoA biosynthesis ,
trans-lycopene biosynthesis II (plants) ,
trans, trans-farnesyl diphosphate biosynthesis ,
trans-zeatin biosynthesis ,
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis ,
triacylglycerol biosynthesis ,
triacylglycerol degradation ,
trichloroethylene degradation ,
trigonelline biosynthesis ,
tRNA charging ,
tRNA methylation (yeast) ,
tRNA splicing ,
tryptophan biosynthesis ,
tryptophan degradation VI (via tryptamine) ,
tuberonate glucoside biosynthesis ,
tyrosine biosynthesis I ,
tyrosine biosynthesis II ,
tyrosine biosynthesis III ,
ubiquinol-10 biosynthesis (eukaryotic) ,
ubiquinol-9 biosynthesis (eukaryotic) ,
UDP-α-D-glucuronate biosynthesis (from myo-inositol) ,
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) ,
UDP-D-apiose biosynthesis (from UDP-D-glucuronate) ,
UDP-D-galactose biosynthesis ,
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate) ,
UDP-D-galacturonate biosynthesis II (from D-galacturonate) ,
UDP-D-xylose biosynthesis ,
UDP-glucose biosynthesis ,
UDP-L-arabinose biosynthesis I (from UDP-xylose) ,
UDP-L-arabinose biosynthesis II (from L-arabinose) ,
UDP-L-rhamnose biosynthesis ,
UDP-N-acetyl-D-glucosamine biosynthesis II ,
UDP-sugars interconversion ,
umbelliferone biosynthesis ,
UMP biosynthesis ,
unsaturated, even numbered fatty acid β-oxidation ,
uracil degradation I (reductive) ,
urate degradation to allantoin I ,
urea cycle ,
urea degradation II ,
ursolate biosynthesis ,
UTP and CTP de novo biosynthesis ,
UTP and CTP dephosphorylation I ,
UTP and CTP dephosphorylation II ,
valencene and 7-epi-α-selinene biosynthesis ,
valine biosynthesis ,
valine degradation I ,
vernolate biosynthesis ,
very long chain fatty acid biosynthesis I ,
very long chain fatty acid biosynthesis II ,
vestitol and sativan biosynthesis ,
vicianin bioactivation ,
violdelphin biosynthesis ,
vitamin E biosynthesis (tocopherols) ,
vitamin E biosynthesis (tocotrienols) ,
vitexin and derivatives biosynthesis ,
volatile benzenoid biosynthesis I (ester formation) ,
volatile cinnamoic ester biosynthesis ,
volatile esters biosynthesis (during fruit ripening) ,
VTC2 cycle ,
wax esters biosynthesis II ,
wogonin metabolism ,
wound-induced proteolysis I ,
wybutosine biosynthesis ,
xanthine and xanthosine salvage ,
xylan biosynthesis ,
xylogalacturonan biosynthesis ,
xyloglucan biosynthesis ,
zealexin biosynthesis ,
zeaxanthin, antheraxanthin and violaxanthin interconversion ,
zeaxanthin biosynthesis


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Sat Nov 22, 2014, BIOCYC14B.