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MetaCyc Taxon: Fungi

Synonyms: fungi, fungi, fungi

Rank: kingdom

Taxonomic lineage: cellular organisms , Eukaryota , Opisthokonta

Direct sub-taxa of Fungi: Blastocladiomycota, Chytridiomycota, Cryptomycota, Dikarya , Entomophthoromycota, environmental samples , Fungi incertae sedis , Glomeromycota , Microsporidia, Mixed fungal DNA libraries, Monoblepharidomycota, mycorrhizal samples , Neocallimastigomycota , unclassified Fungi

Unification Links: NCBI-Taxonomy:4751


Pathways present in Fungi or one of its sub-taxa (421).
These pathways were observed experimentally in this taxon or one of its sub-taxa:
10-cis-heptadecenoyl-CoA degradation (yeast) ,
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) ,
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) ,
(1,3)-β-D-xylan degradation ,
1,3-propanediol biosynthesis (engineered) ,
(1,4)-β-xylan degradation ,
1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3) ,
(1'S,5'S)-averufin biosynthesis ,
2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA ,
[2Fe-2S] iron-sulfur cluster biosynthesis ,
2-methylcitrate cycle I ,
3-dehydroquinate biosynthesis I ,
3-hydroxy-L-homotyrosine biosynthesis ,
3-methylbutanol biosynthesis ,
3-phosphoinositide biosynthesis ,
3-phosphoinositide degradation ,
4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) ,
4-aminobutanoate degradation III ,
4-hydroxybenzoate biosynthesis I (eukaryotes) ,
4-hydroxybenzoate biosynthesis II (microbes) ,
4-hydroxymandelate degradation ,
4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) ,
4-methylcatechol degradation (ortho cleavage) ,
4-methyl-proline biosynthesis ,
5-aminoimidazole ribonucleotide biosynthesis I ,
5-N-acetylardeemin biosynthesis ,
6-gingerol analog biosynthesis ,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I ,
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) ,
acetate conversion to acetyl-CoA ,
acetate formation from acetyl-CoA III (succinate) ,
acetoacetate degradation (to acetyl CoA) ,
acetoin biosynthesis III ,
acetylaszonalenin biosynthesis ,
adenine and adenosine salvage IV ,
adenosine nucleotides degradation II ,
aerobic respiration II (cytochrome c) (yeast) ,
aflatoxins B1 and G1 biosynthesis ,
aflatoxins B2 and G2 biosynthesis ,
aflatrem biosynthesis ,
alkane oxidation ,
alkylnitronates degradation ,
allantoin degradation to glyoxylate I ,
allantoin degradation to ureidoglycolate I (urea producing) ,
all-trans-decaprenyl diphosphate biosynthesis ,
all-trans-farnesol biosynthesis ,
α-cyclopiazonate biosynthesis ,
α-cyclopiazonate detoxification ,
ammonia assimilation cycle I ,
ammonia assimilation cycle III ,
anditomin biosynthesis ,
apicidin biosynthesis ,
apicidin F biosynthesis ,
arachidonate biosynthesis I (lower eukaryotes) ,
arsenate detoxification II (glutaredoxin) ,
asperlicin E biosynthesis ,
aspyridone A biosynthesis ,
astaxanthin biosynthesis (bacteria, fungi, algae) ,
asterrate biosynthesis ,
atromentin biosynthesis ,
aureobasidin A biosynthesis ,
base-degraded thiamin salvage ,
bassianin and desmethylbassianin biosynthesis ,
β-alanine biosynthesis IV ,
β-carotene biosynthesis ,
betacyanin biosynthesis (via dopamine) ,
betalamic acid biosynthesis ,
betaxanthin biosynthesis (via dopaxanthin) ,
botrydial biosynthesis ,
brassicicene C biosynthesis ,
butanol and isobutanol biosynthesis (engineered) ,
catechol degradation III (ortho-cleavage pathway) ,
cellulose degradation II (fungi) ,
cephalosporin C biosynthesis ,
chaetoglobosin A biosynthesis ,
chanoclavine I aldehyde biosynthesis ,
chitin biosynthesis ,
chitin degradation to ethanol ,
chlorinated phenols degradation ,
chlorogenic acid degradation ,
choline degradation II ,
choline degradation IV ,
chorismate biosynthesis from 3-dehydroquinate ,
chorismate biosynthesis I ,
chrysophanol biosynthesis ,
coenzyme A biosynthesis I ,
coumarins biosynthesis (engineered) ,
crepenynate biosynthesis ,
cyanide detoxification II ,
cyanurate degradation ,
deacetylcephalosporin C biosynthesis ,
dechlorogriseofulvin biosynthesis ,
dehydro-D-arabinono-1,4-lactone biosynthesis ,
δ-carotene biosynthesis ,
D-galacturonate degradation III ,
diacylglycerol and triacylglycerol biosynthesis ,
dimethylsulfoniopropanoate degradation I (cleavage) ,
diphthamide biosynthesis (eukaryotes) ,
D-myo-inositol (1,3,4)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate degradation ,
D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol-5-phosphate metabolism ,
docosahexaenoate biosynthesis I (lower eukaryotes) ,
dolichol and dolichyl phosphate biosynthesis ,
echinocandin B biosynthesis ,
ent-kaurene biosynthesis I ,
ent -kaurene biosynthesis II ,
epoxysqualene biosynthesis ,
equisetin biosynthesis ,
ergosterol biosynthesis I ,
ergotamine biosynthesis ,
ergothioneine biosynthesis II (fungi) ,
ethylene biosynthesis III (microbes) ,
ethylene biosynthesis II (microbes) ,
ethylene biosynthesis IV ,
ethylene biosynthesis V (engineered) ,
fatty acid β-oxidation III (unsaturated, odd number) ,
fatty acid β-oxidation (peroxisome, yeast) ,
fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) ,
fatty acid biosynthesis initiation II ,
fatty acids biosynthesis (yeast) ,
ferrichrome A biosynthesis ,
ferrichrome biosynthesis ,
flavin biosynthesis III (fungi) ,
fluoroacetate degradation ,
formaldehyde assimilation III (dihydroxyacetone cycle) ,
formaldehyde oxidation II (glutathione-dependent) ,
fumigaclavine biosynthesis ,
fumiquinazoline D biosynthesis ,
fumitremorgin A biosynthesis ,
fumitremorgin C biosynthesis ,
furfural degradation ,
fusaric acid biosynthesis ,
fusaridione A biosynthesis ,
fusarin C biosynthesis ,
fusicoccin A biosynthesis ,
galactose degradation IV ,
γ-glutamyl cycle ,
γ-linolenate biosynthesis II (animals) ,
GDP-L-fucose biosynthesis I (from GDP-D-mannose) ,
GDP-mannose biosynthesis ,
geodin biosynthesis ,
geraniol and nerol degradation ,
geranyl diphosphate biosynthesis ,
geranylgeranyl diphosphate biosynthesis ,
gibberellin biosynthesis IV (Gibberella fujikuroi) ,
ginsenoside degradation II ,
gliotoxin biosynthesis ,
gliotoxin inactivation ,
glutamate removal from folates ,
glutaryl-CoA degradation ,
glutathione degradation (DUG pathway - yeast) ,
glycerol-3-phosphate shuttle ,
glycerol degradation I ,
glycerol degradation II ,
glycine biosynthesis I ,
glycine biosynthesis II ,
glycine biosynthesis III ,
glycine biosynthesis IV ,
glycine cleavage ,
glycogen biosynthesis II (from UDP-D-Glucose) ,
glycogen degradation II (eukaryotic) ,
glycogen degradation III (via anhydrofructose) ,
glycolysis I (from glucose 6-phosphate) ,
griseofulvin biosynthesis ,
guaiacylglycerol-β-guaiacyl ether degradation ,
guanosine deoxyribonucleotides de novo biosynthesis I ,
guanosine nucleotides degradation II ,
heme biosynthesis I (aerobic) ,
heme biosynthesis II (anaerobic) ,
hexaprenyl diphosphate biosynthesis ,
hydroxymethylpyrimidine salvage ,
icosapentaenoate biosynthesis III (fungi) ,
indole-3-acetate biosynthesis V (bacteria and fungi) ,
inosine-5'-phosphate biosynthesis II ,
inositol pyrophosphates biosynthesis ,
isopenicillin N biosynthesis ,
isoprene biosynthesis II (engineered) ,
itaconate biosynthesis ,
kievitone detoxification ,
L-alanine degradation III ,
lanosterol biosynthesis ,
L-arabinan degradation ,
L-arabinose degradation II ,
L-arginine biosynthesis II (acetyl cycle) ,
L-arginine degradation VI (arginase 2 pathway) ,
L-arginine degradation XII ,
L-asparagine biosynthesis I ,
L-asparagine degradation I ,
L-aspartate degradation I ,
L-carnitine biosynthesis ,
L-cysteine biosynthesis III (from L-homocysteine) ,
L-cysteine biosynthesis IV (fungi) ,
L-dopachrome biosynthesis ,
L-glutamate and L-glutamine biosynthesis ,
L-glutamate biosynthesis III ,
L-glutamate biosynthesis IV ,
L-glutamate degradation I ,
L-glutamate degradation IX (via 4-aminobutanoate) ,
L-glutamine biosynthesis I ,
L-histidine biosynthesis ,
L-homocysteine and L-cysteine interconversion ,
L-homocysteine biosynthesis ,
linoleate biosynthesis II (animals) ,
lipoate biosynthesis and incorporation (glycine cleavage system, yeast) ,
lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) ,
L-isoleucine degradation II ,
L-leucine degradation III ,
L-lysine biosynthesis IV ,
L-lysine degradation III ,
L-lysine degradation IX ,
L-lysine degradation VII ,
L-methionine biosynthesis III ,
L-methionine degradation II ,
L-methionine degradation III ,
L-methionine degradation I (to L-homocysteine) ,
lolitrem B biosynthesis ,
lovastatin biosynthesis ,
L-phenylalanine biosynthesis I ,
L-phenylalanine degradation II (anaerobic) ,
L-phenylalanine degradation III ,
L-proline degradation ,
L-rhamnose degradation II ,
L-threonine degradation IV ,
L-tryptophan degradation III (eukaryotic) ,
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ,
L-tryptophan degradation VIII (to tryptophol) ,
L-tyrosine biosynthesis I ,
L-tyrosine degradation I ,
L-tyrosine degradation III ,
lutein biosynthesis ,
L-valine degradation I ,
L-valine degradation II ,
manganese oxidation I ,
meleagrin biosynthesis ,
meso-butanediol biosynthesis II ,
methanol oxidation to formaldehyde IV ,
methylglyoxal degradation I ,
methylglyoxal degradation II ,
methylglyoxal degradation III ,
methylglyoxal degradation V ,
mevalonate pathway I ,
(-)-microperfuranone biosynthesis ,
monoacylglycerol metabolism (yeast) ,
mRNA capping I ,
myo-inositol degradation I ,
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde ,
NAD biosynthesis II (from tryptophan) ,
NADH repair ,
NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) ,
NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) ,
NAD salvage pathway I ,
NAD salvage pathway III ,
naringenin biosynthesis (engineered) ,
neoxaline biosynthesis ,
neurosporaxanthin biosynthesis ,
nitrate reduction I (denitrification) ,
nitrate reduction V (assimilatory) ,
nitrilotriacetate degradation ,
nitroethane degradation ,
nonaprenyl diphosphate biosynthesis I ,
notoamide C and D biosynthesis ,
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ,
oleate β-oxidation (isomerase-dependent, yeast) ,
oleate β-oxidation (reductase-dependent, yeast) ,
oleate β-oxidation (thioesterase-dependent, yeast) ,
orcinol degradation ,
oxalate biosynthesis ,
oxalate degradation IV ,
oxalate degradation V ,
oxidized GTP and dGTP detoxification ,
palmitate biosynthesis I (animals and fungi) ,
paspaline biosynthesis ,
patulin biosynthesis ,
paxilline and diprenylpaxilline biosynthesis ,
penicillin K biosynthesis ,
peramine biosynthesis ,
phenol degradation I (aerobic) ,
phosphatidylcholine biosynthesis I ,
phosphatidylcholine biosynthesis V ,
phosphatidylcholine resynthesis via glycerophosphocholine ,
phosphatidylglycerol degradation ,
phosphatidylinositol biosynthesis II (eukaryotes) ,
phospholipid remodeling (phosphatidate, yeast) ,
phospholipid remodeling (phosphatidylcholine, yeast) ,
phospholipid remodeling (phosphatidylethanolamine, yeast) ,
phosphopantothenate biosynthesis I ,
propanoyl-CoA degradation II ,
protein N-glycosylation (eukaryotic, high mannose) ,
pterocarpan phytoalexins modification (maackiain, medicarpin, pisatin, phaseollin) ,
pulcherrimin biosynthesis ,
putrescine biosynthesis III ,
pyridoxal 5'-phosphate biosynthesis II ,
pyrimidine deoxyribonucleotide phosphorylation ,
pyrimidine deoxyribonucleotides biosynthesis from CTP ,
pyrimidine deoxyribonucleotides de novo biosynthesis I ,
pyrimidine nucleobases salvage I ,
pyrimidine nucleobases salvage II ,
pyrimidine ribonucleosides salvage II ,
pyrimidine ribonucleosides salvage III ,
pyruvate fermentation to acetate VI ,
pyruvate fermentation to acetate VIII ,
pyruvate fermentation to ethanol I ,
pyruvate fermentation to ethanol II ,
pyruvate fermentation to isobutanol (engineered) ,
quinate degradation II ,
(R)-acetoin biosynthesis I ,
resveratrol degradation ,
rhamnogalacturonan type I degradation I (fungi) ,
roquefortine C biosynthesis ,
(R,R)-butanediol biosynthesis ,
(R,R)-butanediol degradation ,
rutin degradation ,
S-adenosyl-L-methionine biosynthesis ,
salicylate degradation I ,
salicylate degradation III ,
selenate reduction ,
siroheme biosynthesis ,
sophorolipid biosynthesis ,
sophorosyloxydocosanoate deacetylation ,
spermidine biosynthesis I ,
spermine biosynthesis ,
sphingolipid biosynthesis (yeast) ,
sphingolipid recycling and degradation (yeast) ,
stearate biosynthesis I (animals and fungi) ,
stearate biosynthesis III (fungi) ,
stephacidin A biosynthesis ,
sterigmatocystin biosynthesis ,
sterol:steryl ester interconversion (yeast) ,
sulfate activation for sulfonation ,
sulfate reduction I (assimilatory) ,
superpathway NAD/NADP - NADH/NADPH interconversion (yeast) ,
superpathway of 2,3-butanediol biosynthesis ,
superpathway of 4-hydroxybenzoate biosynthesis (yeast) ,
superpathway of adenosine nucleotides de novo biosynthesis I ,
superpathway of aflatoxin biosynthesis ,
superpathway of allantoin degradation in yeast ,
superpathway of betalain biosynthesis ,
superpathway of carotenoid biosynthesis ,
superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism ,
superpathway of ergosterol biosynthesis I ,
superpathway of ergotamine biosynthesis ,
superpathway of fumitremorgin biosynthesis ,
superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) ,
superpathway of gibberellin GA12 biosynthesis ,
superpathway of guanosine nucleotides de novo biosynthesis I ,
superpathway of heme biosynthesis from glycine ,
superpathway of inositol phosphate compounds ,
superpathway of lipoate biosynthesis and incorporation (PDH, KGDH, GCV, yeast) ,
superpathway of L-lysine degradation ,
superpathway of L-methionine biosynthesis (by sulfhydrylation) ,
superpathway of microbial D-galacturonate and D-glucuronate degradation ,
superpathway of NAD biosynthesis in eukaryotes ,
superpathway of penicillin, cephalosporin and cephamycin biosynthesis ,
superpathway of pentose and pentitol degradation ,
superpathway of phosphatidate biosynthesis (yeast) ,
superpathway of purine nucleotides de novo biosynthesis I ,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis ,
superpathway of pyrimidine nucleobases salvage ,
superpathway of pyrimidine ribonucleosides salvage ,
superpathway of roquefortine, meleagrin and neoxaline biosynthesis ,
superpathway of seleno-compound metabolism ,
superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) ,
superpathway of tetrahydrofolate biosynthesis ,
superpathway of thiamin diphosphate biosynthesis III (eukaryotes) ,
superpathway of ubiquinol-6 biosynthesis (eukaryotic) ,
TCA cycle II (plants and fungi) ,
tenellin biosynthesis ,
terrequinone A biosynthesis ,
tetrahydrobiopterin biosynthesis I ,
tetrahydrofolate biosynthesis ,
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate ,
tetrapyrrole biosynthesis II (from glycine) ,
thiamin diphosphate biosynthesis IV (eukaryotes) ,
thiamin formation from pyrithiamine and oxythiamine (yeast) ,
thiamin salvage IV (yeast) ,
thiamin triphosphate metabolism ,
thiazole biosynthesis III (eukaryotes) ,
thiosulfate disproportionation I (thiol-dependent) ,
thymine degradation ,
trans-lycopene biosynthesis I (bacteria) ,
trans, trans-farnesyl diphosphate biosynthesis ,
trehalose biosynthesis I ,
trehalose biosynthesis II ,
trehalose degradation II (trehalase) ,
trehalose degradation IV ,
trehalose degradation V ,
trehalose degradation VI (periplasmic) ,
triacylglycerol degradation ,
tRNA methylation (yeast) ,
tRNA splicing ,
tryptoquialanine biosynthesis ,
ubiquinol-10 biosynthesis (eukaryotic) ,
ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) ,
ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic) ,
ubiquinol-6 bypass biosynthesis (eukaryotic) ,
ubiquinol-7 biosynthesis (eukaryotic) ,
ubiquinol-8 biosynthesis (eukaryotic) ,
ubiquinol-9 biosynthesis (eukaryotic) ,
UDP-galactofuranose biosynthesis ,
UDP-glucose biosynthesis ,
UDP-L-rhamnose biosynthesis ,
UDP-N-acetyl-D-glucosamine biosynthesis II ,
uracil degradation I (reductive) ,
urea degradation I ,
UTP and CTP de novo biosynthesis ,
UTP and CTP dephosphorylation II ,
valencene and 7-epi-α-selinene biosynthesis ,
versicolorin B biosynthesis ,
very long chain fatty acid biosynthesis II ,
viridicatumtoxin biosynthesis ,
wybutosine biosynthesis ,
xylitol degradation ,
xyloglucan degradation I (endoglucanase) ,
xyloglucan degradation II (exoglucanase) ,
xyloglucan degradation III (cellobiohydrolase) ,
xylose degradation II ,
zeaxanthin, antheraxanthin and violaxanthin interconversion ,
zeaxanthin biosynthesis ,
zymosterol biosynthesis

Additional pathways which may be present in Fungi and all its sub-taxa (242)
These pathways were inferred using their expected taxonomic range:
2-aminoethylphosphonate biosynthesis ,
2-oxobutanoate degradation I ,
2-oxoglutarate decarboxylation to succinyl-CoA ,
2-oxoisovalerate decarboxylation to isobutanoyl-CoA ,
3-amino-3-phenylpropanoyl-CoA biosynthesis ,
3-oxoadipate degradation ,
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis ,
4-aminobenzoate biosynthesis ,
4-aminobutanoate degradation I ,
4-aminobutanoate degradation II ,
4-hydroxy-2-nonenal detoxification ,
4-hydroxyphenylpyruvate biosynthesis ,
acetate formation from acetyl-CoA II ,
acyl-ACP thioesterase pathway ,
acyl carrier protein metabolism II (mammalian) ,
acyl-CoA hydrolysis ,
adenine and adenosine salvage I ,
adenine and adenosine salvage II ,
adenine and adenosine salvage III ,
adenine and adenosine salvage VI ,
adenosine 5'-phosphoramidate biosynthesis ,
adenosine deoxyribonucleotides de novo biosynthesis ,
adenosine ribonucleotides de novo biosynthesis ,
aerobic respiration I (cytochrome c) ,
aerobic respiration III (alternative oxidase pathway) ,
aldoxime degradation ,
alkane biosynthesis II ,
allantoin degradation to ureidoglycolate II (ammonia producing) ,
all trans undecaprenyl diphosphate biosynthesis ,
amaranthin biosynthesis ,
anthranilate degradation IV (aerobic) ,
arachidonate biosynthesis IV (8-detaturase) ,
beta-carboline biosynthesis ,
betacyanin biosynthesis ,
betaxanthin biosynthesis ,
betaxanthin biosynthesis (via dopamine) ,
biotin biosynthesis from 8-amino-7-oxononanoate I ,
bisabolene biosynthesis ,
cardiolipin biosynthesis II ,
carotenoid cleavage ,
CDP-diacylglycerol biosynthesis I ,
cellulose biosynthesis ,
ceramide degradation ,
ceramide de novo biosynthesis ,
chitin degradation II ,
cis-calamenene related sesquiterpenoids biosynthesis ,
CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis ,
CMP-N-acetylneuraminate biosynthesis I (eukaryotes) ,
CMP-N-glycoloylneuraminate biosynthesis ,
costunolide biosynthesis ,
dammara-20,24-diene biosynthesis ,
diacylglyceryl-N,N,N-trimethylhomoserine biosynthesis ,
dimethyl sulfoxide degradation ,
D-mannose degradation ,
D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis ,
docosahexaenoate biosynthesis III (mammals) ,
D-serine degradation ,
D-serine metabolism ,
Entner-Doudoroff pathway I ,
ethanol degradation II ,
eumelanin biosynthesis ,
fatty acid biosynthesis initiation I ,
folate polyglutamylation ,
folate transformations I ,
galactose degradation I (Leloir pathway) ,
gallate biosynthesis ,
GDP-glucose biosynthesis ,
GDP-L-fucose biosynthesis II (from L-fucose) ,
geosmin biosynthesis ,
gibberellin inactivation I (2β-hydroxylation) ,
ginsenoside degradation I ,
gluconeogenesis I ,
glucose and glucose-1-phosphate degradation ,
glutaminyl-tRNAgln biosynthesis via transamidation ,
glutathione biosynthesis ,
glutathione-mediated detoxification I ,
glutathione redox reactions I ,
glutathione redox reactions II ,
glutathionylspermidine biosynthesis ,
glycerol degradation V ,
glycine betaine degradation I ,
glycogen degradation I (bacterial) ,
glycolysis II (from fructose 6-phosphate) ,
glyoxylate cycle ,
guanine and guanosine salvage II ,
heme degradation ,
heptadecane biosynthesis ,
heptaprenyl diphosphate biosynthesis ,
homolactic fermentation ,
homospermidine biosynthesis ,
hypusine biosynthesis ,
icosapentaenoate biosynthesis II (metazoa) ,
icosapentaenoate biosynthesis V (Δ8 desaturase) ,
itaconate degradation ,
juniperonate biosynthesis ,
L-alanine biosynthesis II ,
L-alanine biosynthesis III ,
laminaribiose degradation ,
L-arginine degradation V (arginine deiminase pathway) ,
L-arginine degradation X (arginine monooxygenase pathway) ,
L-asparagine biosynthesis II ,
L-aspartate biosynthesis ,
L-aspartate degradation II ,
L-citrulline degradation ,
L-cysteine degradation II ,
L-glutamate biosynthesis I ,
L-glutamate biosynthesis II ,
L-glutamine degradation I ,
L-homoserine biosynthesis ,
linalool biosynthesis I ,
linalool biosynthesis II ,
linuron degradation ,
lipoate biosynthesis and incorporation I ,
lipoate biosynthesis and incorporation II ,
lipoate salvage I ,
L-isoleucine biosynthesis I (from threonine) ,
L-isoleucine degradation I ,
L-leucine biosynthesis ,
L-leucine degradation I ,
L-lysine degradation XI (mammalian) ,
L-Nδ-acetylornithine biosynthesis ,
long-chain fatty acid activation ,
L-phenylalanine biosynthesis II ,
L-phenylalanine degradation I (aerobic) ,
L-proline biosynthesis I ,
L-proline biosynthesis II (from arginine) ,
L-selenocysteine biosynthesis II (archaea and eukaryotes) ,
L-serine biosynthesis ,
L-serine degradation ,
L-threonine biosynthesis ,
L-threonine degradation II ,
L-tryptophan biosynthesis ,
L-tyrosine biosynthesis II ,
L-tyrosine biosynthesis III ,
L-valine biosynthesis ,
mannitol degradation I ,
mannosyl-glycoprotein N-acetylglucosaminyltransferases ,
melibiose degradation ,
methylglyoxal degradation VII ,
methylhalides biosynthesis (plants) ,
methyl ketone biosynthesis ,
mitochondrial L-carnitine shuttle ,
mixed acid fermentation ,
molybdenum cofactor biosynthesis ,
myo-inositol biosynthesis ,
N10-formyl-tetrahydrofolate biosynthesis ,
N-acetylglucosamine degradation I ,
N-acetylglucosamine degradation II ,
NAD biosynthesis I (from aspartate) ,
NAD/NADH phosphorylation and dephosphorylation ,
octane oxidation ,
octaprenyl diphosphate biosynthesis ,
oleate biosynthesis II (animals and fungi) ,
oligomeric urushiol biosynthesis ,
palmitoleate biosynthesis II (plants and bacteria) ,
pectin degradation I ,
pectin degradation II ,
pentose phosphate pathway ,
pentose phosphate pathway (non-oxidative branch) ,
pentose phosphate pathway (oxidative branch) ,
phenylacetate degradation I (aerobic) ,
phenylethanol biosynthesis ,
phosphate acquisition ,
phosphatidylethanolamine biosynthesis I ,
phosphatidylethanolamine biosynthesis II ,
phosphatidylethanolamine biosynthesis III ,
phosphatidylglycerol biosynthesis II (non-plastidic) ,
phosphatidylglycerol biosynthesis I (plastidic) ,
phospholipases ,
plumbagin biosynthesis ,
polyisoprenoid biosynthesis (E. coli) ,
polyvinyl alcohol degradation ,
propanoyl CoA degradation I ,
protein O-[N-acetyl]-glucosylation ,
protein ubiquitylation ,
pseudouridine degradation ,
purine nucleotides degradation II (aerobic) ,
purine ribonucleosides degradation ,
pyridoxal 5'-phosphate salvage I ,
pyrimidine ribonucleosides salvage I ,
pyruvate decarboxylation to acetyl CoA ,
pyruvate fermentation to acetate V ,
pyruvate fermentation to acetate VII ,
pyruvate fermentation to butanol II ,
pyruvate fermentation to hexanol ,
pyruvate fermentation to lactate ,
raspberry ketone biosynthesis ,
reactive oxygen species degradation ,
rhamnogalacturonan type I degradation II (bacteria) ,
ricinine degradation ,
(S)-acetoin biosynthesis ,
S-adenosyl-L-methionine cycle II ,
sciadonate biosynthesis ,
sedoheptulose bisphosphate bypass ,
selinene biosynthesis ,
spermine and spermidine degradation I ,
sphingomyelin metabolism ,
sphingosine and sphingosine-1-phosphate metabolism ,
(S,S)-butanediol degradation ,
superoxide radicals degradation ,
superpathway of 4-aminobutanoate degradation ,
superpathway of adenosine nucleotides de novo biosynthesis II ,
superpathway of Allium flavor precursors ,
superpathway of branched amino acid biosynthesis ,
superpathway of dimethylsulfoniopropanoate degradation ,
superpathway of fatty acid biosynthesis initiation (E. coli) ,
superpathway of glycolysis and Entner-Doudoroff ,
superpathway of L-asparagine biosynthesis ,
superpathway of L-cysteine biosynthesis (mammalian) ,
superpathway of linalool biosynthesis ,
superpathway of L-isoleucine biosynthesis I ,
superpathway of L-serine and glycine biosynthesis I ,
superpathway of L-threonine biosynthesis ,
superpathway of polyamine biosynthesis II ,
superpathway of purine nucleotide salvage ,
superpathway of pyrimidine deoxyribonucleoside salvage ,
superpathway of pyrimidine ribonucleotides de novo biosynthesis ,
superpathway of sialic acids and CMP-sialic acids biosynthesis ,
superpathway of tetrahydrofolate biosynthesis and salvage ,
taxadiene biosynthesis (engineered) ,
taxol biosynthesis ,
terminal O-glycans residues modification ,
terminal olefins biosynthesis I ,
terminal olefins biosynthesis II ,
thio-molybdenum cofactor biosynthesis ,
thioredoxin pathway ,
thiosulfate disproportionation III (rhodanese) ,
tRNA charging ,
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) ,
UDP-D-galactose biosynthesis ,
UDP-D-xylose biosynthesis ,
UDP-N-acetyl-D-galactosamine biosynthesis I ,
UDP-N-acetyl-D-glucosamine biosynthesis I ,
UMP biosynthesis ,
urate degradation to allantoin I ,
urea cycle ,
urea degradation II ,
UTP and CTP dephosphorylation I ,
very long chain fatty acid biosynthesis I ,
wax esters biosynthesis II ,
xanthine and xanthosine salvage ,
xylose degradation I


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 19.0 on Wed Sep 2, 2015, biocyc11.