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BioCyc websites down
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
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BioCyc websites down
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MetaCyc Organism: Penicillium janthinellum

Synonyms: Penicillum janthinellum, Penicillium vitale, CBS 340.48 , CBS 340.48

Rank: species

Taxonomic lineage: cellular organisms , Eukaryota , Opisthokonta , Fungi , Dikarya , Ascomycota , saccharomyceta , Pezizomycotina , leotiomyceta , Eurotiomycetes , Eurotiomycetidae , Eurotiales , Aspergillaceae , Penicillium

Direct sub-taxa of Penicillium janthinellum: Penicillium janthinellum

Unification Links: NCBI-Taxonomy:5079


Pathways present in Penicillium janthinellum or one of its sub-taxa (1).
These pathways were observed experimentally in this taxon or one of its sub-taxa:
heme biosynthesis II (anaerobic)

Additional pathways which may be present in Penicillium janthinellum and all its sub-taxa (606)
These pathways were inferred using their expected taxonomic range:
10-cis-heptadecenoyl-CoA degradation (yeast) ,
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast) ,
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast) ,
(1,3)-β-D-xylan degradation ,
1,3-propanediol biosynthesis (engineered) ,
(1,4)-β-xylan degradation ,
1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3) ,
(1'S,5'S)-averufin biosynthesis ,
26,27-dehydrozymosterol metabolism ,
2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA ,
2-aminoethylphosphonate biosynthesis ,
[2Fe-2S] iron-sulfur cluster biosynthesis ,
2-methylcitrate cycle I ,
2-oxobutanoate degradation I ,
2-oxoglutarate decarboxylation to succinyl-CoA ,
2-oxoisovalerate decarboxylation to isobutanoyl-CoA ,
3-amino-3-phenylpropanoyl-CoA biosynthesis ,
3-dehydroquinate biosynthesis I ,
3-oxoadipate degradation ,
3-phosphoinositide biosynthesis ,
3-phosphoinositide degradation ,
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis ,
4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) ,
4-aminobenzoate biosynthesis ,
4-aminobutyrate degradation III ,
4-hydroxy-2-nonenal detoxification ,
4-hydroxybenzoate biosynthesis I (eukaryotes) ,
4-hydroxybenzoate biosynthesis II (microbes) ,
4-hydroxymandelate degradation ,
4-hydroxyphenylpyruvate biosynthesis ,
4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) ,
4-methylcatechol degradation (ortho cleavage) ,
5-aminoimidazole ribonucleotide biosynthesis I ,
5-N-acetylardeemin biosynthesis ,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I ,
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast) ,
acetate conversion to acetyl-CoA ,
acetate formation from acetyl-CoA II ,
acetate formation from acetyl-CoA III (succinate) ,
acetoacetate degradation (to acetyl CoA) ,
acetoin biosynthesis III ,
acetylaszonalenin biosynthesis ,
acyl-ACP thioesterase pathway ,
acyl carrier protein metabolism II (mammalian) ,
acyl-CoA hydrolysis ,
adenine and adenosine salvage I ,
adenine and adenosine salvage II ,
adenine and adenosine salvage II ,
adenine and adenosine salvage III ,
adenine and adenosine salvage IV ,
adenosine 5'-phosphoramidate biosynthesis ,
adenosine deoxyribonucleotides de novo biosynthesis ,
adenosine nucleotides degradation II ,
adenosine ribonucleotides de novo biosynthesis ,
aerobic respiration I (cytochrome c) ,
aerobic respiration II (cytochrome c) (yeast) ,
aerobic respiration III (alternative oxidase pathway) ,
aflatoxins B1 and G1 biosynthesis ,
aflatoxins B2 and G2 biosynthesis ,
alanine biosynthesis II ,
alanine biosynthesis III ,
alanine degradation III ,
aldoxime degradation ,
alkane biosynthesis II ,
alkane oxidation ,
alkylnitronates degradation ,
allantoin degradation to glyoxylate I ,
allantoin degradation to ureidoglycolate II (ammonia producing) ,
allantoin degradation to ureidoglycolate I (urea producing) ,
all-trans-decaprenyl diphosphate biosynthesis ,
all-trans-farnesol biosynthesis ,
all trans undecaprenyl diphosphate biosynthesis ,
α-cyclopiazonate biosynthesis ,
α-cyclopiazonate detoxification ,
amaranthin biosynthesis ,
ammonia assimilation cycle I ,
ammonia assimilation cycle III ,
anthranilate degradation IV (aerobic) ,
arginine biosynthesis II (acetyl cycle) ,
arginine degradation V (arginine deiminase pathway) ,
arginine degradation VI (arginase 2 pathway) ,
arginine degradation X (arginine monooxygenase pathway) ,
arginine degradation XII ,
arsenate detoxification II (glutaredoxin) ,
asparagine biosynthesis I ,
asparagine biosynthesis II ,
asparagine degradation I ,
aspartate biosynthesis ,
aspartate degradation I ,
aspartate degradation II ,
asperlicin E biosynthesis ,
astaxanthin biosynthesis ,
asterrate biosynthesis ,
atromentin biosynthesis ,
base-degraded thiamin salvage ,
β-alanine biosynthesis IV ,
beta-carboline biosynthesis ,
β-carotene biosynthesis ,
betacyanin biosynthesis ,
betacyanin biosynthesis (via dopamine) ,
betalamic acid biosynthesis ,
betaxanthin biosynthesis ,
betaxanthin biosynthesis (via dopamine) ,
betaxanthin biosynthesis (via dopaxanthin) ,
biotin biosynthesis from 8-amino-7-oxononanoate I ,
bisabolene biosynthesis ,
botrydial biosynthesis ,
brassicicene C biosynthesis ,
butanol and isobutanol biosynthesis (engineered) ,
cardiolipin biosynthesis II ,
carotenoid cleavage ,
catechol degradation III (ortho-cleavage pathway) ,
CDP-diacylglycerol biosynthesis I ,
cellulose biosynthesis ,
cellulose degradation II (fungi) ,
cephalosporin C biosynthesis ,
ceramide degradation ,
ceramide de novo biosynthesis ,
chitin biosynthesis ,
chitin degradation II ,
chitin degradation to ethanol ,
chlorinated phenols degradation ,
chlorogenic acid degradation ,
choline degradation II ,
choline degradation IV ,
chorismate biosynthesis from 3-dehydroquinate ,
chorismate biosynthesis I ,
chrysophanol biosynthesis ,
cis-calamenene related sesquiterpenoids biosynthesis ,
citrulline degradation ,
CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis ,
CMP-N-acetylneuraminate biosynthesis I (eukaryotes) ,
CMP-N-glycoloylneuraminate biosynthesis ,
coenzyme A biosynthesis I ,
costunolide biosynthesis ,
coumarins biosynthesis (engineered) ,
cyanide detoxification II ,
cyanurate degradation ,
cysteine biosynthesis/homocysteine degradation ,
cysteine biosynthesis III (mammalian) ,
cysteine biosynthesis IV (fungi) ,
dammara-20,24-diene biosynthesis ,
deacetylcephalosporin C biosynthesis ,
dehydro-D-arabinono-1,4-lactone biosynthesis ,
δ-carotene biosynthesis ,
D-galacturonate degradation III ,
diacylglyceryl-N,N,N-trimethylhomoserine biosynthesis ,
dimethylsulfoniopropionate degradation I (cleavage) ,
dimethyl sulfoxide degradation ,
diphthamide biosynthesis (eukaryotes) ,
D-mannose degradation ,
D-myo-inositol (1,3,4)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate degradation ,
D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol-5-phosphate metabolism ,
docosahexanoate biosynthesis I ,
docosahexanoate biosynthesis II ,
dolichol and dolichyl phosphate biosynthesis ,
dolichyl-diphosphooligosaccharide biosynthesis ,
D-serine degradation ,
eicosapentaenoate biosynthesis III (fungi) ,
eicosapentaenoate biosynthesis II (metazoa) ,
ent-kaurene biosynthesis I ,
ent -kaurene biosynthesis II ,
Entner-Doudoroff pathway I ,
epoxysqualene biosynthesis ,
ergosterol biosynthesis I ,
ergothioneine biosynthesis II (fungi) ,
ethanol degradation II ,
ethylene biosynthesis III (microbes) ,
ethylene biosynthesis II (microbes) ,
ethylene biosynthesis IV ,
eumelanin biosynthesis ,
fatty acid activation ,
fatty acid β-oxidation III (unsaturated, odd number) ,
fatty acid β-oxidation (peroxisome, yeast) ,
fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) ,
fatty acid biosynthesis initiation I ,
fatty acid biosynthesis initiation II ,
fatty acids biosynthesis (yeast) ,
flavin biosynthesis III (fungi) ,
fluoroacetate degradation ,
folate polyglutamylation ,
folate transformations I ,
formaldehyde assimilation III (dihydroxyacetone cycle) ,
formaldehyde oxidation II (glutathione-dependent) ,
fumiquinazoline D biosynthesis ,
fumitremorgin A biosynthesis ,
fumitremorgin C biosynthesis ,
furfural degradation ,
fusicoccin A biosynthesis ,
galactose degradation I (Leloir pathway) ,
galactose degradation IV ,
gallate biosynthesis ,
γ-glutamyl cycle ,
γ-linolenate biosynthesis II (animals) ,
GDP-glucose biosynthesis ,
GDP-L-fucose biosynthesis I (from GDP-D-mannose) ,
GDP-L-fucose biosynthesis II (from L-fucose) ,
GDP-mannose biosynthesis ,
geodin biosynthesis ,
geosmin biosynthesis ,
geraniol and nerol degradation ,
geranyl diphosphate biosynthesis ,
geranylgeranyl diphosphate biosynthesis ,
gibberellin biosynthesis IV (Gibberella fujikuroi) ,
gibberellin inactivation I (2β-hydroxylation) ,
ginsenoside degradation I ,
ginsenoside degradation II ,
gliotoxin biosynthesis ,
gliotoxin inactivation ,
gluconeogenesis I ,
glucose and glucose-1-phosphate degradation ,
glutamate and glutamine biosynthesis ,
glutamate biosynthesis I ,
glutamate biosynthesis II ,
glutamate biosynthesis III ,
glutamate biosynthesis IV ,
glutamate degradation I ,
glutamate degradation IX (via 4-aminobutyrate) ,
glutamate removal from folates ,
glutamine biosynthesis I ,
glutamine degradation I ,
glutaryl-CoA degradation ,
glutathione biosynthesis ,
glutathione degradation (DUG pathway - yeast) ,
glutathione-mediated detoxification I ,
glutathione redox reactions I ,
glutathione redox reactions II ,
glutathionylspermidine biosynthesis ,
glycerol-3-phosphate shuttle ,
glycerol degradation I ,
glycerol degradation V ,
glycine betaine degradation I ,
glycine biosynthesis I ,
glycine biosynthesis II ,
glycine biosynthesis III ,
glycine biosynthesis IV ,
glycine cleavage ,
glycogen biosynthesis II (from UDP-D-Glucose) ,
glycogen degradation I ,
glycogen degradation III ,
glycogenolysis II ,
glycolysis I (from glucose 6-phosphate) ,
glycolysis II (from fructose 6-phosphate) ,
glyoxylate cycle ,
guaiacylglycerol-β-guaiacyl ether degradation ,
guanine and guanosine salvage II ,
guanosine deoxyribonucleotides de novo biosynthesis I ,
guanosine nucleotides degradation II ,
heme biosynthesis I (aerobic) ,
heme degradation ,
heptadecane biosynthesis ,
heptaprenyl diphosphate biosynthesis ,
hexaprenyl diphosphate biosynthesis ,
histidine biosynthesis ,
homocysteine and cysteine interconversion ,
homocysteine biosynthesis ,
homolactic fermentation ,
homoserine biosynthesis ,
homospermidine biosynthesis ,
hydroxymethylpyrimidine salvage ,
hypusine biosynthesis ,
indole-3-acetate biosynthesis V (bacteria and fungi) ,
inosine-5'-phosphate biosynthesis II ,
inositol pyrophosphates biosynthesis ,
isoleucine biosynthesis I ,
isoleucine biosynthesis I (from threonine) ,
isoleucine degradation I ,
isoleucine degradation II ,
isopenicillin N biosynthesis ,
isoprene biosynthesis II (engineered) ,
itaconate biosynthesis ,
itaconate degradation ,
laminaribiose degradation ,
lanosterol biosynthesis ,
L-arabinan degradation ,
L-arabinose degradation II ,
L-carnitine biosynthesis ,
L-cysteine degradation II ,
L-dopachrome biosynthesis ,
leucine biosynthesis ,
leucine degradation I ,
leucine degradation III ,
L-glutamine biosynthesis II (tRNA-dependent) ,
linalool biosynthesis I ,
linalool biosynthesis II ,
linuron degradation ,
lipoate biosynthesis and incorporation (glycine cleavage system, yeast) ,
lipoate biosynthesis and incorporation I ,
lipoate biosynthesis and incorporation II ,
lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) ,
lipoate salvage I ,
L-Nδ-acetylornithine biosynthesis ,
lovastatin biosynthesis ,
L-rhamnose degradation II ,
L-serine degradation ,
lutein biosynthesis ,
lysine biosynthesis IV ,
lysine degradation III ,
lysine degradation II (mammalian) ,
lysine degradation IX ,
lysine degradation VII ,
manganese oxidation I ,
mannitol degradation I ,
mannosyl-glycoprotein N-acetylglucosaminyltransferases ,
melibiose degradation ,
meso-butanediol biosynthesis II ,
methanol oxidation to formaldehyde IV ,
methionine biosynthesis III ,
methionine degradation II ,
methionine degradation III ,
methionine degradation I (to homocysteine) ,
methylglyoxal degradation I ,
methylglyoxal degradation II ,
methylglyoxal degradation III ,
methylglyoxal degradation V ,
methylglyoxal degradation VII ,
methylhalides biosynthesis (plants) ,
methyl ketone biosynthesis ,
mevalonate pathway I ,
(-)-microperfuranone biosynthesis ,
mitochondrial L-carnitine shuttle ,
mixed acid fermentation ,
molybdenum cofactor biosynthesis ,
monoacylglycerol metabolism (yeast) ,
mRNA capping I ,
myo-inositol biosynthesis ,
myo-inositol degradation I ,
N10-formyl-tetrahydrofolate biosynthesis ,
N-acetylglucosamine degradation I ,
N-acetylglucosamine degradation II ,
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde ,
NAD biosynthesis I (from aspartate) ,
NAD biosynthesis II (from tryptophan) ,
NADH repair ,
NAD/NADH phosphorylation and dephosphorylation ,
NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) ,
NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) ,
NAD salvage pathway I ,
NAD salvage pathway III ,
naringenin biosynthesis (engineered) ,
neurosporaxanthin biosynthesis ,
nitrate reduction I (denitrification) ,
nitrate reduction V (assimilatory) ,
nitrilotriacetate degradation ,
nitroethane degradation ,
nonaprenyl diphosphate biosynthesis I ,
octane oxidation ,
octanoyl-ACP biosynthesis (mitochondria, yeast) ,
octaprenyl diphosphate biosynthesis ,
oleate β-oxidation (isomerase-dependent, yeast) ,
oleate β-oxidation (reductase-dependent, yeast) ,
oleate β-oxidation (thioesterase-dependent, yeast) ,
oleate biosynthesis II (animals and fungi) ,
oligomeric urushiol biosynthesis ,
orcinol degradation ,
oxalate biosynthesis ,
oxalate degradation IV ,
oxalate degradation V ,
oxidized GTP and dGTP detoxification ,
palmitate biosynthesis I (animals and fungi) ,
palmitoleate biosynthesis II ,
paspaline biosynthesis ,
patulin biosynthesis ,
paxilline and diprenylpaxilline biosynthesis ,
pectin degradation I ,
pectin degradation II ,
penicillin K biosynthesis ,
pentose phosphate pathway ,
pentose phosphate pathway (non-oxidative branch) ,
pentose phosphate pathway (oxidative branch) I ,
phenol degradation I (aerobic) ,
phenylacetate degradation I (aerobic) ,
phenylalanine biosynthesis I ,
phenylalanine biosynthesis II ,
phenylalanine degradation I (aerobic) ,
phenylalanine degradation II (anaerobic) ,
phenylalanine degradation III ,
phenylethanol biosynthesis ,
phosphate acquisition ,
phosphatidylcholine biosynthesis I ,
phosphatidylcholine biosynthesis V ,
phosphatidylcholine resynthesis via glycerophosphocholine ,
phosphatidylethanolamine biosynthesis I ,
phosphatidylethanolamine biosynthesis III ,
phosphatidylglycerol biosynthesis II (non-plastidic) ,
phosphatidylglycerol biosynthesis I (plastidic) ,
phosphatidylglycerol degradation ,
phospholipases ,
phospholipid remodeling (phosphatidate, yeast) ,
phospholipid remodeling (phosphatidylcholine, yeast) ,
phospholipid remodeling (phosphatidylethanolamine, yeast) ,
phosphopantothenate biosynthesis I ,
plumbagin biosynthesis ,
polyisoprenoid biosynthesis (E. coli) ,
polyvinyl alcohol degradation ,
proline biosynthesis I ,
proline biosynthesis II (from arginine) ,
proline degradation ,
propionyl CoA degradation ,
protein O-[N-acetyl]-glucosylation ,
protein ubiquitination ,
pseudouridine degradation ,
pulcherrimin biosynthesis ,
purine nucleotides degradation II (aerobic) ,
purine ribonucleosides degradation ,
putrescine biosynthesis III ,
pyridoxal 5'-phosphate biosynthesis II ,
pyridoxal 5'-phosphate salvage I ,
pyrimidine deoxyribonucleotide phosphorylation ,
pyrimidine deoxyribonucleotides biosynthesis from CTP ,
pyrimidine deoxyribonucleotides de novo biosynthesis I ,
pyrimidine nucleobases salvage I ,
pyrimidine nucleobases salvage II ,
pyrimidine ribonucleosides salvage I ,
pyrimidine ribonucleosides salvage II ,
pyrimidine ribonucleosides salvage III ,
pyruvate decarboxylation to acetyl CoA ,
pyruvate fermentation to acetate V ,
pyruvate fermentation to acetate VI ,
pyruvate fermentation to acetate VII ,
pyruvate fermentation to acetate VIII ,
pyruvate fermentation to butanol II ,
pyruvate fermentation to ethanol I ,
pyruvate fermentation to ethanol II ,
pyruvate fermentation to hexanol ,
pyruvate fermentation to isobutanol (engineered) ,
pyruvate fermentation to lactate ,
quinate degradation II ,
(R)-acetoin biosynthesis I ,
raspberry ketone biosynthesis ,
resveratrol degradation ,
rhamnogalacturonan type I degradation I (fungi) ,
rhamnogalacturonan type I degradation II (bacteria) ,
ricinine degradation ,
(R,R)-butanediol biosynthesis ,
(R,R)-butanediol degradation ,
rutin degradation ,
(S)-acetoin biosynthesis ,
S-adenosyl-L-methionine biosynthesis ,
S-adenosyl-L-methionine cycle II ,
salicylate degradation I ,
salicylate degradation III ,
sciadonate biosynthesis ,
sedoheptulose bisphosphate bypass ,
selenate reduction ,
selenocysteine biosynthesis II (archaea and eukaryotes) ,
selinene biosynthesis ,
serine biosynthesis ,
serine racemization ,
siroheme biosynthesis ,
sophorolipid biosynthesis ,
sophorolipid degradation ,
spermidine biosynthesis I ,
spermine and spermidine degradation I ,
spermine biosynthesis ,
sphingolipid biosynthesis (yeast) ,
sphingolipid recycling and degradation (yeast) ,
sphingomyelin metabolism ,
sphingosine and sphingosine-1-phosphate metabolism ,
(S,S)-butanediol degradation ,
stearate biosynthesis III (fungi) ,
sterigmatocystin biosynthesis ,
sterol:steryl ester interconversion (yeast) ,
sulfate activation for sulfonation ,
sulfate reduction I (assimilatory) ,
superoxide radicals degradation ,
superpathway NAD/NADP - NADH/NADPH interconversion (yeast) ,
superpathway of 2,3-butanediol biosynthesis ,
superpathway of 4-aminobutyrate degradation ,
superpathway of 4-hydroxybenzoate biosynthesis (yeast) ,
superpathway of adenosine nucleotides de novo biosynthesis I ,
superpathway of adenosine nucleotides de novo biosynthesis II ,
superpathway of aflatoxin biosynthesis ,
superpathway of allantoin degradation in yeast ,
superpathway of alliin degradation ,
superpathway of asparagine biosynthesis ,
superpathway of betalain biosynthesis ,
superpathway of carotenoid biosynthesis ,
superpathway of dimethylsulfoniopropionate degradation ,
superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism ,
superpathway of ergosterol biosynthesis I ,
superpathway of fatty acid biosynthesis initiation (E. coli) ,
superpathway of fumitremorgin biosynthesis ,
superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) ,
superpathway of glycolysis and Entner-Doudoroff ,
superpathway of guanosine nucleotides de novo biosynthesis I ,
superpathway of heme biosynthesis from glycine ,
superpathway of inositol phosphate compounds ,
superpathway of leucine, valine, and isoleucine biosynthesis ,
superpathway of linalool biosynthesis ,
superpathway of lipoate biosynthesis and incorporation (PDH, KGDH, GCV, yeast) ,
superpathway of lysine degradation ,
superpathway of methionine biosynthesis (by sulfhydrylation) ,
superpathway of microbial D-galacturonate and D-glucuronate degradation ,
superpathway of NAD biosynthesis in eukaryotes ,
superpathway of penicillin, cephalosporin and cephamycin biosynthesis ,
superpathway of pentose and pentitol degradation ,
superpathway of polyamine biosynthesis II ,
superpathway of purine nucleotide salvage ,
superpathway of purine nucleotides de novo biosynthesis I ,
superpathway of pyrimidine deoxyribonucleoside salvage ,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis ,
superpathway of pyrimidine nucleobases salvage ,
superpathway of pyrimidine ribonucleosides salvage ,
superpathway of pyrimidine ribonucleotides de novo biosynthesis ,
superpathway of seleno-compound metabolism ,
superpathway of serine and glycine biosynthesis I ,
superpathway of sialic acids and CMP-sialic acids biosynthesis ,
superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) ,
superpathway of tetrahydrofolate biosynthesis ,
superpathway of tetrahydrofolate biosynthesis and salvage ,
superpathway of thiamin diphosphate biosynthesis III (eukaryotes) ,
superpathway of ubiquinol-6 biosynthesis (eukaryotic) ,
superpathway phosphatidate biosynthesis (yeast) ,
taxadiene biosynthesis (engineered) ,
taxol biosynthesis ,
TCA cycle II (plants and fungi) ,
terminal O-glycans residues modification ,
terminal olefins biosynthesis I ,
terminal olefins biosynthesis II ,
terrequinone A biosynthesis ,
tetrahydrobiopterin biosynthesis I ,
tetrahydrofolate biosynthesis ,
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate ,
tetrapyrrole biosynthesis II (from glycine) ,
thiamin diphosphate biosynthesis IV (eukaryotes) ,
thiamin formation from pyrithiamine and oxythiamine (yeast) ,
thiamin salvage IV (yeast) ,
thiamin triphosphate metabolism ,
thiazole biosynthesis III (eukaryotes) ,
thio-molybdenum cofactor biosynthesis ,
thioredoxin pathway ,
thiosulfate disproportionation III (rhodanese) ,
thiosulfate disproportionation I (thiol-dependent) ,
threonine biosynthesis ,
threonine biosynthesis from homoserine ,
threonine degradation II ,
threonine degradation IV ,
trans-lycopene biosynthesis I (bacteria) ,
trans, trans-farnesyl diphosphate biosynthesis ,
trehalose biosynthesis I ,
trehalose biosynthesis II ,
trehalose degradation II (trehalase) ,
trehalose degradation IV ,
trehalose degradation V ,
trehalose degradation VI (periplasmic) ,
triacylglycerol biosynthesis ,
triacylglycerol degradation ,
tRNA charging ,
tRNA methylation (yeast) ,
tRNA splicing ,
tryptophan biosynthesis ,
tryptophan degradation III (eukaryotic) ,
tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde ,
tryptophan degradation VIII (to tryptophol) ,
tyrosine biosynthesis I ,
tyrosine biosynthesis II ,
tyrosine biosynthesis III ,
tyrosine degradation I ,
tyrosine degradation III ,
ubiquinol-10 biosynthesis (eukaryotic) ,
ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) ,
ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic) ,
ubiquinol-6 bypass biosynthesis (eukaryotic) ,
ubiquinol-7 biosynthesis (eukaryotic) ,
ubiquinol-8 biosynthesis (eukaryotic) ,
ubiquinol-9 biosynthesis (eukaryotic) ,
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) ,
UDP-D-galactose biosynthesis ,
UDP-D-xylose biosynthesis ,
UDP-glucose biosynthesis ,
UDP-L-rhamnose biosynthesis ,
UDP-N-acetyl-D-galactosamine biosynthesis I ,
UDP-N-acetyl-D-glucosamine biosynthesis I ,
UDP-N-acetyl-D-glucosamine biosynthesis II ,
UMP biosynthesis ,
urate degradation to allantoin I ,
urea cycle ,
urea degradation I ,
urea degradation II ,
UTP and CTP de novo biosynthesis ,
UTP and CTP dephosphorylation I ,
UTP and CTP dephosphorylation II ,
valencene and 7-epi-α-selinene biosynthesis ,
valine biosynthesis ,
valine degradation I ,
valine degradation II ,
versicolorin B biosynthesis ,
very long chain fatty acid biosynthesis I ,
very long chain fatty acid biosynthesis II ,
wax esters biosynthesis II ,
wybutosine biosynthesis ,
xanthine and xanthosine salvage ,
xylitol degradation ,
xyloglucan degradation I (endoglucanase) ,
xyloglucan degradation II (exoglucanase) ,
xyloglucan degradation III (cellobiohydrolase) ,
xylose degradation I ,
xylose degradation II ,
zeaxanthin, antheraxanthin and violaxanthin interconversion ,
zeaxanthin biosynthesis ,
zymosterol biosynthesis


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Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Sat Dec 20, 2014, biocyc14.