Pathway Tools
Intro Tutorial
discounted registration ends Sept 5, 2015
Pathway Tools
Intro Tutorial
discounted registration ends Sept 5, 2015
Pathway Tools
Intro Tutorial
discounted registration ends Sept 5, 2015
Pathway Tools
Intro Tutorial
discounted registration ends Sept 5, 2015
Pathway Tools
Intro Tutorial
discounted registration ends Sept 5, 2015
twitter

MetaCyc Organism: Entamoeba histolytica

Rank: species

Taxonomic lineage: cellular organisms , Eukaryota , Amoebozoa , Archamoebae , Entamoebidae , Entamoeba

Direct sub-taxa of Entamoeba histolytica: Entamoeba histolytica 2759071, Entamoeba histolytica DS4-868, Entamoeba histolytica HM-1:IMSS, Entamoeba histolytica HM-3:IMSS, Entamoeba histolytica KU27, Entamoeba histolytica KU48, Entamoeba histolytica KU50, Entamoeba histolytica MS96-3382

Unification Links: NCBI-Taxonomy:5759


Pathways present in Entamoeba histolytica or one of its sub-taxa (5).
These pathways were observed experimentally in this taxon or one of its sub-taxa:
acetate formation from acetyl-CoA II ,
acetate formation from acetyl-CoA III (succinate) ,
L-methionine degradation II ,
pyruvate fermentation to acetate and alanine ,
pyruvate fermentation to acetate III

Additional pathways which may be present in Entamoeba histolytica and all its sub-taxa (263)
These pathways were inferred using their expected taxonomic range:
(1,4)-β-xylan degradation ,
[2Fe-2S] iron-sulfur cluster biosynthesis ,
2-oxobutanoate degradation I ,
2-oxoglutarate decarboxylation to succinyl-CoA ,
2-oxoisovalerate decarboxylation to isobutanoyl-CoA ,
3-phosphoinositide biosynthesis ,
3-phosphoinositide degradation ,
4-hydroxybenzoate biosynthesis I (eukaryotes) ,
4-hydroxyphenylpyruvate biosynthesis ,
5-aminoimidazole ribonucleotide biosynthesis I ,
acyl-ACP thioesterase pathway ,
acyl carrier protein metabolism II (mammalian) ,
acyl-CoA hydrolysis ,
adenine and adenosine salvage II ,
adenine and adenosine salvage III ,
adenine and adenosine salvage VI ,
adenosine 5'-phosphoramidate biosynthesis ,
adenosine deoxyribonucleotides de novo biosynthesis ,
adenosine nucleotides degradation II ,
adenosine ribonucleotides de novo biosynthesis ,
aerobic respiration I (cytochrome c) ,
allantoin degradation to ureidoglycolate II (ammonia producing) ,
allantoin degradation to ureidoglycolate I (urea producing) ,
all-trans-decaprenyl diphosphate biosynthesis ,
all-trans-farnesol biosynthesis ,
all trans undecaprenyl diphosphate biosynthesis ,
anthranilate degradation IV (aerobic) ,
arachidonate biosynthesis IV (8-detaturase) ,
beta-carboline biosynthesis ,
bisabolene biosynthesis ,
cardiolipin biosynthesis II ,
CDP-diacylglycerol biosynthesis I ,
cellulose biosynthesis ,
ceramide de novo biosynthesis ,
chitin biosynthesis ,
chlorogenic acid degradation ,
chrysophanol biosynthesis ,
cis-calamenene related sesquiterpenoids biosynthesis ,
CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis ,
CMP-N-acetylneuraminate biosynthesis I (eukaryotes) ,
CMP-N-glycoloylneuraminate biosynthesis ,
coenzyme A biosynthesis I ,
costunolide biosynthesis ,
dammara-20,24-diene biosynthesis ,
diacylglycerol and triacylglycerol biosynthesis ,
diacylglyceryl-N,N,N-trimethylhomoserine biosynthesis ,
dimethylsulfoniopropanoate degradation I (cleavage) ,
dimethyl sulfoxide degradation ,
diphthamide biosynthesis (eukaryotes) ,
D-mannose degradation ,
D-myo-inositol (1,3,4)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis ,
D-myo-inositol (1,4,5)-trisphosphate degradation ,
D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis ,
D-myo-inositol-5-phosphate metabolism ,
docosahexaenoate biosynthesis III (mammals) ,
docosahexaenoate biosynthesis I (lower eukaryotes) ,
D-serine degradation ,
D-serine metabolism ,
Entner-Doudoroff pathway I ,
epoxysqualene biosynthesis ,
ethanol degradation II ,
eumelanin biosynthesis ,
fatty acid β-oxidation I ,
fatty acid β-oxidation III (unsaturated, odd number) ,
fatty acid biosynthesis initiation I ,
fatty acid biosynthesis initiation II ,
folate polyglutamylation ,
folate transformations I ,
formaldehyde oxidation II (glutathione-dependent) ,
GDP-glucose biosynthesis ,
GDP-L-fucose biosynthesis I (from GDP-D-mannose) ,
GDP-L-fucose biosynthesis II (from L-fucose) ,
GDP-mannose biosynthesis ,
geodin biosynthesis ,
geranyl diphosphate biosynthesis ,
geranylgeranyl diphosphate biosynthesis ,
glucose and glucose-1-phosphate degradation ,
glutamate removal from folates ,
glutaminyl-tRNAgln biosynthesis via transamidation ,
glutathione biosynthesis ,
glutathione redox reactions I ,
glutathione redox reactions II ,
glutathionylspermidine biosynthesis ,
glycerol-3-phosphate shuttle ,
glycerol degradation V ,
glycine betaine degradation I ,
glycine biosynthesis I ,
glycine biosynthesis III ,
glycine cleavage ,
glycogen degradation I (bacterial) ,
glycolysis I (from glucose 6-phosphate) ,
glycolysis II (from fructose 6-phosphate) ,
glyoxylate cycle ,
guanine and guanosine salvage II ,
guanosine deoxyribonucleotides de novo biosynthesis I ,
heme biosynthesis I (aerobic) ,
heme degradation ,
heptaprenyl diphosphate biosynthesis ,
hexaprenyl diphosphate biosynthesis ,
homolactic fermentation ,
homospermidine biosynthesis ,
hypusine biosynthesis ,
icosapentaenoate biosynthesis V (Δ8 desaturase) ,
inosine-5'-phosphate biosynthesis II ,
inositol pyrophosphates biosynthesis ,
juniperonate biosynthesis ,
L-alanine biosynthesis II ,
L-alanine biosynthesis III ,
L-alanine degradation III ,
laminaribiose degradation ,
L-arginine degradation V (arginine deiminase pathway) ,
L-arginine degradation X (arginine monooxygenase pathway) ,
L-asparagine biosynthesis I ,
L-asparagine biosynthesis II ,
L-aspartate biosynthesis ,
L-aspartate degradation I ,
L-carnitine biosynthesis ,
L-citrulline degradation ,
L-cysteine degradation II ,
L-dopachrome biosynthesis ,
L-glutamate and L-glutamine biosynthesis ,
L-glutamate degradation I ,
L-glutamine biosynthesis I ,
L-glutamine degradation I ,
linalool biosynthesis I ,
linalool biosynthesis II ,
lipoate biosynthesis and incorporation I ,
L-isoleucine biosynthesis I (from threonine) ,
L-isoleucine degradation I ,
L-leucine degradation I ,
L-lysine degradation XI (mammalian) ,
L-methionine degradation I (to L-homocysteine) ,
long-chain fatty acid activation ,
L-proline biosynthesis II (from arginine) ,
L-proline degradation ,
L-selenocysteine biosynthesis II (archaea and eukaryotes) ,
L-serine biosynthesis ,
L-valine biosynthesis ,
L-valine degradation I ,
mannosyl-glycoprotein N-acetylglucosaminyltransferases ,
melibiose degradation ,
methylglyoxal degradation II ,
methylglyoxal degradation III ,
methylglyoxal degradation VII ,
methylhalides biosynthesis (plants) ,
methyl ketone biosynthesis ,
mitochondrial L-carnitine shuttle ,
molybdenum cofactor biosynthesis ,
monoacylglycerol metabolism (yeast) ,
myo-inositol biosynthesis ,
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde ,
NAD biosynthesis I (from aspartate) ,
NAD biosynthesis II (from tryptophan) ,
NADH repair ,
nonaprenyl diphosphate biosynthesis I ,
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) ,
octaprenyl diphosphate biosynthesis ,
palmitoleate biosynthesis II (plants and bacteria) ,
pentose phosphate pathway ,
pentose phosphate pathway (non-oxidative branch) ,
pentose phosphate pathway (oxidative branch) ,
phenylethanol biosynthesis ,
phosphate acquisition ,
phosphatidylcholine biosynthesis I ,
phosphatidylcholine resynthesis via glycerophosphocholine ,
phosphatidylethanolamine biosynthesis II ,
phosphatidylethanolamine biosynthesis III ,
phosphatidylglycerol biosynthesis II (non-plastidic) ,
phosphatidylglycerol biosynthesis I (plastidic) ,
phosphatidylinositol biosynthesis II (eukaryotes) ,
phospholipases ,
phospholipid remodeling (phosphatidate, yeast) ,
phospholipid remodeling (phosphatidylcholine, yeast) ,
phospholipid remodeling (phosphatidylethanolamine, yeast) ,
plumbagin biosynthesis ,
polyisoprenoid biosynthesis (E. coli) ,
polyvinyl alcohol degradation ,
propanoyl CoA degradation I ,
protein N-glycosylation (eukaryotic, high mannose) ,
protein O-[N-acetyl]-glucosylation ,
protein ubiquitylation ,
pseudouridine degradation ,
putrescine biosynthesis III ,
pyrimidine deoxyribonucleosides salvage ,
pyrimidine deoxyribonucleotide phosphorylation ,
pyrimidine deoxyribonucleotides de novo biosynthesis I ,
pyrimidine ribonucleosides salvage I ,
pyruvate decarboxylation to acetyl CoA ,
pyruvate fermentation to acetate VII ,
pyruvate fermentation to butanol II ,
pyruvate fermentation to hexanol ,
pyruvate fermentation to isobutanol (engineered) ,
pyruvate fermentation to lactate ,
raspberry ketone biosynthesis ,
reactive oxygen species degradation ,
ricinine degradation ,
S-adenosyl-L-methionine cycle II ,
sciadonate biosynthesis ,
sedoheptulose bisphosphate bypass ,
selinene biosynthesis ,
spermidine biosynthesis I ,
spermine biosynthesis ,
sphingomyelin metabolism ,
sterol:steryl ester interconversion (yeast) ,
sulfate activation for sulfonation ,
superoxide radicals degradation ,
superpathway of adenosine nucleotides de novo biosynthesis I ,
superpathway of adenosine nucleotides de novo biosynthesis II ,
superpathway of Allium flavor precursors ,
superpathway of branched amino acid biosynthesis ,
superpathway of dimethylsulfoniopropanoate degradation ,
superpathway of D-myo-inositol (1,4,5)-trisphosphate metabolism ,
superpathway of fatty acid biosynthesis initiation (E. coli) ,
superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) ,
superpathway of glycolysis and Entner-Doudoroff ,
superpathway of guanosine nucleotides de novo biosynthesis I ,
superpathway of inositol phosphate compounds ,
superpathway of L-asparagine biosynthesis ,
superpathway of L-lysine degradation ,
superpathway of L-serine and glycine biosynthesis I ,
superpathway of NAD biosynthesis in eukaryotes ,
superpathway of phosphatidate biosynthesis (yeast) ,
superpathway of polyamine biosynthesis II ,
superpathway of purine nucleotide salvage ,
superpathway of purine nucleotides de novo biosynthesis I ,
superpathway of pyrimidine deoxyribonucleoside salvage ,
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis ,
superpathway of pyrimidine ribonucleotides de novo biosynthesis ,
superpathway of sialic acids and CMP-sialic acids biosynthesis ,
taxadiene biosynthesis (engineered) ,
terminal O-glycans residues modification ,
terminal olefins biosynthesis I ,
terminal olefins biosynthesis II ,
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate ,
thiamin triphosphate metabolism ,
thio-molybdenum cofactor biosynthesis ,
thioredoxin pathway ,
thiosulfate disproportionation III (rhodanese) ,
trans, trans-farnesyl diphosphate biosynthesis ,
triacylglycerol degradation ,
tRNA charging ,
tRNA methylation (yeast) ,
tRNA splicing ,
ubiquinol-10 biosynthesis (eukaryotic) ,
ubiquinol-9 biosynthesis (eukaryotic) ,
UDP-α-D-glucuronate biosynthesis (from UDP-glucose) ,
UDP-D-galactose biosynthesis ,
UDP-D-xylose biosynthesis ,
UDP-glucose biosynthesis ,
UDP-N-acetyl-D-glucosamine biosynthesis II ,
UMP biosynthesis ,
urate degradation to allantoin I ,
urea cycle ,
UTP and CTP de novo biosynthesis ,
UTP and CTP dephosphorylation I ,
UTP and CTP dephosphorylation II ,
valencene and 7-epi-α-selinene biosynthesis ,
very long chain fatty acid biosynthesis I ,
very long chain fatty acid biosynthesis II ,
wybutosine biosynthesis ,
xanthine and xanthosine salvage


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 19.0 on Tue Sep 1, 2015, biocyc14.