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Metabolic Modeling Tutorial
early discounted registration
ends Feb 21th, 2015
Metabolic Modeling Tutorial
early discounted registration
ends Feb 21th, 2015
Metabolic Modeling Tutorial
early discounted registration
ends Feb 21th, 2015

MetaCyc Curator: Alida Pellegrini-Toole

Affiliations: Marine Biological Laboratory

Note: Listed below are contributions the curator has made to MetaCyc. They are sorted, with the most recent at the top.

precorrin-6B (C5,15) methyltransferase subunit on 28-Jun-2007 ,
precorrin-3B (C17)-methyltransferase on 27-Jun-2007 ,
farnesyl diphosphate synthase on 16-Aug-2001 ,
IPP isomerase on 16-Aug-2001 ,
mevalonate pathway I on 13-Aug-2001 ,
glyoxalase II (cytoplasmic) on 09-Aug-2001 ,
glyoxalase I on 09-Aug-2001 ,
methylglyoxal degradation II on 09-Aug-2001 ,
trehalose biosynthesis II on 21-Jun-2001 ,
superpathway of purine nucleotides de novo biosynthesis I on 07-Jun-2001 ,
cystathionine β-lyase on 22-May-2001 ,
cystathionine γ-synthase on 22-May-2001 ,
cystathionine γ-lyase on 22-May-2001 ,
cystathionine β-synthase on 22-May-2001 ,
homocysteine and cysteine interconversion on 22-May-2001 ,
rhizobactin 1021 biosynthesis on 15-May-2001 ,
nicotinate degradation I on 03-May-2001 ,
methionine degradation II on 02-May-2001 ,
dibenzo-p-dioxin degradation on 25-Apr-2001 ,
phenylmercury acetate degradation on 23-Apr-2001 ,
nylon-6 oligomer degradation on 19-Apr-2001 ,
(+)-camphor degradation on 12-Apr-2001 ,
thiocyanate degradation I on 10-Apr-2001 ,
myo-inositol degradation I on 04-Apr-2001 ,
stachydrine degradation on 04-Apr-2001 ,
choline-O-sulfate degradation on 29-Mar-2001 ,
glycine betaine biosynthesis IV (from glycine) on 29-Mar-2001 ,
phosphonoacetate degradation on 21-Mar-2001 ,
arsonoacetate degradation on 21-Mar-2001 ,
adamantanone degradation on 21-Mar-2001 ,
hexitol fermentation to lactate, formate, ethanol and acetate on 08-Mar-2001 ,
superpathway of N-acetylneuraminate degradation on 08-Mar-2001 ,
4-nitrotoluene degradation I on 20-Feb-2001 ,
adenosyl-cobalamin (5'-phosphate) synthase on 23-Jan-2001 ,
CobP on 23-Jan-2001 ,
adenosyl-cobyric acid synthase on 22-Jan-2001 ,
CobO on 22-Jan-2001 ,
cob(II)yrinate a,c-diamide reductase on 22-Jan-2001 ,
cobaltochelatase on 22-Jan-2001 ,
cobyrinate a,c-diamide synthase on 22-Jan-2001 ,
precorrin-6A reductase on 22-Jan-2001 ,
precorrin-5 (C1)-methyltransferase on 18-Jan-2001 ,
precorrin-4 (C11)-methyltransferase on 18-Jan-2001 ,
precorrin-3B synthase on 18-Jan-2001 ,
precorrin-2 (C20)-methyltransferase on 18-Jan-2001 ,
uroporphyrin-III methyltransferase on 18-Jan-2001 ,
adenosylcobalamin biosynthesis II (late cobalt incorporation) on 18-Jan-2001 ,
aconitate hydratase 1 on 16-Jan-2001 ,
2-methylcitrate dehydratase on 16-Jan-2001 ,
2-methylcitrate synthase on 16-Jan-2001 ,
propionate-CoA ligase on 16-Jan-2001 ,
aldoxime degradation on 11-Jan-2001 ,
superpathway of acrylonitrile degradation on 11-Jan-2001 ,
resorcinol degradation on 11-Jan-2001 ,
orcinol degradation on 10-Jan-2001 ,
glycolysis V (Pyrococcus) on 10-Jan-2001 ,
benzoyl-CoA degradation III (anaerobic) on 21-Dec-2000 ,
ammonia oxidation II (anaerobic) on 20-Dec-2000 ,
galena oxidation on 19-Dec-2000 ,
hydrogen oxidation I (aerobic) on 18-Dec-2000 ,
nitrite oxidation on 18-Dec-2000 ,
coenzyme M biosynthesis I on 12-Dec-2000 ,
coenzyme B biosynthesis on 11-Dec-2000 ,
sulfate reduction V (dissimilatory) on 05-Dec-2000 ,
sulfide oxidation I (sulfide-quinone reductase) on 05-Dec-2000 ,
sulfur disproportionation I (anaerobic) on 04-Dec-2000 ,
formaldehyde assimilation III (dihydroxyacetone cycle) on 30-Nov-2000 ,
protocatechuate degradation I (meta-cleavage pathway) on 30-Nov-2000 ,
catechol degradation to 2-oxopent-4-enoate I on 30-Nov-2000 ,
superpathway of purines degradation in plants on 27-Nov-2000 ,
purine nucleobases degradation I (anaerobic) on 27-Nov-2000 ,
lysine fermentation to acetate and butyrate on 27-Nov-2000 ,
glutamate degradation V (via hydroxyglutarate) on 27-Nov-2000 ,
pyruvate fermentation to acetate I on 20-Nov-2000 ,
acetyl-CoA fermentation to butyrate II on 16-Nov-2000 ,
Bifidobacterium shunt on 14-Nov-2000 ,
heterolactic fermentation on 14-Nov-2000 ,
superpathway of (R,R)-butanediol biosynthesis on 14-Nov-2000 ,
pyruvate fermentation to propionate I on 09-Nov-2000 ,
formaldehyde oxidation I on 09-Nov-2000 ,
citrate lyase activation on 08-Nov-2000 ,
TCA cycle IV (2-oxoglutarate decarboxylase) on 08-Nov-2000 ,
incomplete reductive TCA cycle on 19-Oct-2000 ,
reductive TCA cycle I on 17-Oct-2000 ,
gallate degradation III (anaerobic) on 10-Oct-2000 ,
acyl-CoA synthetase on 17-Aug-2000 ,
aldehyde dehydrogenase on 17-Aug-2000 ,
octanol dehydrogenase on 17-Aug-2000 ,
octane oxidation on 15-Aug-2000 ,
nitroglycerin degradation on 08-Aug-2000 ,
nicotine degradation I on 01-Aug-2000 ,
acetylene hydratase on 31-Jul-2000 ,
acetylene degradation on 31-Jul-2000 ,
atrazine degradation I (aerobic) on 27-Jul-2000 ,
adenine and adenosine salvage I on 20-Jul-2000 ,
2-methylcitrate cycle I on 20-Jun-2000 ,
conversion of succinate to propionate on 19-Jun-2000 ,
D-allose degradation on 09-May-2000 ,
pyruvate fermentation to acetate and lactate I on 05-Apr-2000 ,
pentose phosphate pathway (partial) on 28-Mar-2000 ,
allantoin degradation IV (anaerobic) on 28-Feb-2000 ,
glycolysis III (from glucose) on 17-Feb-2000 ,
nitrate reduction I (denitrification) on 13-Jan-2000 ,
nitric oxide reductase on 13-Jan-2000 ,
nitrite reductase on 11-Jan-2000 ,
two-component alkanesulfonate monooxygenase on 06-Jan-2000 ,
1,4-dichlorobenzene degradation on 07-Dec-1999 ,
γ-hexachlorocyclohexane degradation on 30-Nov-1999 ,
tetrachloroethene degradation on 23-Nov-1999 ,
benzenesulfonate degradation on 17-Nov-1999 ,
catechol 2,3-dioxygenase on 17-Nov-1999 ,
orthanilate degradation on 16-Nov-1999 ,
4-toluenecarboxylate degradation on 09-Nov-1999 ,
DCD dehydrogenase on 09-Nov-1999 ,
4-toluenesulfonate degradation I on 08-Nov-1999 ,
anaerobic aromatic compound degradation (Thauera aromatica) on 08-Nov-1999 ,
4-carboxybenzaldehyde dehydrogenase / 4-sulfobenzaldehyde dehydrogenase on 08-Nov-1999 ,
4-carboxybenzyl alcohol dehydrogenase / 4-sulfobenzyl alcohol dehydrogenase on 08-Nov-1999 ,
anthranilate degradation III (anaerobic) on 27-Oct-1999 ,
phenol degradation II (anaerobic) on 27-Oct-1999 ,
phenylalanine degradation II (anaerobic) on 26-Oct-1999 ,
benzoyl-CoA degradation II (anaerobic) on 26-Oct-1999 ,
reductive acetyl coenzyme A pathway on 21-Oct-1999 ,
ammonia oxidation I (aerobic) on 21-Oct-1999 ,
formyltetrahydrofolate synthetase on 19-Oct-1999 ,
trypanothione biosynthesis on 14-Oct-1999 ,
2-aminoethylphosphonate degradation I on 20-Sep-1999 ,
spermidine biosynthesis I on 14-Sep-1999 ,
arginine biosynthesis II (acetyl cycle) on 26-Aug-1999 ,
sulfur oxidation II (Fe+3-dependent) on 12-Aug-1999 ,
sulfur oxidation I (aerobic) on 12-Aug-1999 ,
sulfite:ferric ion oxidoreductase on 11-Aug-1999 ,
sulfur:ferric ion oxidoreductase on 11-Aug-1999 ,
thiosulfate oxidation I (to tetrathionate) on 11-Aug-1999 ,
SoxZ on 11-Aug-1999 ,
SoxY on 11-Aug-1999 ,
SoxA on 11-Aug-1999 ,
SoxB on 11-Aug-1999 ,
SoxC on 11-Aug-1999 ,
SoxD on 11-Aug-1999 ,
SoxE on 11-Aug-1999 ,
SoxF on 11-Aug-1999 ,
Sox enzyme system on 10-Aug-1999 ,
[NiFe]-hydrogenase (soluble) on 10-Aug-1999 ,
[NiFe]-hydrogenase (membrane bound) on 09-Aug-1999 ,
formylmethanofuran dehydrogenase, molybdenum enzyme on 23-Jun-1999 ,
methanogenesis from acetate on 08-Jun-1999 ,
methyl-coenzyme M reduction to methane on 07-Jun-1999 ,
sulfate reduction IV (dissimilatory) on 27-May-1999 ,
superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation on 11-Mar-1999 ,
nitrogen fixation on 14-Jan-1999 ,
oxygenic photosynthesis on 13-Jan-1999 ,
Calvin-Benson-Bassham cycle on 12-Jan-1999 ,
methylerythritol phosphate pathway I on 21-Dec-1998 ,
superpathway of acetate utilization and formation on 14-Dec-1998 ,
ammonia assimilation cycle III on 02-Dec-1998 ,
L-idonate degradation on 20-Oct-1998 ,
L-lyxose degradation on 07-May-1998 ,
colanic acid building blocks biosynthesis on 02-Dec-1997 ,
enterobactin biosynthesis on 17-Jul-1997 ,
phenylethylamine degradation I on 10-Jul-1997

Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Fri Feb 27, 2015, BIOCYC13A.