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MetaCyc Reaction: 4.1.1.39

Superclasses: Reactions Classified By Conversion TypeSimple ReactionsChemical Reactions
Reactions Classified By SubstrateSmall-Molecule Reactions

EC Number: 4.1.1.39

Enzymes and Genes:

Arabidopsis thaliana col: ribulose bisphosphate carboxylase/oxygenaseAuthor statement: RBSS-1B, RBCL
ribulose bisphosphate carboxylase/oxygenaseAuthor statement: RBCL, RBCS-1A
ribulose bisphosphate carboxylase/oxygenaseAuthor statement: RBCS-3B, RBCL
ribulose bisphosphate carboxylase/oxygenaseAuthor statement: RBCS-2B, RBCL
Rhodospirillum rubrum: ribulose bisphosphate carboxylaseInferred from experiment: cbbM
Synechocystis sp. PCC 6803: ribulose bisphosphate carboxylaseInferred from experiment: cbbS, cbbL
Thermococcus kodakarensis: ribulose bisphosphate carboxylaseInferred from experiment: rbcL

In Pathway: Rubisco shunt, adenosine nucleotides degradation IV, Calvin-Benson-Bassham cycle

The direction shown, i.e. which substrates are on the left and right sides, is in accordance with the Enzyme Commission system.

Most BioCyc compounds have been protonated to a reference pH value of 7.3. Please see the PGDB Concepts Guide for more information.

Mass balance status: Balanced.

Enzyme Commission Primary Name: ribulose-bisphosphate carboxylase

Enzyme Commission Synonyms: D-ribulose 1,5-diphosphate carboxylase, D-ribulose-1,5-bisphosphate carboxylase, RuBP carboxylase, carboxydismutase, diphosphoribulose carboxylase, ribulose 1,5-bisphosphate carboxylase, ribulose 1,5-bisphosphate carboxylase/oxygenase, ribulose 1,5-diphosphate carboxylase, ribulose 1,5-diphosphate carboxylase/oxygenase, ribulose bisphosphate carboxylase/oxygenase, ribulose diphosphate carboxylase, ribulose diphosphate carboxylase/oxygenase, rubisco, 3-phospho-D-glycerate carboxy-lyase (dimerizing)

Standard Gibbs Free Energy (ΔrG in kcal/mol): 4.1412964Inferred by computational analysis [Latendresse13]

Enzyme Commission Summary:
Will utilize O(2) instead of CO(2), forming 3-phospho-D-glycerate and 2-phosphoglycolate.

Citations: [Bowes71, Wishnick69]

Gene-Reaction Schematic

Gene-Reaction Schematic

Unification Links: KEGG:R00024, Rhea:23124

Relationship Links: BRENDA:EC:4.1.1.39, ENZYME:EC:4.1.1.39, IUBMB-ExplorEnz:EC:4.1.1.39, UniProt:RELATED-TO:O22487, UniProt:RELATED-TO:O28635, UniProt:RELATED-TO:O28685, UniProt:RELATED-TO:O31666, UniProt:RELATED-TO:O58677, UniProt:RELATED-TO:O65194, UniProt:RELATED-TO:P00865, UniProt:RELATED-TO:P00868, UniProt:RELATED-TO:P00869, UniProt:RELATED-TO:P00870, UniProt:RELATED-TO:P00872, UniProt:RELATED-TO:P00873, UniProt:RELATED-TO:P00874, UniProt:RELATED-TO:P00875, UniProt:RELATED-TO:P00876, UniProt:RELATED-TO:P00877, UniProt:RELATED-TO:P00878, UniProt:RELATED-TO:P00879, UniProt:RELATED-TO:P00880, UniProt:RELATED-TO:P04716, UniProt:RELATED-TO:P04717, UniProt:RELATED-TO:P04718, UniProt:RELATED-TO:P04991, UniProt:RELATED-TO:P04992, UniProt:RELATED-TO:P05346, UniProt:RELATED-TO:P05347, UniProt:RELATED-TO:P05348, UniProt:RELATED-TO:P05349, UniProt:RELATED-TO:P05698, UniProt:RELATED-TO:P05699, UniProt:RELATED-TO:P06292, UniProt:RELATED-TO:P07089, UniProt:RELATED-TO:P07179, UniProt:RELATED-TO:P07180, UniProt:RELATED-TO:P07398, UniProt:RELATED-TO:P07689, UniProt:RELATED-TO:P08135, UniProt:RELATED-TO:P08211, UniProt:RELATED-TO:P08474, UniProt:RELATED-TO:P08475, UniProt:RELATED-TO:P08705, UniProt:RELATED-TO:P08706, UniProt:RELATED-TO:P10053, UniProt:RELATED-TO:P10647, UniProt:RELATED-TO:P10795, UniProt:RELATED-TO:P10796, UniProt:RELATED-TO:P10797, UniProt:RELATED-TO:P10798, UniProt:RELATED-TO:P11383, UniProt:RELATED-TO:P11421, UniProt:RELATED-TO:P11422, UniProt:RELATED-TO:P12089, UniProt:RELATED-TO:P12466, UniProt:RELATED-TO:P12468, UniProt:RELATED-TO:P13951, UniProt:RELATED-TO:P14957, UniProt:RELATED-TO:P14958, UniProt:RELATED-TO:P14959, UniProt:RELATED-TO:P14961, UniProt:RELATED-TO:P16031, UniProt:RELATED-TO:P16032, UniProt:RELATED-TO:P16129, UniProt:RELATED-TO:P16130, UniProt:RELATED-TO:P16131, UniProt:RELATED-TO:P16132, UniProt:RELATED-TO:P16133, UniProt:RELATED-TO:P16134, UniProt:RELATED-TO:P16136, UniProt:RELATED-TO:P16137, UniProt:RELATED-TO:P16138, UniProt:RELATED-TO:P16306, UniProt:RELATED-TO:P16881, UniProt:RELATED-TO:P17537, UniProt:RELATED-TO:P17673, UniProt:RELATED-TO:P18062, UniProt:RELATED-TO:P18566, UniProt:RELATED-TO:P18567, UniProt:RELATED-TO:P18960, UniProt:RELATED-TO:P19160, UniProt:RELATED-TO:P19161, UniProt:RELATED-TO:P19162, UniProt:RELATED-TO:P19163, UniProt:RELATED-TO:P19164, UniProt:RELATED-TO:P19308, UniProt:RELATED-TO:P19309, UniProt:RELATED-TO:P19310, UniProt:RELATED-TO:P19311, UniProt:RELATED-TO:P19312, UniProt:RELATED-TO:P20455, UniProt:RELATED-TO:P22433, UniProt:RELATED-TO:P22849, UniProt:RELATED-TO:P22850, UniProt:RELATED-TO:P22859, UniProt:RELATED-TO:P22860, UniProt:RELATED-TO:P23011, UniProt:RELATED-TO:P23012, UniProt:RELATED-TO:P23651, UniProt:RELATED-TO:P23652, UniProt:RELATED-TO:P24312, UniProt:RELATED-TO:P24313, UniProt:RELATED-TO:P24395, UniProt:RELATED-TO:P24624, UniProt:RELATED-TO:P24671, UniProt:RELATED-TO:P24672, UniProt:RELATED-TO:P24673, UniProt:RELATED-TO:P24674, UniProt:RELATED-TO:P24675, UniProt:RELATED-TO:P24676, UniProt:RELATED-TO:P24677, UniProt:RELATED-TO:P24678, UniProt:RELATED-TO:P24679, UniProt:RELATED-TO:P24681, UniProt:RELATED-TO:P24682, UniProt:RELATED-TO:P24683, UniProt:RELATED-TO:P25413, UniProt:RELATED-TO:P25414, UniProt:RELATED-TO:P25458, UniProt:RELATED-TO:P26490, UniProt:RELATED-TO:P26573, UniProt:RELATED-TO:P26574, UniProt:RELATED-TO:P26575, UniProt:RELATED-TO:P26576, UniProt:RELATED-TO:P26577, UniProt:RELATED-TO:P26667, UniProt:RELATED-TO:P26958, UniProt:RELATED-TO:P26959, UniProt:RELATED-TO:P26960, UniProt:RELATED-TO:P26961, UniProt:RELATED-TO:P26962, UniProt:RELATED-TO:P26963, UniProt:RELATED-TO:P26964, UniProt:RELATED-TO:P26985, UniProt:RELATED-TO:P27065, UniProt:RELATED-TO:P27568, UniProt:RELATED-TO:P27569, UniProt:RELATED-TO:P27985, UniProt:RELATED-TO:P27997, UniProt:RELATED-TO:P27998, UniProt:RELATED-TO:P28258, UniProt:RELATED-TO:P28260, UniProt:RELATED-TO:P28399, UniProt:RELATED-TO:P28895, UniProt:RELATED-TO:P28896, UniProt:RELATED-TO:P29684, UniProt:RELATED-TO:P30401, UniProt:RELATED-TO:P31180, UniProt:RELATED-TO:P31181 ... [127 more not displayed]


References

Bowes71: Bowes G, Ogren WL, Hageman RH (1971). "Phosphoglycolate production catalyzed by ribulose diphosphate carboxylase." Biochem Biophys Res Commun 45(3);716-22. PMID: 4331471

Latendresse13: Latendresse M. (2013). "Computing Gibbs Free Energy of Compounds and Reactions in MetaCyc."

Wishnick69: Wishnick M, Lane MD, Scrutton MC, Mildvan AS (1969). "The presence of tightly bound copper in ribulose diphosphate carboxylase from spinach." J Biol Chem 244(20);5761-3. PMID: 4310607


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by Pathway Tools version 19.5 (software by SRI International) on Fri Feb 12, 2016, biocyc13.