Metabolic Modeling Tutorial
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Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
BioCyc websites down
12/28 - 12/31
for maintenance.
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MetaCyc Reaction: 4.2.3.57

Superclasses: Reactions Classified By Conversion Type Simple Reactions Chemical Reactions
Reactions Classified By Substrate Small-Molecule Reactions

EC Number: 4.2.3.57

Enzymes and Genes:
caryophyllene synthase Inferred from experiment : CAHS ( Solanum lycopersicum )
(E)-beta-caryophyllene synthase Inferred from experiment : tps23 ( Zea luxurians )
(E)-beta-caryophyllene synthase Inferred from experiment : tps23 ( Zea mays )
(E)-beta-caryophyllene synthase Inferred from experiment : TPS23 ( Zea mays huehuetenangensis )
(E)-beta-caryophyllene/beta-elemene synthase Inferred from experiment : OsTPS3 ( Oryza sativa )
beta-caryophyllene synthase Inferred from experiment : QHS1 ( Artemisia annua )
beta-caryophyllene synthase Inferred from experiment : bcp ( Cucumis sativus )
alpha-humulene synthase Inferred from experiment : zss1 ( Zingiber zerumbet )
δ-selinene synthase Inferred from experiment : f-δsel1 ( Abies grandis )
(-)-β-caryophyllene synthase Inferred from experiment : AT5G23960 ( Arabidopsis thaliana col )

In Pathway: oleoresin sesquiterpene volatiles biosynthesis , β-caryophyllene biosynthesis

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the Enzyme Commission system.

Mass balance status: Balanced.

Enzyme Commission Primary Name: (-)-β-caryophyllene synthase

Enzyme Commission Synonyms: β-caryophyllene synthase, (2E,6E)-farnesyl-diphosphate diphosphate-lyase (caryophyllene-forming)

Standard Gibbs Free Energy (ΔrG in kcal/mol): -27.619995 Inferred by computational analysis [Latendresse13]

Enzyme Commission Summary:
Widely distributed in higher plants, cf.EC 4.2.3.89 (+)-β-caryophyllene synthase.

Citations: [Cai02]

Gene-Reaction Schematic: ?

Unification Links: KEGG:R08541 , Rhea:28294

Relationship Links: BRENDA:EC:4.2.3.57 , ENZYME:EC:4.2.3.57 , IUBMB-ExplorEnz:EC:4.2.3.57

Credits:
Revised 21-Oct-2011 by Caspi R , SRI International


References

Cai02: Cai Y, Jia JW, Crock J, Lin ZX, Chen XY, Croteau R (2002). "A cDNA clone for beta-caryophyllene synthase from Artemisia annua." Phytochemistry 61(5);523-9. PMID: 12409018

Latendresse13: Latendresse M. (2013). "Computing Gibbs Free Energy of Compounds and Reactions in MetaCyc."


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Sat Dec 20, 2014, biocyc14.