Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
Metabolic Modeling Tutorial
discounted EARLY registration ends Dec 31, 2014
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MetaCyc Reaction: 3.6.1.63

Superclasses: Reactions Classified By Conversion Type Simple Reactions Chemical Reactions
Reactions Classified By Substrate Small-Molecule Reactions

EC Number: 3.6.1.63

Enzymes and Genes:
RPnTP hydrolase Inferred from experiment : phnM ( Escherichia coli K-12 substr. MG1655 )

In Pathway: methylphosphonate degradation I , methylphosphonate degradation II

The reaction direction shown, that is, A + B ↔ C + D versus C + D ↔ A + B, is in accordance with the Enzyme Commission system.

Most BioCyc compounds have been protonated to a reference pH value of 7.3, and some reactions have been computationally balanced for hydrogen by adding free protons. Please see the PGDB Concepts Guide for more information.

Mass balance status: Balanced.

Enzyme Commission Primary Name: α-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase

Enzyme Commission Synonyms: phnM (gene name)

Standard Gibbs Free Energy (ΔrG in kcal/mol): -112.3006 Inferred by computational analysis [Latendresse13]

Enzyme Commission Summary:
Isolated from the bacterium Escherichia coli.

Citations: [Kamat11]

Gene-Reaction Schematic: ?

Unification Links: Rhea:34683

Relationship Links: BRENDA:EC:3.6.1.63 , ENZYME:EC:3.6.1.63 , IUBMB-ExplorEnz:EC:3.6.1.63

Credits:
Created in EcoCyc 22-Nov-2011 by Keseler I , SRI International
Imported from EcoCyc 20-Dec-2011 by Keseler I , SRI International
Revised 25-Oct-2012 by Caspi R , SRI International


References

Kamat11: Kamat SS, Williams HJ, Raushel FM (2011). "Intermediates in the transformation of phosphonates to phosphate by bacteria." Nature 480(7378);570-3. PMID: 22089136

Latendresse13: Latendresse M. (2013). "Computing Gibbs Free Energy of Compounds and Reactions in MetaCyc."


Report Errors or Provide Feedback
Please cite the following article in publications resulting from the use of MetaCyc: Caspi et al, Nucleic Acids Research 42:D459-D471 2014
Page generated by SRI International Pathway Tools version 18.5 on Mon Nov 24, 2014, BIOCYC13B.