Pathway Tools BLAST Search Page

This page allows users to submit a sequence to BLAST against the complete genome of the currently selected organism. The output contains links to the BioCyc pages for any genes or proteins that produce hits.

For more information about BLAST+ and the various options available, see the BLAST+ page at NCBI.

Type of query sequence: Type of database to search against:


Enter your query sequence here in FASTA format:

Expectation Value Threshold:

Filter query sequence for low-complexity regions?

Query Genetic Codes (blastx only)

  Matrix         Gap existence cost   Per residue gap cost   Lambda ratio    

Other advanced options:     

Report Errors or Provide Feedback
Page generated by Pathway Tools version 20.0 (software by SRI International) on Fri Jul 29, 2016, BIOCYC13A.
EcoCyc version 20.0.