This page lists all of the 156 functional gene clusters (FunGCs) that have been identified in this organism.

Clicking on a gene name will navigate to the Genome-Context Analysis page for that gene. Clicking on a product name will navigate to the standard information page for that gene and gene product.

FunGC1	araA L-arabinose isomerase araB ribulokinase lacI DNA-binding transcriptional repressor LacI ulaF L-ribulose-5-phosphate 4-epimerase UlaF
FunGC2	argA N-acetylglutamate synthase argB acetylglutamate kinase argC N-acetylglutamylphosphate reductase argD N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase argG argininosuccinate synthetase argH argininosuccinate lyase argI ornithine carbamoyltransferase aroA 3-phosphoshikimate 1-carboxyvinyltransferase aroC chorismate synthase astC succinylornithine transaminase dmlA D-malate/3-isopropylmalate dehydrogenase (decarboxylating) gltB glutamate synthase subunit GltB hisA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase hisB imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase hisC histidinol-phosphate aminotransferase hisD histidinol dehydrogenase hisF imidazole glycerol phosphate synthase subunit HisF hisG ATP phosphoribosyltransferase hisH imidazole glycerol phosphate synthase subunit HisH hisI putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase ilvC ketol-acid reductoisomerase (NADP+) ilvD dihydroxy-acid dehydratase ilvE branched-chain-amino-acid aminotransferase ilvH acetolactate synthase / acetohydroxybutanoate synthase, regulatory subunit ilvI acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit leuA 2-isopropylmalate synthase leuB 3-isopropylmalate dehydrogenase leuC 3-isopropylmalate dehydratase subunit LeuC leuD 3-isopropylmalate dehydratase subunit LeuD pabA aminodeoxychorismate synthase subunit 2 pheA fused chorismate mutase/prephenate dehydratase trpA tryptophan synthase subunit α trpB tryptophan synthase, β subunit dimer trpC fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpD anthranilate synthase subunit TrpD trpE anthranilate synthase subunit TrpE
FunGC3	argT lysine/arginine/ornithine ABC transporter periplasmic binding protein hisM lysine/arginine/ornithine ABC transporter / histidine ABC transporter, membrane subunit HisM hisP lysine/arginine/ornithine ABC transporter / histidine ABC transporter, ATP binding subunit hisQ lysine/arginine/ornithine ABC transporter / histidine ABC transporter, membrane subunit HisQ
FunGC4	bioA adenosylmethionine-8-amino-7-oxononanoate aminotransferase bioB biotin synthase bioD dethiobiotin synthetase bioF 8-amino-7-oxononanoate synthase
FunGC5	bglA 6-phospho-β-glucosidase A chbA N,N'-diacetylchitobiose-specific PTS enzyme IIA component chbB N,N'-diacetylchitobiose-specific PTS enzyme IIB component chbC N,N'-diacetylchitobiose-specific PTS enzyme IIC component chbF monoacetylchitobiose-6-phosphate hydrolase
FunGC6	cysD sulfate adenylyltransferase subunit 2 cysH phosphoadenosine phosphosulfate reductase cysI sulfite reductase, hemoprotein subunit cysN sulfate adenylyltransferase subunit 1
FunGC7	cysA sulfate/thiosulfate ABC transporter ATP binding subunit cysP thiosulfate/sulfate ABC transporter periplasmic binding protein CysP cysU sulfate/thiosulfate ABC transporter inner membrane subunit CysU cysW sulfate/thiosulfate ABC transporter inner membrane subunit CysW sbp sulfate/thiosulfate ABC transporter periplasmic binding protein Sbp
FunGC8	deoA thymidine phosphorylase / uracil phosphorylase deoB phosphopentomutase deoC deoxyribose-phosphate aldolase deoD purine nucleoside phosphorylase
FunGC9	entA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase entB holo EntB entC isochorismate synthase EntC entE 2,3-dihydroxybenzoate-[aryl-carrier protein] ligase
FunGC10	entA 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase entE 2,3-dihydroxybenzoate-[aryl-carrier protein] ligase entF seryl-[EntF peptidyl-carrier protein] ybdZ enterobactin biosynthesis protein YbdZ
FunGC11	frdA fumarate reductase flavoprotein subunit frdB fumarate reductase [Fe-S] protein frdC fumarate reductase membrane protein FrdC frdD fumarate reductase membrane protein FrdD
FunGC12	hycA regulator of the transcriptional regulator FhlA hycB hydrogenase 3 [Fe-S] protein HycB hycC hydrogenase 3 membrane subunit HycC hycH formate hydrogenlyase assembly protein
FunGC13	mrdA peptidoglycan DD-transpeptidase MrdA mrdB peptidoglycan glycosyltransferase MrdB mreB dynamic cytoskeletal protein MreB mreC cell shape determining protein MreC
FunGC14	potA spermidine preferential ABC transporter ATP binding subunit potB spermidine preferential ABC transporter membrane subunit PotB potC spermidine preferential ABC transporter membrane subunit PotC potD spermidine preferential ABC transporter periplasmic binding protein
FunGC15	pspA phage shock protein A pspB phage shock protein B pspC phage shock protein C pspF DNA-binding transcriptional dual regulator PspF sapA putative periplasmic binding protein SapA sapB putrescine ABC exporter membrane subunit SapB sapC putrescine ABC exporter membrane protein SapC sapD putrescine ABC exporter ATP binding protein SapD sapF putrescine ABC exporter ATP binding protein SapF tyrR DNA-binding transcriptional dual regulator TyrR ycjF DUF697 domain-containing inner membrane protein YcjF ycjX DUF463 domain-containing protein YcjX
FunGC16	alaS alanine—tRNA ligase/DNA-binding transcriptional repressor argS arginine—tRNA ligase eno enolase ffh signal recognition particle protein component, subunit of Signal Recognition Particle ftsH ATP-dependent zinc metalloprotease FtsH glmU fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase hisS histidine—tRNA ligase ileS isoleucine—tRNA ligase infB translation initiation factor IF-2β' ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase lolB outer membrane lipoprotein LolB mazG nucleoside triphosphate pyrophosphohydrolase metG methionine—tRNA ligase mfd transcription-repair coupling factor pgk phosphoglycerate kinase pheS phenylalanine—tRNA ligase prs ribose-phosphate diphosphokinase pth peptidyl-tRNA hydrolase rplY 50S ribosomal subunit protein L25, subunit of ribosome rsmA 16S rRNA (A1518/A1519-N6-dimethyltransferase rsmI 16S rRNA 2'-O-ribose C1402 methyltransferase thrS threonine—tRNA ligase tsaD N6-L-threonylcarbamoyladenine synthase, TsaD subunit valS valine—tRNA ligase ycfH putative metal-dependent hydrolase YcfH ychF redox-responsive ATPase YchF
FunGC17	prfA peptide chain release factor RF1 prmC protein-(glutamine-N5) methyltransferase rho transcription termination factor Rho rpmE 50S ribosomal subunit protein L31, subunit of ribosome
FunGC18	dnaQ DNA polymerase III subunit ε gloB hydroxyacylglutathione hydrolase GloB rnhA ribonuclease HI yafS putative S-adenosyl-L-methionine-dependent methyltransferase
FunGC19	aspS aspartate—tRNA ligase bamA outer membrane protein assembly factor BamA cdsA CDP-diglyceride synthetase clpP ClpP serine protease clpX ClpX ATP-dependent protease specificity component and chaperone coaD pantetheine-phosphate adenylyltransferase ddlB D-alanine—D-alanine ligase B def peptide deformylase der 50S ribosomal subunit stability factor dfp fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase dnaE DNA polymerase III subunit α dnaG DNA primase dnaJ chaperone protein DnaJ dnaK chaperone protein DnaK dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase efp protein chain elongation factor EF-P, β-lysyl-Lys34 era 30S ribosomal subunit maturation GTPase Era ffh signal recognition particle protein component, subunit of Signal Recognition Particle fmt 10-formyltetrahydrofolate:L-methionyl-tRNAfMet N-formyltransferase folC bifunctional folylpolyglutamate synthetase / dihydrofolate synthetase frr ribosome-recycling factor ftsA cell division protein FtsA ftsI peptidoglycan DD-transpeptidase FtsI ftsK cell division DNA translocase FtsK ftsQ cell division protein FtsQ ftsW peptidoglycan glycosyltransferase FtsW ftsY signal recognition particle receptor ftsZ cell division protein FtsZ gltX glutamate—tRNA ligase gmk guanylate kinase gpsA glycerol-3-phosphate dehydrogenase, biosynthetic grpE nucleotide exchange factor GrpE hemW heme chaperone HemW infB translation initiation factor IF-2β' infC translation initiation factor IF-3 ispG (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) ispU ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] lepA 30S ribosomal subunit biogenesis factor LepA lepB signal peptidase I leuS leucine—tRNA ligase lon Lon protease lpxC UDP-3-O-acyl-N-acetylglucosamine deacetylase metK methionine adenosyltransferase miaA tRNA dimethylallyltransferase mraY phospho-N-acetylmuramoyl-pentapeptide-transferase mraZ DNA-binding transcriptional repressor MraZ murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase murB UDP-N-acetylenolpyruvoylglucosamine reductase murC UDP-N-acetylmuramate—L-alanine ligase murD UDP-N-acetylmuramoyl-L-alanine—D-glutamate ligase murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate—2,6-diaminopimelate ligase murF UDP-N-acetylmuramoyl-tripeptide—D-alanyl-D-alanine ligase murG N-acetylglucosaminyl transferase nadD nicotinate-nucleotide adenylyltransferase nusA transcription termination/antitermination protein NusA obgE GTPase ObgE pgsA CDP-diacylglycerol—glycerol-3-phosphate 3-phosphatidyltransferase pnp polynucleotide phosphorylase polA DNA polymerase I priA replication restart protein PriA proA glutamate-5-semialdehyde dehydrogenase proB glutamate 5-kinase pyrH UMP kinase rbfA 30S ribosome binding factor recA DNA recombination/repair protein RecA recG ATP-dependent DNA helicase RecG recN DNA repair protein RecN ribF bifunctional riboflavin kinase / FMN adenylyltransferase rimM ribosome maturation factor RimM rimP ribosome maturation factor RimP rlmN 23S rRNA m2A2503 methyltransferase/tRNA m2A37 methyltransferase rluD 23S rRNA pseudouridine1911/1915/1917 synthase rnc RNase III rnhB RNase HII rpe ribulose-phosphate 3-epimerase rplS 50S ribosomal subunit protein L19, subunit of ribosome rplT 50S ribosomal subunit protein L20, subunit of ribosome rplU 50S ribosomal subunit protein L21, subunit of ribosome rpmA 50S ribosomal subunit protein L27, subunit of ribosome rpoD RNA polymerase sigma factor RpoD rpsB 30S ribosomal subunit protein S2, subunit of ribosome rpsO 30S ribosomal subunit protein S15, subunit of ribosome rpsP 30S ribosomal subunit protein S16, subunit of ribosome rpsT 30S ribosomal subunit protein S20, subunit of ribosome rpsU 30S ribosomal subunit protein S21, subunit of ribosome rseP intramembrane zinc metalloprotease RseP rsfS ribosomal silencing factor RsfS rsgA ribosome small subunit-dependent GTPase A rsmB 16S rRNA m5C967 methyltransferase rsmD 16S rRNA m2G966 methyltransferase rsmE 16S rRNA m3U1498 methyltransferase rsmH 16S rRNA m4C1402 methyltransferase smf protein Smf tig trigger factor trmD tRNA m1G37 methyltransferase truB tRNA pseudouridine55 synthase tsf protein chain elongation factor EF-Ts valS valine—tRNA ligase ybeY endoribonuclease YbeY ybeZ PhoH-like protein yfiH purine nucleoside phosphorylase YfiH yggS PLP homeostasis protein yifB putative magnesium chelatase YifB yihA GTP-binding protein YihA yraN PF02021 family protein YraN
FunGC20	gltA citrate synthase sdhA succinate:quinone oxidoreductase, FAD binding protein sdhB succinate:quinone oxidoreductase, [Fe-S] cluster binding protein sdhC succinate:quinone oxidoreductase, membrane protein SdhC sdhD succinate:quinone oxidoreductase, membrane protein SdhD sucA 2-oxoglutarate decarboxylase, thiamine-requiring
FunGC21	gutM DNA-binding transcriptional activator GutM srlA sorbitol-specific PTS enzyme IIC2 component srlB sorbitol-specific PTS enzyme IIA component srlE sorbitol-specific PTS enzyme IIBC1 component
FunGC22	dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispG (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin) ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
FunGC23	dnaX DNA polymerase III subunit gamma recR recombination mediator protein RecR tadA tRNA adenosine34 deaminase ybaB putative nucleoid-associated protein YbaB
FunGC24	ppdA prepilin-type N-terminal cleavage/methylation domain-containing protein PpdA ppdB prepilin-type N-terminal cleavage/methylation domain-containing protein PpdB ppdC prepilin-type N-terminal cleavage/methylation domain-containing protein PpdC ygdB DUF2509 domain-containing protein YgdB
FunGC25	ribA GTP cyclohydrolase 2 ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase ribC riboflavin synthase ribD fused diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase ribE 6,7-dimethyl-8-ribityllumazine synthase
FunGC26	holC DNA polymerase III subunit χ lptF lipopolysaccharide transport system protein LptF lptG lipopolysaccharide transport system protein LptG pepA aminopeptidase A/I and DNA-binding transcriptional repressor PepA
FunGC27	rfbA glucose-1-phosphate thymidylyltransferase 1 rfbB dTDP-glucose 4,6-dehydratase 1 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase rfbD dTDP-4-dehydrorhamnose reductase rffG dTDP-glucose 4,6-dehydratase 2 rffH glucose-1-phosphate thymidylyltransferase 2
FunGC28	rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase wecF TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase wzxE lipid IIIECA flippase wzyE enterobacterial common antigen polymerase wzzE enterobacterial common antigen polysaccharide co-polymerase
FunGC29	gltF periplasmic protein GltF yhcA putative fimbrial chaperone YhcA yhcD putative fimbrial usher protein YhcD yhcF DUF1120 domain-containing protein YhcF
FunGC30	hyaA hydrogenase 1 small subunit hyaB hydrogenase 1 large subunit hyaC hydrogenase 1 cytochrome b subunit hyaD putative hydrogenase 1 maturation protease HyaD hyaE putative HyaA chaperone hyaF protein HyaF hybA hydrogenase 2 [Fe-S] protein hybB hydrogenase 2 membrane subunit hybC hydrogenase 2 large subunit hybD hydrogenase 2 maturation protease hybE hydrogenase 2-specific chaperone hybF hydrogenase maturation protein HybF hybG hydrogenase maturation factor HybG hybO hydrogenase 2 small subunit hycB hydrogenase 3 [Fe-S] protein HycB hycD hydrogenase 3 membrane subunit HycD hycE hydrogenase 3 large subunit hycF hydrogenase 3 [Fe-S] protein HycF hycG hydrogenase 3 [Fe-S] protein HycG hycH formate hydrogenlyase assembly protein hycI hydrogenase 3 maturation protease hydN putative electron transport protein HydN hyfA hydrogenase 4 component A hyfB hydrogenase 4 component B hyfC hydrogenase 4 component C hyfD hydrogenase 4 component D hyfE hydrogenase 4 component E hyfF hydrogenase 4 component F hyfG hydrogenase 4 catalytic subunit HyfG hyfI hydrogenase 4 catalytic subunit HyfI hyfJ putative hydrogenase 4 assembly protein hypA hydrogenase 3 Ni(2+) incorporation protein HypA hypB hydrogenase isozymes Ni(2+) incorporation protein HypB hypC hydrogenase maturation factor HypC hypD Fe-(CN)2CO cofactor assembly scaffold protein HypD hypE HypE-S-carboxamide hypF carbamoyl--[HypE] ligase nikR DNA-binding transcriptional repressor NikR
FunGC31	metI L-methionine/D-methionine ABC transporter membrane subunit metN L-methionine/D-methionine ABC transporter ATP binding subunit metQ L-methionine/D-methionine ABC transporter membrane anchored binding protein tcyL cystine ABC transporter membrane subunit
FunGC32	potF putrescine ABC transporter periplasmic binding protein potG putrescine ABC transporter ATP binding subunit potH putrescine ABC transporter membrane subunit PotH potI putrescine ABC transporter membrane subunit PotI
FunGC33	folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase panB 3-methyl-2-oxobutanoate hydroxymethyltransferase panC pantothenate synthetase panD PanD β cleavage product
FunGC34	gcvH lipoyl-GcvH-protein gcvP glycine decarboxylase gcvT aminomethyltransferase lipA lipoyl synthase lpd lipoamide dehydrogenase
FunGC35	fdhD sulfurtransferase for molybdenum cofactor sulfuration fdhF formate dehydrogenase H moaA GTP 3',8'-cyclase moaB protein MoaB moaC cyclic pyranopterin monophosphate synthase moaE molybdopterin synthase catalytic subunit mobA molybdenum cofactor guanylyltransferase mobB molybdopterin-guanine dinucleotide biosynthesis adaptor protein modA molybdate ABC transporter periplasmic binding protein modB molybdate ABC transporter membrane subunit moeA molybdopterin molybdotransferase moeB molybdopterin synthase adenylyltransferase mogA molybdopterin adenylyltransferase
FunGC36	osmF glycine betaine ABC transporter periplasmic binding protein OsmF yehW glycine betaine ABC transporter membrane subunit YehW yehX glycine betaine ABC transporter ATP binding subunit YehX yehY glycine betaine ABC transporter membrane subunit YehY
FunGC37	yejA oligopeptide ABC transporter periplasmic binding protein YejA yejB putative oligopeptide ABC transporter membrane subunit YejB yejE putative oligopeptide ABC transporter membrane subunit YejE yejF oligopeptide ABC transporter ATP binding subunit YejF
FunGC38	xylA xylose isomerase xylB xylulokinase xylF xylose ABC transporter periplasmic binding protein xylG xylose ABC transporter ATP binding subunit xylH xylose ABC transporter membrane subunit
FunGC39	araA L-arabinose isomerase yjfF galactofuranose ABC transporter putative membrane subunit YjtF ytfQ galactofuranose ABC transporter periplasmic binding protein ytfR galactofuranose ABC transporter putative ATP binding subunit ytfT galactofuranose ABC transporter putative membrane subunit YtfT
FunGC40	gltI glutamate/aspartate ABC transporter periplasmic binding protein gltJ glutamate/aspartate ABC transporter membrane subunit GltJ gltK glutamate/aspartate ABC transporter membrane subunit GltK gltL glutamate/aspartate ABC transporter ATP binding subunit
FunGC41	kduI 5-dehydro-4-deoxy-D-glucuronate isomerase uxaA D-altronate dehydratase uxaB tagaturonate reductase uxaC D-glucoronate/D-galacturonate isomerase uxuA D-mannonate dehydratase
FunGC42	mlaC intermembrane phospholipid transport system - periplasmic binding protein mlaD intermembrane phospholipid transport system, substrate binding protein MlaD mlaE intermembrane phospholipid transport system, integral membrane subunit MlaE mlaF intermembrane phospholipid transport system, ATP binding subunit MlaF
FunGC43	yhdW putative ABC transporter periplasmic binding protein YhdW yhdX putative ABC transporter membrane subunit YhdX yhdY putative ABC transporter membrane subunit YhdY yhdZ putative ABC transporter ATP-binding subunit YhdZ
FunGC44	nrdE ribonucleoside-diphosphate reductase 2, α subunit dimer nrdF ribonucleoside-diphosphate reductase 2, β subunit dimer nrdH glutaredoxin-like protein NrdH nrdI dimanganese-tyrosyl radical cofactor maintenance flavodoxin NrdI
FunGC45	kilR Rac prophage; inhibitor of FtsZ sieB Rac prophage; phage superinfection exclusion protein ydaF Rac prophage; DUF1391 domain-containing protein YdaF ydaG Rac prophage; uncharacterized protein YdaG
FunGC46	insA1 IS1 family protein InsA insA5 IS1 protein InsA insA6 IS1 protein InsA insB1 IS1 family protein InsB
FunGC47	insA2 IS1 protein InsA insA3 IS1 protein InsA insA4 IS1 protein InsA insB2 IS1 protein InsB
FunGC48	glcA glycolate/lactate:H+ symporter GlcA ykgE putative lactate utilization oxidoreductase YkgE ykgF putative amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain ykgG DUF162 domain-containing lactate utilization protein YkgG
FunGC49	yahE DUF2877 domain-containing protein YahE yahF putative acyl-CoA synthetase YahF yahG DUF1116 domain-containing protein YahG yahI carbamate kinase-like protein YahI
FunGC50	btuR cobinamide/cobalamin adenosyltransferase cobC putative adenosylcobalamin phosphatase/α-ribazole phosphatase cobS cobalamin 5'-phosphate synthase cobT nicotinate-nucleotide—dimethylbenzimidazole phosphoribosyltransferase cobU cobinamide-P guanylyltransferase / cobinamide kinase cysG siroheme synthase
FunGC51	ybgD putative fimbrial protein YbgD ybgO putative fimbrial protein YbgO ybgP putative fimbrial chaperone YbgP ybgQ putative fimbrial usher protein YbgQ yqiG putative outer membrane usher protein YqiG
FunGC52	ybhF ABC exporter ATP binding subunit YbhF ybhG HlyD_D23 family protein YbhG ybhR ABC exporter membrane subunit YbhR ybhS ABC exporter membrane subunit YbhS
FunGC53	gsiA glutathione ABC transporter ATP binding subunit GsiA gsiB glutathione ABC transporter periplasmic binding protein gsiC glutathione ABC transporter membrane subunit GsiC gsiD glutathione ABC transporter membrane subunit GsiD
FunGC54	csgB curlin, minor subunit csgE curli assembly component CsgE csgF curli assembly component CsgF csgG curli secretion channel
FunGC55	lpoB outer membrane lipoprotein - activator of MrcB activity thiK thiamine kinase ycfL DUF1425 domain-containing protein YcfL ycfP PF05728 family protein YcfP
FunGC56	mppA murein tripeptide ABC transporter periplasmic binding protein oppA oligopeptide ABC transporter periplasmic binding protein oppB murein tripeptide ABC transporter / oligopeptide ABC transporter inner membrane subunit OppB oppC murein tripeptide ABC transporter / oligopeptide ABC transporter inner membrane subunit OppC oppD murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD oppF murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppF
FunGC57	lsrA Autoinducer-2 ABC transporter ATP binding subunit lsrB Autoinducer-2 ABC transporter periplasmic binding protein lsrC Autoinducer-2 ABC transporter membrane subunit LsrC lsrD Autoinducer-2 ABC transporter membrane subunit LsrD lsrK autoinducer-2 kinase
FunGC58	tus DNA replication terminus site-binding protein ydgH DUF1471 domain-containing protein YdgH ynfB DUF1283 domain-containing protein YnfB ynfD DUF1161 domain-containing protein YnfD
FunGC59	astA arginine N-succinyltransferase astB N-succinylarginine dihydrolase astD aldehyde dehydrogenase astE succinylglutamate desuccinylase
FunGC60	ynjB putative ABC transporter periplasmic binding protein YnjB ynjC putative ABC transporter membrane subunit YnjC ynjD putative ABC transporter ATP-binding protein YnjD ynjF CDP-alcohol phosphatidyltransferase domain-containing protein YnjF
FunGC61	bisC biotin sulfoxide reductase torA trimethylamine N-oxide reductase 1 torC cytochrome c menaquinol dehydrogenase TorC torZ trimethylamine N-oxide reductase 2
FunGC62	yfaA DUF2138 domain-containing protein YfaA yfaP DUF2135 domain-containing protein YfaP yfaQ tandem DUF2300 domain-containing protein YfaQ yfaT DUF1175 domain-containing protein YfaT
FunGC63	hscB [Fe-S] cluster biosynthesis co-chaperone HscB iscR DNA-binding transcriptional dual regulator IscR iscS cysteine desulfurase IscS iscU scaffold protein for [Fe-S] cluster assembly
FunGC64	yfjS CP4-57 prophage; inner membrane lipoprotein YfjS yfjU CP4-57 prophage; putative arsenate reductase-like protein YfjU yfjW CP4-57 prophage; uncharacterized protein YfjW ypjJ CP4-57 prophage; DUF987 domain-containing protein YpjJ
FunGC65	ygbJ putative L-threonate dehydrogenase ygbK putative 3-oxo-tetronate kinase YgbK ygbL putative 3-oxo-tetronate 4-phosphate decarboxylase YgbL ygbM putative 2-oxo-tetronate isomerase YgbM
FunGC66	guaD guanine deaminase hyuA phenylhydantoinase mocA molybdenum cofactor cytidylyltransferase paoA aldehyde dehydrogenase, Fe-S subunit ssnA putative aminohydrolase SsnA xdhA putative xanthine dehydrogenase molybdenum-binding subunit XdhA xdhB putative xanthine dehydrogenase FAD-binding subunit XdhB xdhC putative xanthine dehydrogenase [Fe-S]-binding subunit XdhC xdhD fused putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit and Fe-S binding subunit ygeW putative carbamoyltransferase YgeW ygeX 2,3-diaminopropionate ammonia-lyase ygeY putative peptidase YgeY ygfK putative oxidoreductase, Fe-S subunit ygfM putative oxidoreductase yqeA putative amino acid kinase YqeA yqeB XdhC-CoxI family protein YqeB yqeC uncharacterized protein YqeC
FunGC67	alaS alanine—tRNA ligase/DNA-binding transcriptional repressor mltG endolytic murein transglycosylase rarA replication-associated recombination protein A yqgF ribonuclease H-like domain-containing nuclease
FunGC68	gspE type II secretion system ATPase GspE gspF type II secretion system protein GspF pppA prepilin peptidase yggR Type II/IV secretion system family protein
FunGC69	tusB sulfurtransferase complex subunit TusB tusC sulfurtransferase complex subunit TusC tusD sulfurtransferase complex subunit TusD tusE sulfur transfer protein TusE
FunGC70	ygiB DUF1190 domain-containing protein YgiB yjfI DUF2170 domain-containing protein YjfI yjfJ PspA family protein YjfJ yjfK DUF2491 domain-containing protein YjfK yjfL DUF350 domain-containing inner membrane protein YjfL
FunGC71	hcaB 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase hcaC putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin subunit hcaE putative 3-phenylpropionate/cinnamate dioxygenase subunit α hcaF putative 3-phenylpropionate/cinnamate dioxygenase subunit β
FunGC72	apt adenine phosphoribosyltransferase aspS aspartate—tRNA ligase dtd D-aminoacyl-tRNA deacylase efp protein chain elongation factor EF-P, β-lysyl-Lys34 mltG endolytic murein transglycosylase queA tRNA preQ134 S-adenosylmethionine ribosyltransferase-isomerase rarA replication-associated recombination protein A recN DNA repair protein RecN ruvA Holliday junction branch migration complex subunit RuvA ruvB Holliday junction branch migration complex subunit RuvB ruvC crossover junction endodeoxyribonuclease RuvC secD Sec translocon accessory complex subunit SecD spoT bifunctional (p)ppGpp synthase/hydrolase SpoT yebC putative transcriptional regulator YebC
FunGC73	cyoA cytochrome bo3 subunit 2 cyoB cytochrome bo3 subunit 1 cyoC cytochrome bo3 subunit 3 cyoD cytochrome bo3 subunit 4 cyoE heme O synthase
FunGC74	dapA 4-hydroxy-tetrahydrodipicolinate synthase dapB 4-hydroxy-tetrahydrodipicolinate reductase dapF diaminopimelate epimerase lysA diaminopimelate decarboxylase thrA fused aspartate kinase/homoserine dehydrogenase 1 usg putative semialdehyde dehydrogenase Usg
FunGC75	accA acetyl-CoA carboxyltransferase subunit α accB biotin carboxyl carrier protein accC biotin carboxylase accD acetyl-CoA carboxyltransferase subunit β acpP octanoyl-ACP fabD [acyl-carrier-protein] S-malonyltransferase fabF 3-oxoacyl-[acyl carrier protein] synthase 2 fabG 3-oxoacyl-[acyl-carrier-protein] reductase FabG fabH 3-oxoacyl-[acyl carrier protein] synthase 3 fabZ 3-hydroxy-acyl-[acyl-carrier-protein] dehydratase plsX putative phosphate acyltransferase rnc RNase III rpmF 50S ribosomal subunit protein L32, subunit of ribosome
FunGC76	fepB ferric enterobactin ABC transporter periplasmic binding protein fepC ferric enterobactin ABC transporter ATP binding subunit fepD ferric enterobactin ABC transporter membrane subunit FebD fepG ferric enterobactin ABC transporter membrane subunit FepG
FunGC77	cysG siroheme synthase hemA glutamyl-tRNA reductase hemB porphobilinogen synthase hemC hydroxymethylbilane synthase hemL glutamate-1-semialdehyde 2,1-aminomutase
FunGC78	bamA outer membrane protein assembly factor BamA fabZ 3-hydroxy-acyl-[acyl-carrier-protein] dehydratase hpf ribosome hibernation-promoting factor kdsA 3-deoxy-D-manno-octulosonate 8-phosphate synthase kdsB 3-deoxy-manno-octulosonate cytidylyltransferase kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC kdsD D-arabinose 5-phosphate isomerase KdsD lptA lipopolysaccharide transport system protein LptA lptB lipopolysaccharide transport system ATP binding protein LptB lpxA acyl-[acyl-carrier-protein]—UDP-N-acetylglucosamine O-acyltransferase lpxB lipid A disaccharide synthase lpxC UDP-3-O-acyl-N-acetylglucosamine deacetylase lpxD UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase lpxK tetraacyldisaccharide 4'-kinase mlaE intermembrane phospholipid transport system, integral membrane subunit MlaE ptsN PtsN-N-phospho-L-histidine rpoN RNA polymerase sigma factor RpoN skp periplasmic chaperone Skp waaA KDO transferase
FunGC79	kdpA K+ transporting P-type ATPase subunit KdpA kdpB K+ transporting P-type ATPase subunit KdpB kdpC K+ transporting P-type ATPase subunit KdpC kdpD serine histidine kinase KdpD kdpE KdpE-Phosphorylated
FunGC80	livF branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF livG branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG livH branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH livJ branched chain amino acid/phenylalanine ABC transporter periplasmic binding protein livK L-leucine/L-phenylalanine ABC transporter periplasmic binding protein livM branched chain amino acid/phenylalanine ABC transporter membrane subunit LivM
FunGC81	malE maltose ABC transporter periplasmic binding protein malF maltose ABC transporter membrane subunit MalF malG maltose ABC transporter membrane subunit MalG malZ maltodextrin glucosidase ycjV putative ABC transporter ATP-binding protein YcjV
FunGC82	phoB DNA-binding transcriptional dual regulator PhoB-phosphorylated phoR sensor histidine kinase PhoR phoU phosphate signaling protein PhoU pstA phosphate ABC transporter membrane subunit PstA pstB phosphate ABC transporter ATP binding subunit pstC phosphate ABC transporter membrane subunit PstC pstS phosphate ABC transporter periplasmic binding protein
FunGC83	ftsE cell division protein FtsE prfB peptide chain release factor RF2 secA protein translocation ATPase smpB SsrA-binding protein
FunGC84	rbsA ribose ABC transporter ATP binding subunit rbsB ribose ABC transporter periplasmic binding protein rbsC ribose ABC transporter membrane subunit rbsD D-ribose pyranase rbsK ribokinase rbsR DNA-binding transcriptional dual regulator RbsR
FunGC85	queA tRNA preQ134 S-adenosylmethionine ribosyltransferase-isomerase secD Sec translocon accessory complex subunit SecD secF Sec translocon accessory complex subunit SecF tgt tRNA-guanine transglycosylase yajC Sec translocon accessory complex subunit YajC
FunGC86	sdhB succinate:quinone oxidoreductase, [Fe-S] cluster binding protein sucA 2-oxoglutarate decarboxylase, thiamine-requiring sucC succinyl-CoA synthetase subunit β sucD succinyl-CoA synthetase subunit α
FunGC87	cheA chemotaxis protein CheA(L) cheB CheB-Pasp cheR chemotaxis protein methyltransferase cheW chemotaxis protein CheW cheY CheY-acetylated cheZ chemotaxis protein CheZ csrA carbon storage regulator CsrA, subunit of CsrA complex with McaS RNA flgA flagellar basal body P-ring formation protein FlgA flgB flagellar basal-body rod protein FlgB flgC flagellar basal-body rod protein FlgC flgD flagellar biosynthesis, initiation of hook assembly flgE flagellar hook protein FlgE flgF flagellar basal-body rod protein FlgF flgG flagellar basal-body rod protein FlgG flgH flagellar L-ring protein flgI flagellar P-ring protein flgJ putative peptidoglycan hydrolase FlgJ flgK flagellar hook-filament junction protein 1 flgL flagellar hook-filament junction protein 2 flhA flagellar biosynthesis protein FlhA flhB flagellar biosynthesis protein FlhB fliA RNA polymerase sigma factor FliA fliC flagellar filament structural protein fliD flagellar filament capping protein fliE flagellar protein FliE fliF flagellar basal-body MS-ring and collar protein fliG flagellar motor switch protein FliG fliH flagellar biosynthesis protein FliH fliI flagellar export ATPase FliI fliJ flagellar biosynthesis protein FliJ fliK flagellar hook-length control protein fliL flagellar protein FliL fliM flagellar motor switch protein FliM fliN flagellar motor switch protein FliN fliP flagellar biosynthesis protein FliP fliQ flagellar biosynthesis protein FliQ fliR flagellar biosynthesis protein FliR fliS flagellar biosynthesis protein FliS motA motility protein A motB motility protein B tap methyl-accepting chemotaxis protein - dipeptide-sensing tar methyl-accepting chemotaxis protein Tar trg methyl-accepting chemotaxis protein Trg - ribose/galactose/glucose-sensing tsr methyl-accepting chemotaxis protein - serine-sensing
FunGC88	ugpA sn-glycerol 3-phosphate ABC transporter membrane subunit UgpA ugpB sn-glycerol 3-phosphate ABC transporter periplasmic binding protein ugpC sn-glycerol 3-phosphate ABC transporter ATP binding subunit ugpE sn-glycerol 3-phosphate ABC transporter membrane subunit UgpE ycjO putative ABC transporter membrane subunit YcjO
FunGC89	dxs 1-deoxy-D-xylulose-5-phosphate synthase efp protein chain elongation factor EF-P, β-lysyl-Lys34 ispA geranyl diphosphate/farnesyl diphosphate synthase nusB transcription antitermination protein NusB recN DNA repair protein RecN xseA exodeoxyribonuclease VII subunit XseA xseB exodeoxyribonuclease VII subunit XseB
FunGC90	rimI protein N-acetyltransferase RimI tsaB N6-L-threonylcarbamoyladenine synthase, TsaB subunit tsaD N6-L-threonylcarbamoyladenine synthase, TsaD subunit tsaE N6-L-threonylcarbamoyladenine synthase, TsaE subunit
FunGC91	gmhB D-glycero-β-D-manno-heptose-1,7-bisphosphate 7-phosphatase hldE fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase rfaD ADP-L-glycero-D-mannoheptose 6-epimerase waaC ADP-heptose:LPS heptosyltransferase 1 waaF ADP-heptose—LPS heptosyltransferase 2
FunGC92	lipA lipoyl synthase lipB lipoyl(octanoyl) transferase lpd lipoamide dehydrogenase sucB dihydrolipoyl-[2-oxoglutarate dehydrogenase E2 subunit]
FunGC93	fdhE formate dehydrogenase formation protein fdnG formate dehydrogenase N subunit α fdnH formate dehydrogenase N subunit β fdoG formate dehydrogenase O subunit α fdoH formate dehydrogenase O subunit β fdoI formate dehydrogenase O subunit γ selA selenocysteine synthase selB SelB-L-selenocysteinyl-tRNAsec selD selenide, water dikinase
FunGC94	rhaA L-rhamnose isomerase rhaB rhamnulokinase rhaD rhamnulose-1-phosphate aldolase rhaM L-rhamnose mutarotase rhaT rhamnose/lyxose:H+ symporter
FunGC95	yehI DUF4132 domain-containing protein YehI yehL putative AAA+ MoxR family ATPase YehL yehM uncharacterized protein YehM yehP VWA domain-containing protein YehP yehQ SWIM zinc finger domains-containing protein YehQ
FunGC96	nikA Ni(2+) ABC transporter periplasmic binding protein nikB Ni(2+) ABC transporter membrane subunit NikB nikC Ni(2+) ABC transporter membrane subunit NikC nikD Ni(2+) ABC transporter ATP binding subunit NikD nikE Ni(2+) ABC transporter ATP binding subunit NikE
FunGC97	fdx oxidized ferredoxin hscA [Fe-S] cluster biosynthesis chaperone HscA hscB [Fe-S] cluster biosynthesis co-chaperone HscB iscA [Fe-S] cluster insertion protein IscA iscU scaffold protein for [Fe-S] cluster assembly iscX accessory [Fe-S] cluster assembly protein IscX
FunGC98	napA periplasmic nitrate reductase subunit NapA napB periplasmic nitrate reductase cytochrome c550 protein napC periplasmic nitrate reductase cytochrome c protein napD NapA signal peptide-binding chaperone NapD napF ferredoxin-type protein napG ferredoxin-type protein NapG napH ferredoxin-type protein NapH
FunGC99	yadC fimbrial tip-adhesin YadC yadK putative fimbrial protein YadK yadL putative fimbrial protein YadL yadM putative fimbrial protein YadM yadN putative fimbrial protein YadN
FunGC100	gatA galactitol-specific PTS enzyme IIA component gatB galactitol-specific PTS enzyme IIB component gatC galactitol-specific PTS enzyme IIC component gatD galactitol-1-phosphate 5-dehydrogenase
FunGC101	dppA dipeptide ABC transporter periplasmic binding protein dppB dipeptide ABC transporter membrane subunit DppB dppC dipeptide ABC transporter membrane subunit DppC dppD dipeptide ABC transporter ATP binding subunit DppD dppF dipeptide ABC transporter ATP binding subunit DppF
FunGC102	diaA DnaA initiator-associating protein DiaA dolP division and outer membrane stress-associated lipid-binding lipoprotein lpoA outer membrane lipoprotein - activator of MrcA activity yraN PF02021 family protein YraN
FunGC103	ftsH ATP-dependent zinc metalloprotease FtsH hpt hypoxanthine phosphoribosyltransferase pth peptidyl-tRNA hydrolase tilS tRNAIle-lysidine synthetase
FunGC104	insE1 IS3 element protein InsE insE2 IS3 element protein InsE insE3 DLP12 prophage; IS3 element protein InsE insE4 IS3 element protein InsE insE5 IS3 element protein InsE
FunGC105	iprA putative DNA-binding transcriptional regulator IprA iraP anti-adaptor protein IraP yaiU yaiY DUF2755 domain-containing inner membrane protein YaiY yaiZ DUF2754 domain-containing protein YaiZ
FunGC106	elfC putative fimbrial usher protein ElfC sfmA putative fimbrial protein SfmA sfmC putative fimbrial chaperone SfmC sfmD putative fimbrial usher protein SfmD sfmF putative fimbrial protein SfmF sfmH putative fimbrial adhesin protein SfmH
FunGC107	ssuA aliphatic sulfonate ABC transporter periplasmic binding protein ssuB aliphatic sulfonate ABC transporter ATP binding subunit ssuC aliphatic sulfonate ABC transporter membrane subunit ssuD FMNH2-dependent alkanesulfonate monooxygenase ssuE NADPH-dependent FMN reductase
FunGC108	patD γ-aminobutyraldehyde dehydrogenase ydcS putative ABC transporter periplasmic binding protein / polyhydroxybutyrate synthase ydcT putative ABC transporter ATP-binding protein YdcT ydcU putative ABC transporter membrane subunit YdcU ydcV putative ABC transporter membrane subunit YdcV
FunGC109	ddpA putative D,D-dipeptide ABC transporter periplasmic binding protein ddpB putative D,D-dipeptide ABC transporter membrane subunit DdpB ddpC putative D,D-dipeptide ABC transporter membrane subunit DdpC ddpD putative D,D-dipeptide ABC transporter ATP-binding subunit DdpD ddpF putative D,D-dipeptide ABC transporter ATP-binding subunit DdpF
FunGC110	sufA [Fe-S] cluster insertion protein SufA sufB Fe-S cluster scaffold complex subunit SufB sufC Fe-S cluster scaffold complex subunit SufC sufD Fe-S cluster scaffold complex subunit SufD sufE sulfur carrier protein SufE sufS L-cysteine desulfurase SufS
FunGC111	thiC phosphomethylpyrimidine synthase thiD hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase thiE thiamine phosphate synthase thiG 1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase
FunGC112	yfcP putative fimbrial protein YfcP yfcQ putative fimbrial protein YfcQ yfcR putative fimbrial protein YfcR yfcS putative fimbrial chaperone YfcS yfcU putative outer membrane usher protein YfcU ygiL putative fimbrial protein YgiL
FunGC113	recO recombination mediator protein RecO rseA anti-sigma-E factor RseA rseB anti-sigma factor stabilizing protein RseB rseC regulatory protein RseC
FunGC114	agaC galactosamine-specific PTS enzyme IIC component agaD galactosamine-specific PTS enzyme IID component agaS putative galactosamine-6-phosphate deaminase/isomerase agaV N-acetyl-D-galactosamine specific PTS enzyme IIB component agaW N-acetyl-D-galactosamine specific PTS truncated enzyme IIC component
FunGC115	dmsA dimethyl sulfoxide reductase subunit A dmsB dimethyl sulfoxide reductase subunit B dmsC dimethyl sulfoxide reductase subunit C dmsD redox enzyme maturation protein DmsD ynfE putative selenate reductase YnfE ynfF putative selenate reductase YnfF ynfH putative menaquinol dehydrogenase
FunGC116	acrA multidrug efflux pump membrane fusion lipoprotein AcrA acrB multidrug efflux pump RND permease AcrB acrD multidrug efflux pump RND permease AcrD acrE multidrug efflux pump membrane fusion lipoprotein AcrE acrF multidrug efflux pump RND permease AcrF cusC copper/silver export system outer membrane channel mdtE multidrug efflux pump membrane fusion protein MdtE mdtF multidrug efflux pump RND permease MdtF
FunGC117	infC translation initiation factor IF-3 pheS phenylalanine—tRNA ligase pheT phenylalanine—tRNA ligase subunit β rplT 50S ribosomal subunit protein L20, subunit of ribosome rpmI 50S ribosomal subunit protein L35, subunit of ribosome thrS threonine—tRNA ligase
FunGC118	cpoB cell division coordinator CpoB exbD Ton complex subunit ExbD pal peptidoglycan-associated outer membrane lipoprotein Pal tolB Tol-Pal system periplasmic protein TolB tolQ Tol-Pal system protein TolQ tolR Tol-Pal system protein TolR ybgC esterase/thioesterase
FunGC119	feoB Fe2+ transporter FeoB hcp protein S-nitrosylase norV reduced flavorubredoxin rlhA 23S rRNA 5-hydroxycytidine C2501 synthase ttdA L(+)-tartrate dehydratase subunit α ydbK putative pyruvate-flavodoxin oxidoreductase yjiL putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehdratase
FunGC120	mnmE 5-carboxymethylaminomethyluridine-tRNA synthase GTPase subunit mnmG 5-carboxymethylaminomethyluridine-tRNA synthase subunit MnmG mutL DNA mismatch repair protein MutL mutS DNA mismatch repair protein MutS prmA ribosomal protein L11 methyltransferase queA tRNA preQ134 S-adenosylmethionine ribosyltransferase-isomerase recJ ssDNA-specific exonuclease RecJ rlmH 23S rRNA m3Ψ1915 methyltransferase yicR RadC-like JAB domain-containing protein YicR yihA GTP-binding protein YihA
FunGC121	entC isochorismate synthase EntC menA 1,4-dihydroxy-2-naphthoate octaprenyltransferase menB 1,4-dihydroxy-2-naphthoyl-CoA synthase menC o-succinylbenzoate synthase menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase menE o-succinylbenzoate—CoA ligase menF isochorismate synthase MenF menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
FunGC122	sgbU putative L-xylulose 5-phosphate 3-epimerase ulaA L-ascorbate specific PTS enzyme IIC component ulaB L-ascorbate specific PTS enzyme IIB component ulaC L-ascorbate specific PTS enzyme IIA component ulaD 3-keto-L-gulonate-6-phosphate decarboxylase UlaD ulaE L-ribulose-5-phosphate 3-epimerase UlaE ulaG L-ascorbate-6-phosphate lactonase
FunGC123	insEF1 IS3 element transposase insEF2 IS3 element transposase insEF3 IS3 element transposase insEF4 IS3 element transposase insEF5 IS3 element transposase insX
FunGC124	allB allantoinase carA carbamoyl-phosphate synthetase small subunit carB carbamoyl-phosphate synthetase large subunit dfp fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase pyrB aspartate carbamoyltransferase catalytic subunit
FunGC125	citC citrate lyase synthetase citD citrate lyase [acyl carrier protein] component citE citrate lyase, citryl-acyl carrrier protein lyase component citF citrate lyase, citrate-acyl carrier protein transferase component citG triphosphoribosyl-dephospho-CoA synthase citX apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
FunGC126	ftp FAD:protein FMN transferase rsxA SoxR [2Fe-2S] reducing system protein RsxA rsxB SoxR [2Fe-2S] reducing system protein RsxB rsxC SoxR [2Fe-2S] reducing system protein RsxC rsxD SoxR [2Fe-2S] reducing system protein RsxD rsxE SoxR [2Fe-2S] reducing system protein RsxE rsxG SoxR [2Fe-2S] reducing system flavoprotein RsxG
FunGC127	hyfH hydrogenase 4 component H nuoA NADH:quinone oxidoreductase subunit A nuoB NADH:quinone oxidoreductase subunit B nuoC NADH:quinone oxidoreductase subunit CD nuoE NADH:quinone oxidoreductase subunit E nuoF NADH:quinone oxidoreductase subunit F nuoG NADH:quinone oxidoreductase subunit G nuoH NADH:quinone oxidoreductase subunit H nuoI NADH:quinone oxidoreductase subunit I nuoJ NADH:quinone oxidoreductase subunit J nuoK NADH:quinone oxidoreductase subunit K nuoL NADH:quinone oxidoreductase subunit L nuoM NADH:quinone oxidoreductase subunit M nuoN NADH:quinone oxidoreductase subunit N
FunGC128	hcaB 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase hcaF putative 3-phenylpropionate/cinnamate dioxygenase subunit β mhpB 3-carboxyethylcatechol 2,3-dioxygenase mhpD 2-hydroxypentadienoate hydratase mhpE 4-hydroxy-2-oxovalerate aldolase mhpF acetaldehyde dehydrogenase (acetylating) MhpF
FunGC129	cysS cysteine—tRNA ligase gltX glutamate—tRNA ligase ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase radA DNA recombination protein rlmB 23S rRNA 2'-O-ribose G2251 methyltransferase
FunGC130	ibaG acid stress protein IbaG mlaC intermembrane phospholipid transport system - periplasmic binding protein mlaD intermembrane phospholipid transport system, substrate binding protein MlaD sspB ClpXP protease specificity-enhancing factor
FunGC131	gspD type II secretion system secretin GspDα gspE type II secretion system ATPase GspE gspF type II secretion system protein GspF gspG type II secretion system major pseudopilin GspG gspH type II secretion system minor pseudopilin GspH gspI type II secretion system minor pseudopilin GspI gspJ type II secretion system minor pseudopilin GspJ gspK type II secretion system minor pseudopilin GspK gspL type II secretion system protein GspL yghD putative type II secretion system M-type protein YghD yghF putative type II secretion system C-type protein YghF
FunGC132	atpA ATP synthase F1 complex subunit α atpB ATP synthase Fo complex subunit a atpC ATP synthase F1 complex subunit ε atpD ATP synthase F1 complex subunit β atpE ATP synthase Fo complex - subunit c atpF ATP synthase Fo complex - subunit b atpG ATP synthase F1 complex subunit γ atpH ATP synthase F1 complex subunit δ murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase prfA peptide chain release factor RF1 prmC protein-(glutamine-N5) methyltransferase
FunGC133	flgA flagellar basal body P-ring formation protein FlgA flhC DNA-binding transcriptional dual regulator FlhC flhD DNA-binding transcriptional dual regulator FlhD fliL flagellar protein FliL
FunGC134	flhC DNA-binding transcriptional dual regulator FlhC flhD DNA-binding transcriptional dual regulator FlhD motA motility protein A motB motility protein B
FunGC135	glgA glycogen synthase glgB 1,4-α-glucan branching enzyme glgC glucose-1-phosphate adenylyltransferase glgP glycogen phosphorylase glgX limit dextrin α-1,6-glucohydrolase malP maltodextrin phosphorylase malQ 4-α-glucanotransferase
FunGC136	gapA glyceraldehyde-3-phosphate dehydrogenase pgk phosphoglycerate kinase rapZ RNase adaptor protein RapZ, subunit of RapZ-GlmZ-RnaseE tpiA triose-phosphate isomerase uvrA UvrABC excision nuclease subunit A uvrC UvrABC excision nuclease subunit C ybhK putative transferase YbhK
FunGC137	ccmA cytochrome c maturation protein A ccmB cytochrome c maturation protein B ccmC cytochrome c maturation protein C ccmE periplasmic heme chaperone ccmF holocytochrome c synthase CcmF component ccmG thiol:disulfide oxidoreductase CcmG ccmH holocytochrome c synthase CcmH component nrfG putative formate-dependent nitrite reductase complex subunit NrfG
FunGC138	bcsA cellulose synthase catalytic subunit bcsB cellulose synthase periplasmic subunit bcsC cellulose synthase outer membrane channel bcsE c-di-GMP-binding protein BcsE bcsG cellulose phosphoethanolamine transferase bcsQ cellulose biosynthesis protein bcsZ endo-1,4-D-glucanase
FunGC139	malE maltose ABC transporter periplasmic binding protein ycjO putative ABC transporter membrane subunit YcjO ycjP putative ABC transporter membrane subunit YcjP ycjV putative ABC transporter ATP-binding protein YcjV
FunGC140	eutA ethanolamine ammonia-lyase reactivase EutA eutB ethanolamine ammonia-lyase subunit α eutC ethanolamine ammonia-lyase subunit β eutE acetaldehyde dehydrogenase (acetylating) EutE eutH putative ethanolamine permease EutH eutJ putative ethanolamine utilization chaperonin EutJ eutK putative structural protein, ethanolamine utilization microcompartment eutL predicted structural protein, ethanolamine utilization microcompartment eutM putative ethanolamine catabolic microcompartment shell protein EutM eutN putative ethanolamine catabolic microcompartment shell protein EutN eutP putative ethanolamine utilization acetate kinase EutP eutQ putative ethanolamine utilization acetate kinase EutQ eutS putative ethanolamine catabolic microcompartment shell protein EutS eutT putative ethanolamine utilization cobalamin adenosyltransferase
FunGC141	php putative hydrolase yhfS putative aminotransferase YhfS yhfT uncharacterized protein YhfT yhfU DUF2620 domain-containing protein YhfU yhfW putative mutase YhfW yhfX putative PLP-binding protein YhfX yhfY PRD domain-containing protein YhfY yhfZ putative DNA-binding transcriptional regulator YhfZ
FunGC142	aroA 3-phosphoshikimate 1-carboxyvinyltransferase aroB 3-dehydroquinate synthase aroC chorismate synthase ydiB shikimate dehydrogenase / quinate dehydrogenase
FunGC143	argG argininosuccinate synthetase argH argininosuccinate lyase carA carbamoyl-phosphate synthetase small subunit carB carbamoyl-phosphate synthetase large subunit
FunGC144	narG nitrate reductase A subunit α narH nitrate reductase A subunit β narI nitrate reductase A subunit γ narJ nitrate reductase 1 molybdenum cofactor assembly chaperone narK nitrate:nitrite antiporter NarK narV nitrate reductase Z subunit γ narW NarW, putative private chaperone for NarZ nitrate reductase subunit narY nitrate reductase Z subunit β narZ nitrate reductase Z subunit α
FunGC145	dnaA chromosomal replication initiator protein DnaA dnaB replicative DNA helicase dnaN β sliding clamp gyrA DNA gyrase subunit A gyrB DNA gyrase subunit B mnmE 5-carboxymethylaminomethyluridine-tRNA synthase GTPase subunit mnmG 5-carboxymethylaminomethyluridine-tRNA synthase subunit MnmG pth peptidyl-tRNA hydrolase recF recombination mediator protein RecF recR recombination mediator protein RecR rlmB 23S rRNA 2'-O-ribose G2251 methyltransferase rnpA RNase P protein component rplI 50S ribosomal subunit protein L9, subunit of ribosome rpmH 50S ribosomal subunit protein L34, subunit of ribosome rpsF 30S ribosomal subunit protein S6, subunit of ribosome rpsR 30S ribosomal subunit protein S18, subunit of ribosome rsmG 16S rRNA m7G527 methyltransferase rsmI 16S rRNA 2'-O-ribose C1402 methyltransferase ssb ssDNA-binding protein tilS tRNAIle-lysidine synthetase yidC membrane protein insertase YidC yidD membrane protein insertion efficiency factor
FunGC146	araA L-arabinose isomerase xylA xylose isomerase xylB xylulokinase yagH CP4-6 prophage; putative xylosidase/arabinosidase
FunGC147	guaA GMP synthetase purA adenylosuccinate synthetase purB adenylosuccinate lyase purC phosphoribosylaminoimidazole-succinocarboxamide synthase purD phosphoribosylamine—glycine ligase purE N5-carboxyaminoimidazole ribonucleotide mutase purF amidophosphoribosyltransferase purH bifunctional AICAR transformylase/IMP cyclohydrolase purL phosphoribosylformylglycinamide synthetase purM phosphoribosylformylglycinamide cyclo-ligase purN phosphoribosylglycinamide formyltransferase 1 pyrB aspartate carbamoyltransferase catalytic subunit
FunGC148	cas1 multifunctional nuclease Cas1 cas2 CRISPR-associated endoribonuclease Cas2 cas3 CRISPR-associated endonuclease/helicase Cas3 casA type I-E CRISPR system Cascade subunit CasA casB type I-E CRISPR system Cascade subunit CasB casC type I-E CRISPR system Cascade subunit CasC casD type I-E CRISPR system Cascade subunit CasD casE pre-CRISPR RNA endonuclease
FunGC149	paaA phenylacetyl-CoA 1,2-epoxidase, monooxygenase subunit paaB phenylacetyl-CoA 1,2-epoxidase subunit B paaC phenylacetyl-CoA 1,2-epoxidase, structural subunit paaD phenylacetate degradation protein paaE phenylacetyl-CoA 1,2-epoxidase, reductase subunit paaG putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) paaH 3-hydroxyadipyl-CoA dehydrogenase paaI phenylacetyl-CoA thioesterase paaJ β-ketoadipyl-CoA thiolase paaK phenylacetate-CoA ligase paaX DNA-binding transcriptional repressor PaaX paaZ oxepin-CoA hydrolase [multifunctional]
FunGC150	era 30S ribosomal subunit maturation GTPase Era lepA 30S ribosomal subunit biogenesis factor LepA lepB signal peptidase I rnc RNase III
FunGC151	insH1 CP4-6 prophage; IS5 transposase and trans-activator insH10 IS5 transposase and trans-activator insH11 IS5 transposase and trans-activator insH2 DLP12 prophage; IS5 transposase and trans-activator insH3 IS5 transposase and trans-activator insH4 IS5 transposase and trans-activator insH7 IS5 transposase and trans-activator insH8 IS5 transposase and trans-activator insH9 IS5 transposase and trans-activator
FunGC152	adk adenylate kinase fusA elongation factor G gltX glutamate—tRNA ligase infA translation initiation factor IF-1 map methionine aminopeptidase nusG transcription termination/antitermination factor NusG rlmB 23S rRNA 2'-O-ribose G2251 methyltransferase rplA 50S ribosomal subunit protein L1, subunit of ribosome rplB 50S ribosomal subunit protein L2, subunit of ribosome rplC 50S ribosomal subunit protein L3, subunit of ribosome rplD 50S ribosomal subunit protein L4, subunit of ribosome rplE 50S ribosomal subunit protein L5, subunit of ribosome rplF 50S ribosomal subunit protein L6, subunit of ribosome rplJ 50S ribosomal subunit protein L10 rplK 50S ribosomal subunit protein L11, subunit of ribosome rplL 50S ribosomal subunit protein L7 rplM 50S ribosomal subunit protein L13, subunit of ribosome rplN 50S ribosomal subunit protein L14, subunit of ribosome rplO 50S ribosomal subunit protein L15, subunit of ribosome rplP 50S ribosomal subunit protein L16, subunit of ribosome rplQ 50S ribosomal subunit protein L17, subunit of ribosome rplR 50S ribosomal subunit protein L18, subunit of ribosome rplV 50S ribosomal subunit protein L22, subunit of ribosome rplW 50S ribosomal subunit protein L23, subunit of ribosome rplX 50S ribosomal subunit protein L24, subunit of ribosome rpmC 50S ribosomal subunit protein L29, subunit of ribosome rpmD 50S ribosomal subunit protein L30, subunit of ribosome rpmJ 50S ribosomal subunit protein L36, subunit of ribosome rpoA RNA polymerase subunit α rpoB RNA polymerase subunit β rpoC RNA polymerase subunit β' rpsC 30S ribosomal subunit protein S3, subunit of ribosome rpsD 30S ribosomal subunit protein S4, subunit of ribosome rpsE 30S ribosomal subunit protein S5, subunit of ribosome rpsG 30S ribosomal subunit protein S7, subunit of ribosome rpsH 30S ribosomal subunit protein S8, subunit of ribosome rpsI 30S ribosomal subunit protein S9, subunit of ribosome rpsJ 30S ribosomal subunit protein S10, subunit of ribosome rpsK 30S ribosomal subunit protein S11, subunit of ribosome rpsL 30S ribosomal subunit protein S12, subunit of ribosome rpsM 30S ribosomal subunit protein S13, subunit of ribosome rpsN 30S ribosomal subunit protein S14, subunit of ribosome rpsQ 30S ribosomal subunit protein S17, subunit of ribosome rpsS 30S ribosomal subunit protein S19, subunit of ribosome secY Sec translocon subunit SecY truA tRNA pseudouridine38-40 synthase tufB translation elongation factor Tu 2
FunGC153	der 50S ribosomal subunit stability factor dnaE DNA polymerase III subunit α infC translation initiation factor IF-3 polA DNA polymerase I rplT 50S ribosomal subunit protein L20, subunit of ribosome rpsA 30S ribosomal subunit protein S1, subunit of ribosome tyrS tyrosine—tRNA ligase
FunGC154	phnC phosphonate/phosphate ABC transporter ATP binding subunit phnD phosphonate/phosphate ABC transporter periplasmic binding protein phnE1 phosphonate/phosphate ABC transporter membrane subunit PhnE1 phnF putative transcriptional regulator PhnF phnG carbon-phosphorus lyase core complex subunit PhnG phnH carbon-phosphorus lyase core complex subunit PhnH phnI carbon-phosphorus lyase core complex subunit PhnI phnJ carbon-phosphorus lyase core complex subunit PhnJ phnK carbon-phosphorus lyase ATP-binding protein PhnK phnL carbon-phosphorus lyase ATP-binding protein PhnL phnM RPnTP hydrolase phnN ribose 1,5-bisphosphate phosphokinase
FunGC155	insC1 IS2 insertion element repressor InsA insC2 IS2 insertion element repressor InsA insC3 CP4-44 prophage; IS2 insertion element repressor InsA insC4 IS2 insertion element repressor InsA insC5 IS2 insertion element repressor InsA insC6 KpLE2 phage-like element; IS2 insertion element repressor InsA insCD1 IS2 element transposase InsAB' insCD2 IS2 element transposase InsAB' insCD3 IS2 element transposase InsAB' insCD4 IS2 element transposase InsAB' insCD5 IS2 element transposase InsAB' insCD6 IS2 element transposase InsAB'
FunGC156	hemW heme chaperone HemW pnp polynucleotide phosphorylase rlmN 23S rRNA m2A2503 methyltransferase/tRNA m2A37 methyltransferase yggS PLP homeostasis protein

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Please cite the following article in publications resulting from the use of EcoCyc: Frontiers in Microbiology 2021
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