enterica serovar "Typhimurium" str. ST4/74
for which no corresponding enzyme has been identified in the genome.
The presence of those enzymes is suggested by the presence of the
pathway.
93 pathway holes (8.2%) are present in the 1136 total reactions of 376 pathways
|
Reaction |
EC# |
Pathway(s) needing this reaction |
|
carboxy-adenylated [molybdopterin-synthase sulfur-carrier protein subunit] + an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + reduced two electron carrier → thiocarboxylated [molybdopterin-synthase sulfur-carrier protein subunit] + an [L-cysteine desulfurase]-L-cysteine + AMP + oxidized electron carrier + H+ |
2.8.1.11 |
molybdopterin biosynthesis |
|
selenodiglutathione + NADPH + H+ → glutathioselenol + glutathione + NADP+ |
1.8.1.- |
selenate reduction |
|
hydrogen selenide + glutathione + NADP+ ← glutathioselenol + NADPH + H+ |
1.8.1.- |
selenate reduction |
|
selenite + AMP + glutathione disulfide + 2 H+ ← adenosine 5'-phosphoselenate + 2 glutathione |
1.8.4.9 |
selenate reduction |
|
octadecanal + 2 NADPH + oxygen + H+ → heptadecane + formate + 2 NADP+ + H2O |
4.1.99.5 |
heptadecane biosynthesis |
|
octadecanal + acyl-carrier protein + NAD(P)+ ← stearoyl-[acp] + NAD(P)H + H+ |
1.2.1.80 |
heptadecane biosynthesis |
|
dihydroxyacetone + ATP → glycerone phosphate + ADP + H+ |
2.7.1.29 |
glycerol degradation II |
|
a chitodextrin + n H2O → n N,N'-diacetylchitobiose + N,N',N''-triacetylchitotriose |
3.2.1.202 |
chitin degradation II (Vibrio) |
|
5-hexenoyl-[acp] + 2 reduced ferredoxin [iron-sulfur] cluster + oxygen + 2 H+ → 5-hexynoyl-[acp] + 2 oxidized ferredoxin [iron-sulfur] cluster + 2 H2O |
[none] |
5-hexynoate biosynthesis |
|
hexanoyl-[acp] + 2 reduced ferredoxin [iron-sulfur] cluster + oxygen + 2 H+ → 5-hexenoyl-[acp] + 2 oxidized ferredoxin [iron-sulfur] cluster + 2 H2O |
[none] |
5-hexynoate biosynthesis |
|
[cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex + [Fe-S cluster biosynthesis co-chaperone] → [co-chaperone]-[scaffold protein-(2Fe-2S)] complex + [L-cysteine desulfurase] |
[none] |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
[cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex + 2 Fe3+ → [cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex |
[none] |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
3-phospho-D-glycerate + GDP-α-D-mannose → 2-O-(α-D-mannosyl)-3-phospho-D-glycerate + GDP + H+ |
2.4.1.217 |
mannosylglycerate biosynthesis I |
|
a β-D-glucuronide + H2O → D-glucopyranuronate + an alcohol |
3.2.1.31 |
beta-D-glucuronide and D-glucuronate degradation |
|
GDP-α-D-mannose + α-L-Rha-(1→3)-α-D-Gal-PP-Und → β-D-Man--(1→4)-α-L-Rha-(1→3)-α-D-Gal-PP-Und + GDP + H+ |
2.4.1.- |
group E Salmonella O antigen biosynthesis |
|
GDP-4-dehydro-α-D-rhamnose + L-glutamate → 2-GDP-[(2S,3S,6R)-5-amino-6-methyl-3,6-dihydro-2H-pyran-3-ol] + 2-oxoglutarate + H2O + H+ |
[none] |
GDP-L-colitose biosynthesis |
|
2'-deoxycytidine + a nucleoside triphosphate → dCMP + a nucleoside diphosphate + H+ |
2.7.1.74 |
pyrimidine deoxyribonucleosides salvage |
|
5-dehydro-2-deoxy-D-gluconate 6-phosphate → 3-oxopropanoate + glycerone phosphate |
4.1.2.29 |
myo-inositol degradation I |
|
hydrogen sulfide + a [DsrC protein]-dithiol + 2 a quinone ← a [DsrC protein]-trisulfide + 2 a quinol |
1.8.5.- |
dissimilatory sulfate reduction I (to hydrogen sufide)) |
|
sulfite + AMP + oxidized electron carrier + 2 H+ ← adenosine 5'-phosphosulfate + reduced two electron carrier |
1.8.99.2 |
dissimilatory sulfate reduction I (to hydrogen sufide)) |
|
oxidized thioredoxin + reduced two electron carrier ← reduced thioredoxin + oxidized electron carrier |
[none] |
thioredoxin pathway |
|
cobalt-factor III + reduced two electron carrier → cobalt-precorrin-3 + oxidized electron carrier |
[none] |
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) |
|
glycolate + oxidized electron carrier → glyoxylate + reduced two electron carrier |
1.1.99.14 |
glycolate and glyoxylate degradation I |
|
glutathione → L-cysteinylglycine + 5-oxo-L-proline |
4.3.2.7 |
5-oxo-L-proline metabolism |
|
[protein] with an N-terminal 5-oxo-L-proline + H2O → 5-oxo-L-proline + peptide |
3.4.19.3 |
5-oxo-L-proline metabolism |
|
diethylthiophosphate + H2O → diethylphosphate + hydrogen sulfide |
3.13.1.- |
parathion degradation,
chlorpyrifos degradation |
|
a hydroperoxy-fatty-acyl-[lipid] + 2 glutathione → glutathione disulfide + a hydroxy-fatty-acyl-[lipid] + H2O |
1.11.1.12 |
glutathione-peroxide redox reactions |
|
glycolaldehyde + NAD+ + H2O → glycolate + NADH + 2 H+ |
1.2.1.21 |
ethylene glycol degradation,
D-arabinose degradation I |
|
guanosine + H2O → D-ribofuranose + guanine |
3.2.2.1 |
guanine and guanosine salvage II |
|
3-hydroxypropanoyl-CoA ↔ acryloyl-CoA + H2O |
4.2.1.116 |
acrylate degradation II |
|
propanoyl-CoA + NADP+ ← acryloyl-CoA + NADPH + H+ |
1.3.1.84 |
acrylate degradation II |
|
phosphoenolpyruvate + dihydroxyacetone → pyruvate + glycerone phosphate |
2.7.1.121 |
glycerol degradation V |
|
3-chlorobenzoate + H2O → 3-hydroxybenzoate + chloride + H+ |
[none] |
3-chlorobenzoate degradation III (via gentisate) |
|
2-deoxy-D-glucose + oxygen → 2-deoxy-D-glucono-1,5-lactone + hydrogen peroxide |
1.1.3.4 |
2-deoxy-D-glucose 6-phosphate degradation |
|
hypoxanthine + NAD+ + H2O → xanthine + NADH + H+ |
1.17.1.4 |
adenosine nucleotides degradation II |
|
a debranched α-limit dextrin + n H2O → n D-glucopyranose |
3.2.1.3 |
glycogen degradation II |
|
CDP-4-dehydro-6-deoxy-α-D-glucose ↔ CDP-4-dehydro-6-deoxy-α-D-gulose |
5.1.3.- |
CDP-6-deoxy-D-gulose biosynthesis |
|
CDP-4-dehydro-6-deoxy-α-D-gulose + NADPH + H+ → CDP-6-deoxy-α-D-gulose + NADP+ |
1.1.1.- |
CDP-6-deoxy-D-gulose biosynthesis |
|
N1-(3-aminopropyl)agmatine + H2O → spermidine + urea |
3.5.3.24 |
spermidine biosynthesis III |
|
an apo-[hydroxymethylbilane synthase]-L-cysteine + preuroporphyrinogen → a [hydroxymethylbilane synthase] ES2 intermediate + H2O |
[none] |
dipyrromethane cofactor biosynthesis |
|
L-arginine + H2O → urea + L-ornithine |
3.5.3.1 |
urea cycle,
putrescine biosynthesis III |
|
γ-butyrobetainyl-CoA + L-carnitine → γ-butyrobetaine + (R)-carnitinyl-CoA |
2.8.3.21 |
L-carnitine degradation I |
|
D-gluconate 6-phosphate + NAD+ → D-ribulose 5-phosphate + CO2 + NADH |
1.1.1.343 |
formaldehyde oxidation I |
|
L-cysteine + 2-oxoglutarate ↔ 2-oxo-3-sulfanylpropanoate + L-glutamate |
2.6.1.3 |
L-cysteine degradation III |
|
NADP+ + H2O → NAD+ + phosphate |
3.1.3.108 |
NAD salvage pathway III (to nicotinamide riboside) |
|
formate + oxidized hydrogenase → CO2 + reduced hydrogenase |
1.17.98.e |
hydrogen production V |
|
4-fumaryl-acetoacetate + H2O → fumarate + acetoacetate + H+ |
3.7.1.2 |
L-tyrosine degradation I |
|
homogentisate + oxygen → 4-maleyl-acetoacetate + H+ |
1.13.11.5 |
L-tyrosine degradation I |
|
3-(4-hydroxyphenyl)pyruvate + oxygen → CO2 + homogentisate |
1.13.11.27 |
L-tyrosine degradation I |
|
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide → a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide + di-trans,octa-cis-undecaprenyl diphosphate + H+ |
[none] |
peptidoglycan maturation (meso-diaminopimelate containing) |
|
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide → a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide + di-trans,octa-cis-undecaprenyl diphosphate + H+ |
[none] |
peptidoglycan maturation (meso-diaminopimelate containing) |
|
a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing) → a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing) + di-trans,octa-cis-undecaprenyl diphosphate + H+ |
[none] |
peptidoglycan maturation (meso-diaminopimelate containing) |
|
a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing) → a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing) + di-trans,octa-cis-undecaprenyl diphosphate + H+ |
[none] |
peptidoglycan maturation (meso-diaminopimelate containing) |
|
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide → a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide + di-trans,octa-cis-undecaprenyl diphosphate + H+ |
[none] |
peptidoglycan maturation (meso-diaminopimelate containing) |
|
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide → a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide + di-trans,octa-cis-undecaprenyl diphosphate + H+ |
[none] |
peptidoglycan maturation (meso-diaminopimelate containing) |
|
2,5-dioxopentanoate + NADP+ + H2O → 2-oxoglutarate + NADPH + 2 H+ |
1.2.1.26 |
D-glucarate degradation II,
D-galactarate degradation II |
|
5-dehydro-4-deoxy-D-glucarate + H+ → CO2 + 2,5-dioxopentanoate + H2O |
4.2.1.41 |
D-glucarate degradation II,
D-galactarate degradation II |
|
demethylated methyl acceptor + S-adenosyl-L-methionine → S-adenosyl-L-homocysteine + methylated methyl acceptor + H+ |
2.1.1.- |
autoinducer AI-2 biosynthesis I |
|
L-methionine + H2O → methanethiol + 2-oxobutanoate + ammonium |
4.4.1.11 |
dimethyl sulfide biosynthesis from methionine |
|
allantoate + H2O → (S)-ureidoglycolate + urea |
3.5.3.4 |
allantoin degradation to ureidoglycolate I (urea producing) |
|
MCD cofactor chaperone + cytidylyl molybdenum cofactor (trioxo) → a [cytidylyl molybdenum cofactor chaperone]-cytidylyl MoO2(OH)-molybdopterin cofactor |
[none] |
cytidylyl molybdenum cofactor sulfurylation |
|
palmitoyl-[acp] + 2 reduced ferredoxin [iron-sulfur] cluster + oxygen + 2 H+ → palmitoleoyl-[acp] + 2 oxidized ferredoxin [iron-sulfur] cluster + 2 H2O |
1.14.19.2 |
palmitoleate biosynthesis II (plants and bacteria) |
|
a [glycine-cleavage complex H protein] N6-[(R)-lipoyl]-L-lysine + a [lipoyl-carrier protein]-L-lysine → a [lipoyl-carrier protein]-N6-[(R)-lipoyl]-L-lysine + [glycine cleavage system lipoyl-carrier protein]-L-lysine |
2.3.1.200 |
lipoate salvage II |
|
decanoyl-[acp] + 2 reduced ferredoxin [iron-sulfur] cluster + oxygen + 2 H+ → dec-9-enoyl-[acyl-carrier protein] + 2 oxidized ferredoxin [iron-sulfur] cluster + 2 H2O |
[none] |
9-decynoate biosynthesis |
|
dec-9-enoyl-[acyl-carrier protein] + 2 reduced ferredoxin [iron-sulfur] cluster + oxygen + 2 H+ → dec-9-ynoyl-[acyl-carrier protein] + 2 oxidized ferredoxin [iron-sulfur] cluster + 2 H2O |
[none] |
9-decynoate biosynthesis |
|
α-D-ribose 1,5-bisphosphate + ATP → 5-phospho-α-D-ribose 1-diphosphate + ADP |
2.7.4.23 |
(aminomethyl)phosphonate degradation |
|
5-phospho-α-D-ribose 1,2-cyclic phosphate + H2O → α-D-ribose 1,5-bisphosphate + H+ |
3.1.4.55 |
(aminomethyl)phosphonate degradation |
|
α-D-ribose-1-(2-N-acetamidomethylphosphonate) 5-phosphate + S-adenosyl-L-methionine + reduced two electron carrier → 5-phospho-α-D-ribose 1,2-cyclic phosphate + N-methylacetamide + 5'-deoxyadenosine + L-methionine + oxidized electron carrier + H+ |
4.7.1.1 |
(aminomethyl)phosphonate degradation |
|
α-D-ribose 1-(acetamidomethylphosphonate) 5-triphosphate + H2O → α-D-ribose-1-(2-N-acetamidomethylphosphonate) 5-phosphate + diphosphate + H+ |
3.6.1.63 |
(aminomethyl)phosphonate degradation |
|
(acetamidomethyl)phosphonate + ATP → α-D-ribose 1-(acetamidomethylphosphonate) 5-triphosphate + adenine |
2.7.8.37 |
(aminomethyl)phosphonate degradation |
|
acetyl-holo [citrate lyase acyl-carrier protein] + H2O → holo [citrate lyase acyl-carrier protein] + acetate + H+ |
3.1.2.16 |
citrate lyase activation |
|
holo [citrate lyase acyl-carrier protein] + S-acetyl phosphopantetheine → acetyl-holo [citrate lyase acyl-carrier protein] + 4'-phosphopantetheine |
2.3.1.49 |
citrate lyase activation |
|
ADP-L-glycero-β-D-manno-heptose + galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate → core oligosaccharide-lipid A (E. coli K-12 core type) + ADP + H+ |
2.4.1.- |
lipid A-core biosynthesis (E. coli K-12) |
|
(S)-lactaldehyde + NAD+ + H2O → (S)-lactate + NADH + 2 H+ |
1.2.1.22 |
L-rhamnose degradation II,
L-lactaldehyde degradation (aerobic) |
|
(S)-lactaldehyde + NADP+ + H2O → (S)-lactate + NADPH + 2 H+ |
1.2.1.- |
L-rhamnose degradation II |
|
L-rhamnofuranose + NAD(P)+ → L-rhamnono-1,4-lactone + NAD(P)H + H+ |
1.1.1.378 |
L-rhamnose degradation II |
|
L-rhamnofuranose + NAD+ → L-rhamnono-1,4-lactone + NADH + H+ |
1.1.1.173 |
L-rhamnose degradation II |
|
L-rhamnono-1,4-lactone + H2O → L-rhamnonate + H+ |
3.1.1.65 |
L-rhamnose degradation II |
|
ammonium + NAD+ + H2O ← hydroxylamine + NADH + 2 H+ |
1.7.1.10 |
protein S-nitrosylation and denitrosylation |
|
a [protein]-L-cysteine + nitric oxide + oxygen → a [protein] 3-nitrosothio-L-alanine + superoxide + H+ |
[none] |
protein S-nitrosylation and denitrosylation |
|
D-galactosamine 6-phosphate + H2O → D-tagatofuranose 6-phosphate + ammonium |
3.5.99.- |
D-galactosamine and N-acetyl-D-galactosamine degradation |
|
3,4-dihydroxy-5-all-trans-octaprenylbenzoate + S-adenosyl-L-methionine → 3-methoxy-4-hydroxy-5-all-trans-octaprenylbenzoate + S-adenosyl-L-homocysteine + H+ |
2.1.1.114 |
ubiquinol-8 biosynthesis (late decarboxylation) |
|
3-methoxy-4-hydroxy-5-all-trans-octaprenylbenzoate + H+ → 2-methoxy-6-(all-trans-octaprenyl)phenol + CO2 |
4.1.1.- |
ubiquinol-8 biosynthesis (late decarboxylation) |
|
xanthine + NAD+ + H2O ↔ urate + NADH + H+ |
1.17.1.4 |
inosine 5'-phosphate degradation,
adenosine nucleotides degradation II,
guanosine nucleotides degradation III |
|
guanine + H+ + H2O → xanthine + ammonium |
3.5.4.3 |
guanosine nucleotides degradation III |
|
D-glucopyranose 6-phosphate → 1D-myo-inositol 3-monophosphate |
5.5.1.4 |
myo-inositol biosynthesis |
|
2-dehydro-3-deoxy-D-gluconate + ATP → 2-dehydro-3-deoxy-D-gluconate 6-phosphate + ADP + H+ |
2.7.1.45/2.7.1.178 |
4-deoxy-L-threo-hex-4-enopyranuronate degradation,
D-fructuronate degradation |
|
a [TusD sulfur-carrier protein]-S-sulfanyl-L-cysteine + a [TusE sulfur carrier protein]-L-cysteine → a [TusD]-L-cysteine + a [TusE sulfur carrier protein]-S-sulfanylcysteine |
2.8.1.- |
tRNA-uridine 2-thiolation and selenation (bacteria) |
|
an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + a [TusA]-L-cysteine → an [L-cysteine desulfurase]-L-cysteine + a [TusA sulfur-carrier protein]-S-sulfanyl-L-cysteine |
2.8.1.- |
tRNA-uridine 2-thiolation and selenation (bacteria) |
|
3-dehydroshikimate → protocatechuate + H2O |
4.2.1.118 |
quinate degradation I,
shikimate degradation I |
|
N6-(D-fructosyl)-L-lysine ↔ N6-(D-psicosyl)-L-lysine |
5.1.3.41 |
fructoselysine and psicoselysine degradation |
|
N6-(6-phospho-D-fructosyl)-L-lysine + H2O → β-D-glucose 6-phosphate + L-lysine |
[none] |
fructoselysine and psicoselysine degradation |
|
7,8-dihydroneopterin 3'-phosphate + H2O → D-erythro-7,8-dihydroneopterin + phosphate |
3.6.1.- |
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I |
70 pathway holes have been filled by the pathway hole filler, in 376 pathways.
|
Hole-filler |
Hole EC# |
P(has-function) |
All functions of hole-filler |
Pathway(s) requiring this reaction |
|
folA |
1.5.1.3 |
0.964 |
type 3 dihydrofolate reductase |
tetrahydrofolate biosynthesis,
folate transformations III (E. coli) |
|
RS00830 |
none |
0.999 |
D-threonate 4-phosphate dehydrogenase |
D-threonate degradation |
|
RS00830 |
4.1.1.104 |
0.952 |
D-threonate 4-phosphate dehydrogenase |
L-threonate degradation,
D-threonate degradation |
|
thiI |
2.8.1.- |
0.952 |
tRNA 4-thiouridine(8) synthase ThiI |
thiazole component of thiamine diphosphate biosynthesis I |
|
ubiF |
1.14.13.240 |
0.918 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
ubiquinol-8 biosynthesis (early decarboxylation) |
|
galT |
2.7.7.12 |
0.999 |
galactose-1-phosphate uridylyltransferase |
D-galactose degradation I (Leloir pathway) |
|
cmoM |
2.1.1.- |
0.952 |
tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM |
5-(methoxycarbonylmethoxy)uridine biosynthesis |
|
RS05690 |
2.3.1.241 |
0.952 |
LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee |
superpathway of (Kdo)2-lipid A biosynthesis,
(Kdo)2-lipid A biosynthesis I (E. coli) |
|
cobB |
3.5.1.- |
0.952 |
NAD-dependent protein deacylase |
lipoate salvage II |
|
RS06475 |
2.6.1.81 |
0.997 |
aspartate aminotransferase family protein |
L-arginine degradation II (AST pathway) |
|
adhE |
1.2.1.3 |
1.000 |
bifunctional acetaldehyde-CoA/alcohol dehydrogenase |
ethanol degradation II |
|
RS10435 |
none |
0.999 |
precorrin-3B C(17)-methyltransferase |
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) |
|
RS10450 |
2.1.1.196 |
1.000 |
decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase |
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) |
|
RS10475 |
6.3.5.11 |
1.000 |
cobyrinate a,c-diamide synthase |
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) |
|
RS10840 |
1.1.1.356 |
0.956 |
GDP-L-fucose synthase |
GDP-L-colitose biosynthesis |
|
RS11685 |
2.1.1.64 |
0.970 |
bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase |
ubiquinol-8 biosynthesis (late decarboxylation),
ubiquinol-8 biosynthesis (early decarboxylation) |
|
RS11805 |
none |
0.999 |
4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase |
polymyxin resistance |
|
mnmC |
none |
1.000 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC |
tRNA-uridine 2-thiolation and selenation (bacteria) |
|
fadJ |
1.1.1.35 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
1.1.1.35/1.1.1.211 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
1.1.1.35 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
1.1.1.35 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.150 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
5.3.3.8 |
0.971 |
fatty acid oxidation complex subunit alpha FadJ |
fatty acid beta-oxidation I (generic) |
|
fadJ |
1.1.1.35 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
5.3.3.8 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
1.1.1.35 |
0.999 |
fatty acid oxidation complex subunit alpha FadJ |
fatty acid beta-oxidation I (generic) |
|
fadJ |
1.1.1.35 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
1.1.1.35/1.1.1.211 |
1.000 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.994 |
fatty acid oxidation complex subunit alpha FadJ |
oleate beta-oxidation |
|
fadJ |
4.2.1.17 |
0.958 |
fatty acid oxidation complex subunit alpha FadJ |
fatty acid beta-oxidation I (generic) |
|
maeB |
1.1.1.38 |
0.988 |
NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase |
gluconeogenesis I |
|
hscA |
3.6.4.- |
0.971 |
Fe-S protein assembly chaperone HscA |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
hscA |
none |
0.974 |
Fe-S protein assembly chaperone HscA |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
hscA |
none |
0.974 |
Fe-S protein assembly chaperone HscA |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
iscU |
none |
0.982 |
Fe-S cluster assembly scaffold IscU |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
iscS |
2.8.1.- |
1.000 |
cysteine desulfurase |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
iscS |
2.8.1.- |
1.000 |
cysteine desulfurase |
[2Fe-2S] iron-sulfur cluster biosynthesis |
|
gabD |
1.2.1.16 |
0.997 |
NADP-dependent succinate-semialdehyde dehydrogenase |
4-aminobutanoate degradation III |
|
RS15080 |
1.1.1.410 |
0.979 |
SDR family oxidoreductase |
D-erythronate degradation II |
|
RS15090 |
4.1.1.104 |
0.994 |
aldolase |
D-erythronate degradation II |
|
RS15090 |
4.1.1.104 |
0.994 |
aldolase |
L-threonate degradation,
D-threonate degradation |
|
RS15100 |
1.1.1.411 |
0.994 |
NAD(P)-dependent oxidoreductase |
L-threonate degradation |
|
cysI |
1.8.7.1 |
0.989 |
assimilatory sulfite reductase (NADPH) hemoprotein subunit |
assimilatory sulfate reduction IV |
|
kduD |
1.1.1.125 |
0.911 |
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD |
2-deoxy-D-glucose 6-phosphate degradation |
|
ubiH |
1.14.13.- |
0.911 |
2-octaprenyl-6-methoxyphenyl hydroxylase |
ubiquinol-8 biosynthesis (late decarboxylation) |
|
pflB |
2.3.1.- |
0.971 |
formate C-acetyltransferase |
L-threonine degradation I |
|
RS17900 |
2.6.1.17 |
0.952 |
aspartate aminotransferase family protein |
L-lysine biosynthesis I |
|
RS17900 |
2.6.1.11 |
0.991 |
aspartate aminotransferase family protein |
L-ornithine biosynthesis I |
|
cobA |
1.3.1.76 |
1.000 |
uroporphyrinogen-III C-methyltransferase |
cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) |
|
RS18935 |
none |
0.999 |
carbohydrate kinase |
L-ascorbate degradation II (bacterial, aerobic) |
|
waaO |
2.4.1.73 |
1.000 |
lipopolysaccharide 3-alpha-galactosyltransferase |
lipid A-core biosynthesis (E. coli K-12) |
|
RS19175 |
2.4.1.- |
0.999 |
glycosyltransferase family 4 protein |
lipid A-core biosynthesis (E. coli K-12) |
|
waaA |
2.4.99.13 |
1.000 |
lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase |
Kdo transfer to lipid IVA IV (P. putida) |
|
waaA |
2.4.99.13 |
1.000 |
lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase |
Kdo transfer to lipid IVA I (E. coli) |
|
fadB |
5.3.3.8 |
0.996 |
fatty acid oxidation complex subunit alpha FadB |
oleate beta-oxidation |
|
fadB |
5.1.2.3 |
0.971 |
fatty acid oxidation complex subunit alpha FadB |
fatty acid beta-oxidation I (generic) |
|
fadB |
1.1.1.35 |
1.000 |
fatty acid oxidation complex subunit alpha FadB |
oleate beta-oxidation |
|
RS20645 |
3.2.1.199 |
0.999 |
alpha-glucosidase |
sulfoquinovose degradation I |
|
RS20670 |
2.7.1.184 |
0.996 |
sugar kinase |
sulfoquinovose degradation I |
|
fdhD |
none |
0.952 |
formate dehydrogenase accessory sulfurtransferase FdhD |
bis(guanylyl molybdopterin) cofactor sulfurylation |
|
fdhD |
2.8.1.- |
0.952 |
formate dehydrogenase accessory sulfurtransferase FdhD |
bis(guanylyl molybdopterin) cofactor sulfurylation |
|
pfkA |
2.7.1.144 |
0.952 |
6-phosphofructokinase |
D-galactosamine and N-acetyl-D-galactosamine degradation,
galactitol degradation |
|
RS21365 |
2.7.7.73 |
0.962 |
HesA/MoeB/ThiF family protein |
thiazole component of thiamine diphosphate biosynthesis I |
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