Public SmartTables Directory

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A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

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	SmartTable	Description	Organism	Type	Size	Owner	Update Time
1	13 intermediates of central metabolism		MetaCyc	compounds	13	RouteSearch RouteSearch	Tue Jul 03 2018 05:40 pm
2	New SmartTable with NITROGENASE-RXN		MetaCyc	reactions	1	Neeraj Kumar	Tue Jul 03 2018 09:17 am
3	Filtered rows from Ontology - children of class from New SmartTable with Amino Acids Biosynthesis		E. coli K-12 substr. MG1655	pathways	40	Richard Billington	Mon Jul 02 2018 09:29 am
4	Ontology - children of class from New SmartTable with Amino Acids Biosynthesis		E. coli K-12 substr. MG1655	pathways	72	Richard Billington	Mon Jul 02 2018 09:24 am
5	New SmartTable - 2018-06-28T17:07:57-07:00		E. coli B str. REL606	all-genes	84	Peter Midford	Thu Jun 28 2018 04:30 pm
6	K-12/B Strain ortholog pairs from list	Set of 86 E. coli strain K-12 genes with their orthologs to E. coli strain B.	E. coli K-12 substr. MG1655	all-genes	86	Peter Midford	Wed Jun 27 2018 04:10 pm
7	Genes in Escherichia coli K-12 substr. MG1655 mapped to W3110		E. coli K-12 substr. MG1655	all-genes	4501	Jeremy Zucker	Fri Jun 08 2018 12:31 am
8	Genes in Escherichia coli K-12 substr. MG1655 mapped to W3110		E. coli K-12 substr. MG1655	string	24	Jeremy Zucker	Fri Jun 08 2018 12:02 am
9	Peter's gene list (public)		E. coli K-12 substr. MG1655	all-genes	79	Peter Karp	Thu May 31 2018 10:34 am
10	Enriched with FEPCU from FeC Vs NaC during anaerobic growth up-regulated proteins		K. oxytoca 10-5243	pathways	17	Giuseppe Gallo	Wed May 09 2018 09:52 am
11	Enriched with FEPCU from anaerobic Vs aerobic growth on FeC up-regulated proteins		K. oxytoca 10-5243	pathways	22	Giuseppe Gallo	Wed May 09 2018 09:51 am
12	essential genes of Clostridioides difficile R20291 from Dembek et al. (2015)	This is a table generated from a list of unambiguous essential genes in supplementary table S1 of De...	P. difficile R20291	string, all-genes	403	Ingrid Keseler	Fri May 04 2018 01:36 pm
13	BM25113_Gulucose_cum_mass_genome_view		E. coli K-12 substr. MG1655	transcription-units, promoters, all-genes	854	Neeraj Kumar	Wed Apr 18 2018 12:57 am
14	MetaCyc proteins with no genes and no Uniprot links		MetaCyc	compounds, proteins	2449	Ron Caspi	Tue Apr 10 2018 10:07 am
15	All genes of E. coli K-12 substr. MG1655		E. coli K-12 substr. MG1655	all-genes	4665	Peter Midford	Thu Apr 05 2018 05:05 pm
16	All genes of E. coli K-12 substr. MG1655		E. coli K-12 substr. MG1655	all-genes	4665	Peter Midford	Wed Mar 21 2018 01:09 pm
17	All compounds of MetaCyc		MetaCyc	proteins, compounds	14411	Joanna Wolthuis	Wed Mar 07 2018 06:30 am
18	Divisome		E. coli K-12 substr. MG1655	all-genes	4	John Sauls	Mon Mar 05 2018 11:20 am
19	Nitrogen cycling functional genes with and without Mussels	Frozen: CPM-normalized protein clusters (UniRef90) are given for each metagenomic sample (4 without ...		string	1919	ellen black	Mon Jan 29 2018 09:32 am
20	Mussel vs No mussel metagenomic potential (GO)	Relative abundance of protein clusters were mapped with Gene ontology functions.		string	2732	ellen black	Mon Jan 29 2018 09:31 am

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