Live Webinar #1: Overview of the BioCyc.org Microbial Genomes Web Portal
The webinar will discuss the sources from which BioCyc data are derived, the computational inferences applied to those data, the query tools that can be used to retrieve BioCyc data, BioCyc visualization tools, and BioCyc omics data analysis tools.
Webinars on Demand: Download Webinar Videos
The BioCyc on Demand Webinar series introduces basic and advanced features of the BioCyc website and the Pathway Tools software system via a combination of narration and practical demonstration. Webinar videos can be downloaded directly from this site or acquired from our podcast feed as they come out. Download a BioCyc webinar and learn more about BioCyc today.
We have an expanding collection of webinar videos so that you can download, learn, and review at your own pace.
Webinar #1: Introduction to BioCyc
Make the most of BioCyc!
The "Introduction to BioCyc" webinar introduces you to the BioCyc.org site and to the BioCyc collection of thousands of Pathway/Genome Databases. During this webinar, you'll learn about:
"Introduction to BioCyc" is presented here in seven sequential files, giving you a guided tour of the BioCyc collection in concise segments. To download or view, just click on one of the links following each segment's name.
Webinar #2: Using the Structured Advanced Query Page
The "Using the Structured Advanced Query Page" webinar introduces users to the Structured Advanced Query Page, which allows complex queries and queries across one or more databases in the BioCyc collection. In this webinar, you'll learn about:
To download or view, click one of the links below.
Webinar #3:Comparative Tools, Zoomable Metabolic Map, Omics Data Analysis
The "Comparative and Omics Tools in BioCyc" webinar introduces users to many of the advanced tools available on the BioCyc.org website for navigating cellular networks, analyzing large-scale datasets, and comparing organisms. In this webinar, you'll learn about:
"Comparative and Omics Tools in BioCyc" is presented in five separate files. To download or view, click on one of the links following each segment's name.
Webinar #4: Creating a Pathway/Genome Database
This webinar walks you through the process of building a Pathway Tools Pathway/Genome Database (PGDB) from an annotated genome file. Learn how to annotate proteins, build metabolic pathways, make protein complexes, add metabolic reactions and compounds, and assign Gene Ontology (GO) terms to genes. Build a PGDB for your own lab or for the whole scientific community. Topics include:
Webinar #5: Introduction to SmartTables/Web Groups
The following webinar will guide you through SmartTables, formerly known as Web Groups, which allows you to create, upload, share, and compute with your own datasets. The webinar is broken up into parts, ranging from basic operations to more advanced uses such as gene expression analysis and metabolomics. To download or view, click one of the links below.
Webinar #6: Pathway CollagesThis webinar will show you how to use the Pathway Collage Viewer to generate, customize and export high-quality diagrams showing collections of user-specified pathways.
Webinar #7: Omics DashboardThis webinar will show you how to use the Omics Dashboard, a new tool for visualizing omics data.
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