Public SmartTables Directory

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A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

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1Tnseqessential_FBAnonessentials_Mtbrich
M. tuberculosis H37Rv
all-genes
133
Yusuke MinatoTue Apr 16 2019 05:06 pm
2Tn-seq essential and highly conserved genes
M. tuberculosis H37Rv
all-genes
356
Yusuke MinatoTue Apr 16 2019 04:26 pm
3Essential genes in Mtb rich predicted by FBA but not identified by Tn-seq
M. tuberculosis H37Rv
all-genes
42
Yusuke MinatoTue Apr 16 2019 01:47 pm
4Essential genes in all three studies (Griffin et.al. DeJesus et al. Minato et.al.)
M. tuberculosis H37Rv
all-genes
458
Yusuke MinatoTue Apr 16 2019 09:29 am
5Essential genes in Mtb rich_Uncertain_Short_includedTable S2, S3, and S4
M. tuberculosis H37Rv
string, all-genes
601
Yusuke MinatoSun Apr 14 2019 11:15 am
6More essential in Mtb minimal
M. tuberculosis H37Rv
all-genes
130
Yusuke MinatoThu Apr 04 2019 10:33 am
7operon informationDescription: gene name, function, operon name, regulation diagram, transcription factor regulator, b...
E. coli K-12 substr. MG1655
all-genes
95
Amanda WilczekFri Mar 15 2019 11:53 am
8More essential in Mtb rich
M. tuberculosis H37Rv
all-genes
98
Yusuke MinatoMon Feb 25 2019 03:50 pm
9All compounds of MetaCyc
MetaCyc
proteins, compounds
15263
Richard BillingtonFri Feb 22 2019 05:52 pm
10Filtered rows from All reactions of E. coli K-12 substr. MG1655Genes of Enzymatic-Reactions
E. coli K-12 substr. MG1655
reactions
720
Peter MidfordTue Jan 15 2019 11:39 am
11New SmartTable with isoprene
MetaCyc
pathways, compounds
2
Angel MojarroTue Dec 18 2018 10:39 am
12NtrC transcription factor binding sites of E. coli K-12 substr. MG1655Created via the following steps: 1) Start from Special ST of all transcription-factor binding sites ...
E. coli K-12 substr. MG1655
dna-binding-sites
31
Suzanne PaleyTue Dec 18 2018 10:37 am
13New SmartTable with dimethylsulfoniopropanoate
MetaCyc
pathways, compounds
4
Angel MojarroMon Oct 29 2018 02:14 pm
14New SmartTable with methyl chloride
MetaCyc
pathways, compounds
3
Angel MojarroMon Oct 29 2018 02:13 pm
15New SmartTable with dimethyl sulfide
MetaCyc
pathways, compounds
5
Angel MojarroMon Oct 29 2018 02:12 pm
16Example MetaCyc enzymes
MetaCyc
proteins
16
Peter KarpWed Oct 03 2018 08:17 am
17Enriched from anaerobic FeC Vs aerobic FeC_Up Regulated Proteins

pathways
11
Giuseppe GalloFri Sep 28 2018 02:13 am
18Enriched from anaerobic FeC Vs anaerobic NaC_ Up Regulated Proteins

pathways
11
Giuseppe GalloFri Sep 28 2018 02:12 am
19All compounds of MetaCyc
MetaCyc
proteins, compounds
14394
Joanna WolthuisWed Sep 19 2018 02:08 am
20Double-slash columns
P. putida KT2440
all-genes
1551
Jeremy ZuckerWed Aug 22 2018 09:25 am
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